Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 1.3e-151 539.7 271 100.0
Sopen06g011990 Solanum pennellii HOM05D006494 ORTHO05D007787 3.4e-54 216.1 138 80.4
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 4.9e-53 212.2 244 54.1
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 3.1e-52 209.5 244 54.1
Peaxi162Scf00618g00753 Petunia axillaris HOM05D006494 ORTHO05D007787 1.0e-50 204.5 271 50.6
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 8.0e-48 194.9 242 53.3
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 3.9e-42 176.0 241 49.0
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 3.6e-40 169.5 182 59.3
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 6.2e-40 168.7 229 48.0
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 5.1e-34 149.1 242 44.6
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 4.3e-33 146.0 266 42.9
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 1.4e-31 141.0 260 40.0
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 5.2e-31 139.0 260 39.2
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 1.1e-28 131.3 246 40.2
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 3.5e-27 126.3 229 44.1
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 7.8e-27 125.2 233 38.6
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 1.9e-25 120.6 244 39.3
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 2.5e-25 120.2 237 40.5
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 7.3e-25 118.6 240 40.0
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 3.1e-23 113.2 253 34.0
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 3.1e-23 113.2 232 37.5
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 5.2e-23 112.5 234 37.6
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.7e-21 107.5 187 44.4
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 1.7e-21 107.5 254 34.6
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 8.4e-21 105.1 228 36.8
SalBow2G1868 Salvia bowleyana HOM05D006494 ORTHO05D007787 1.1e-20 104.8 229 38.0
SalBow2G2185 Salvia bowleyana HOM05D006494 ORTHO05D007787 1.1e-20 104.8 229 38.0
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 1.4e-20 104.4 204 39.7
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 1.9e-20 104.0 247 33.6
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.9e-20 104.0 246 34.6
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 1.9e-20 104.0 215 38.6
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 4.2e-20 102.8 195 42.1
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 7.1e-20 102.1 246 34.6
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 6.0e-19 99.0 230 35.7
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 6.0e-19 99.0 248 33.9
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 6.0e-19 99.0 217 37.3
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 7.8e-19 98.6 244 36.1
Solyc06g011666.1 Solanum lycopersicum HOM05D006494 ORTHO05D007787 1.0e-18 98.2 120 46.7
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 2.3e-18 97.1 202 36.1
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 2.3e-18 97.1 246 34.1
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 2.3e-18 97.1 232 32.8
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 3.0e-18 96.7 247 34.8
Oeu022606.1 Olea europaea HOM05D006494 ORTHO05D007787 3.0e-18 96.7 216 34.3
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 8.7e-18 95.1 267 33.7
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 1.1e-17 94.7 157 45.2
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.5e-17 94.4 143 46.2
Oeu006795.1 Olea europaea HOM05D006494 ORTHO05D007787 1.9e-17 94.0 231 34.6
PGSC0003DMG400017033 Solanum tuberosum HOM05D006494 ORTHO05D007787 1.9e-17 94.0 92 66.3
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 2.5e-17 93.6 247 34.4
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 5.6e-17 92.4 250 34.0
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 5.6e-17 92.4 248 32.3
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 1.6e-16 90.9 246 32.9
ECA232G4003 Erigeron canadensis HOM05D006494 ORTHO05D007787 2.1e-16 90.5 242 33.9
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 6.2e-16 89.0 194 38.7
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 6.2e-16 89.0 210 37.1
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 4.0e-15 86.3 243 30.5
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 6.9e-15 85.5 234 31.2
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 6.9e-15 85.5 234 31.2
CSS0030697 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 9.0e-15 85.1 145 44.8
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 1.5e-14 84.3 247 35.2
Solyc06g036180.3 Solanum lycopersicum HOM05D006494 ORTHO05D007787 1.5e-14 84.3 44 88.6
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 4.4e-14 82.8 242 31.8
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 7.6e-14 82.0 234 31.6
Lsat_1_v5_gn_9_57501 Lactuca sativa HOM05D006494 ORTHO05D007787 9.9e-14 81.6 129 44.2
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 9.9e-14 81.6 204 32.8
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 1.7e-13 80.9 237 34.2
unitig_46.g18800 Utricularia gibba HOM05D006494 ORTHO05D007787 2.2e-13 80.5 214 32.7
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 2.9e-13 80.1 248 31.0
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 4.9e-13 79.3 238 30.3
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 2.4e-12 77.0 242 30.6
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 3.2e-12 76.6 237 31.6
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 5.4e-12 75.9 202 34.2
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 7.1e-12 75.5 253 33.6
Nn6g33336 Nelumbo nucifera HOM05D006494 ORTHO05D007787 7.1e-12 75.5 192 38.5
RcHm_v2.0_Chr3g0482351 Rosa chinensis HOM05D006494 ORTHO05D007787 1.6e-11 74.3 244 32.8
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 4.6e-11 72.8 221 32.6
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 7.8e-11 72.0 234 34.2
SHI13763 Sapria himalayana HOM05D000481 ORTHO05D003804 1.3e-10 71.2 258 31.4
Sed0015630 Sechium edule HOM05D006494 ORTHO05D007787 4.3e-09 66.2 256 27.3
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 9.6e-09 65.1 237 28.7
Potri.017G113501 Populus trichocarpa HOM05D006494 ORTHO05D007787 2.1e-08 63.9 206 30.6
Sed0010736 Sechium edule HOM05D006494 ORTHO05D007787 2.8e-08 63.5 230 30.4
arahy.Tifrunner.gnm1.ann1.HAQV4X Arachis hypogaea HOM05D006494 ORTHO05D007787 4.8e-08 62.8 222 29.3
Glyma.20G162200 Glycine max HOM05D006494 ORTHO05D007787 6.2e-08 62.4 225 30.2
PSO782G5664 Papaver somniferum HOM05D006494 ORTHO05D007787 1.1e-07 61.6 173 32.9
PSO063G3044 Papaver somniferum HOM05D006494 ORTHO05D007787 1.4e-07 61.2 193 32.1
PSO478G4343 Papaver somniferum HOM05D006494 ORTHO05D007787 1.4e-07 61.2 183 32.2
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 1.8e-07 60.8 191 33.5
arahy.Tifrunner.gnm1.ann1.J3K5XQ Arachis hypogaea HOM05D006494 ORTHO05D007787 3.1e-07 60.1 222 28.8
Sabra04G0078700 Salix brachista HOM05D006494 ORTHO05D007787 4.0e-07 59.7 203 31.5
VMungo0720G0554 Vigna mungo HOM05D006494 ORTHO05D007787 6.9e-07 58.9 265 27.2
Actinidia03131 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.5e-06 57.8 115 37.4
CiPaw.12G091000 Carya illinoinensis HOM05D006494 ORTHO05D007787 2.6e-06 57.0 175 30.3
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 4.5e-06 56.2 207 30.9
Rhsim01G0194300 Rhododendron simsii HOM05D007739 ORTHO05D009838 4.5e-06 56.2 201 30.8


User provided reference genes

Program Settings