Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 5.1e-23 110.2 53 100.0
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 6.2e-21 103.2 51 96.1
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 6.2e-21 103.2 51 96.1
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 6.2e-21 103.2 51 96.1
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 1.8e-20 101.7 51 94.1
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 1.2e-19 99.0 51 92.2
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 7.6e-19 96.3 51 88.2
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 4.9e-18 93.6 52 80.8
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 2.4e-17 91.3 51 80.4
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 3.2e-17 90.9 51 84.3
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 3.2e-17 90.9 51 84.3
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 3.2e-17 90.9 50 84.0
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 7.1e-17 89.7 51 82.4
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 7.1e-17 89.7 51 80.4
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 9.3e-17 89.4 51 82.4
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 9.3e-17 89.4 52 76.9
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 9.3e-17 89.4 52 76.9
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 9.3e-17 89.4 51 80.4
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 9.3e-17 89.4 49 79.6
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 1.2e-16 89.0 51 76.5
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 1.2e-16 89.0 51 80.4
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 1.6e-16 88.6 51 78.4
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 2.1e-16 88.2 51 74.5
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 2.1e-16 88.2 51 80.4
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 2.1e-16 88.2 51 78.4
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 2.1e-16 88.2 51 78.4
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 2.1e-16 88.2 51 78.4
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 2.1e-16 88.2 51 78.4
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 2.7e-16 87.8 51 78.4
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 2.7e-16 87.8 52 76.9
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.7e-16 87.8 51 78.4
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 3.5e-16 87.4 51 78.4
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 3.5e-16 87.4 51 78.4
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 3.5e-16 87.4 51 78.4
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 3.5e-16 87.4 51 78.4
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 3.5e-16 87.4 51 78.4
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 4.6e-16 87.0 52 76.9
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 4.6e-16 87.0 51 78.4
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 4.6e-16 87.0 51 78.4
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 6.0e-16 86.7 51 76.5
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 6.0e-16 86.7 51 78.4
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 7.9e-16 86.3 51 76.5
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 7.9e-16 86.3 51 78.4
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 7.9e-16 86.3 49 79.6
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 1.0e-15 85.9 51 76.5
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 1.0e-15 85.9 51 74.5
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 1.3e-15 85.5 51 76.5
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 1.8e-15 85.1 49 79.6
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 2.3e-15 84.7 51 74.5
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 2.3e-15 84.7 51 74.5
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 2.3e-15 84.7 51 72.5
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 2.3e-15 84.7 51 72.5
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 3.0e-15 84.3 49 77.6
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 3.9e-15 84.0 51 70.6
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 3.9e-15 84.0 51 74.5
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 3.9e-15 84.0 51 72.5
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 5.1e-15 83.6 49 77.6
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 5.1e-15 83.6 51 72.5
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 5.1e-15 83.6 51 72.5
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 5.1e-15 83.6 51 72.5
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 5.1e-15 83.6 51 72.5
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 6.7e-15 83.2 51 72.5
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 8.7e-15 82.8 51 72.5
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 8.7e-15 82.8 51 72.5
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 1.1e-14 82.4 50 76.0
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 1.1e-14 82.4 52 69.2
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 1.9e-14 81.6 50 72.0
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 2.5e-14 81.3 48 79.2
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 2.5e-14 81.3 46 80.4
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 3.3e-14 80.9 50 74.0
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 4.3e-14 80.5 49 73.5
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 7.4e-14 79.7 50 74.0
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 9.6e-14 79.3 50 72.0
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 3.7e-13 77.4 64 62.5
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 3.7e-13 77.4 51 74.5
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 4.8e-13 77.0 61 62.3
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 8.1e-13 76.3 50 68.0
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.1e-12 75.9 51 70.6
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 1.4e-12 75.5 49 73.5
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 1.8e-12 75.1 54 68.5
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 3.1e-12 74.3 64 59.4
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 3.1e-12 74.3 50 66.0
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 5.3e-12 73.6 51 72.5
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 3.4e-11 70.9 51 66.7
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 3.4e-11 70.9 52 63.5
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 1.7e-10 68.6 78 50.0
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 2.2e-10 68.2 49 63.3
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 4.9e-10 67.0 36 80.6
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 6.4e-10 66.6 46 63.0
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 1.4e-09 65.5 37 75.7
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.4e-09 65.5 37 78.4
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 2.4e-09 64.7 43 67.4
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 4.2e-09 63.9 45 62.2
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 4.2e-09 63.9 36 77.8
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 5.5e-09 63.5 35 80.0
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 9.3e-09 62.8 34 79.4
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 1.6e-08 62.0 35 82.9
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 2.1e-08 61.6 35 77.1
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 3.5e-08 60.8 34 79.4
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 4.6e-08 60.5 35 74.3
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 6.0e-08 60.1 42 64.3
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 7.9e-08 59.7 36 75.0
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 7.9e-08 59.7 37 70.3
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 1.0e-07 59.3 36 72.2
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 1.3e-07 58.9 35 77.1
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 5.1e-07 57.0 35 71.4
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.5e-06 55.5 35 68.6
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 5.6e-06 53.5 35 71.4
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 7.4e-06 53.1 36 63.9


User provided reference genes

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