Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400029886 Solanum tuberosum HOM05D003079 ORTHO05D003461 5.0e-35 150.6 78 100.0
Sopen07g034350 Solanum pennellii HOM05D003079 ORTHO05D003461 2.3e-32 141.7 78 93.6
Solyc07g066170.4 Solanum lycopersicum HOM05D003079 ORTHO05D003461 5.2e-32 140.6 78 92.3
CAN.G623.75 Capsicum annuum HOM05D003079 ORTHO05D003461 8.5e-27 123.2 79 82.3
Nitab4.5_0000152g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.0e-24 116.3 78 76.9
Peaxi162Scf00232g00614 Petunia axillaris HOM05D003079 ORTHO05D003461 7.5e-23 110.2 78 73.1
Nitab4.5_0009408g0020 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.7e-22 109.0 78 74.4
PGSC0003DMG400022146 Solanum tuberosum HOM05D003079 ORTHO05D003461 2.9e-19 98.2 54 88.9
Nitab4.5_0002216g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 6.6e-19 97.1 78 67.9
Nitab4.5_0003570g0050 Nicotiana tabacum HOM05D003079 ORTHO05D003461 8.6e-19 96.7 78 67.9
Lj8C183T12 Lonicera japonica HOM05D003079 ORTHO05D003461 2.3e-16 88.6 78 56.4
Nitab4.5_0000611g0170 Nicotiana tabacum HOM05D003079 ORTHO05D003461 5.2e-16 87.4 78 56.4
MSTRG.13045 Avicennia marina HOM05D003079 ORTHO05D003461 6.8e-16 87.0 73 57.5
Nitab4.5_0001622g0150 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.2e-15 86.3 78 56.4
Cc05_g15720 Coffea canephora HOM05D003079 ORTHO05D003461 4.4e-15 84.3 74 51.4
CAN.G492.58 Capsicum annuum HOM05D003079 ORTHO05D003461 1.7e-14 82.4 79 54.4
Migut.M01581 Erythranthe guttata HOM05D003079 ORTHO05D003461 1.4e-13 79.3 80 51.2
Sopen10g001680 Solanum pennellii HOM05D003079 ORTHO05D003461 1.8e-13 79.0 78 51.3
Potri.001G472000 Populus trichocarpa HOM05D003079 ORTHO05D003461 4.1e-13 77.8 78 48.7
TAR611G0001 Trochodendron aralioides HOM05D003079 ORTHO05D003461 4.1e-13 77.8 78 50.0
PGSC0003DMG400015038 Solanum tuberosum HOM05D003079 ORTHO05D003461 1.6e-12 75.9 47 85.1
Duzib170G0955 Durio zibethinus HOM05D003079 ORTHO05D003461 2.7e-12 75.1 74 48.6
SGA_v2.0_scaffold186G40233 Striga asiatica HOM05D003079 ORTHO05D003461 3.5e-12 74.7 78 51.3
Duzib213G0264 Durio zibethinus HOM05D003079 ORTHO05D003461 5.9e-12 73.9 78 50.0
RcHm_v2.0_Chr5g0074601 Rosa chinensis HOM05D003079 ORTHO05D003461 1.0e-11 73.2 78 44.9
Thecc.07G001500 Theobroma cacao HOM05D003079 ORTHO05D003461 1.0e-11 73.2 78 47.4
Potri.011G169000 Populus trichocarpa HOM05D003079 ORTHO05D003461 1.7e-11 72.4 78 47.4
GSVIVG01014846001 Vitis vinifera HOM05D003079 ORTHO05D003461 2.3e-11 72.0 78 46.2
Hma1.2p1_0193F.1_g084340 Hydrangea macrophylla HOM05D003079 ORTHO05D003461 5.0e-11 70.9 78 51.3
Manes.05G204700 Manihot esculenta HOM05D003079 ORTHO05D003461 5.0e-11 70.9 78 47.4
TWI14G0136 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 5.0e-11 70.9 78 44.9
TWI39G1230 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 5.0e-11 70.9 78 44.9
Nn1g07629 Nelumbo nucifera HOM05D003079 ORTHO05D003461 6.6e-11 70.5 78 44.9
Oeu006261.2 Olea europaea HOM05D003079 ORTHO05D003461 6.6e-11 70.5 78 43.6
PGSC0003DMG400008693 Solanum tuberosum HOM05D003079 ORTHO05D003461 8.6e-11 70.1 78 48.7
MSTRG.16132 Avicennia marina HOM05D003079 ORTHO05D003461 1.1e-10 69.7 78 48.7
Oeu015272.1 Olea europaea HOM05D003079 ORTHO05D003461 1.1e-10 69.7 78 44.9
SGA_v2.0_scaffold7G03549 Striga asiatica HOM05D003079 ORTHO05D003461 1.1e-10 69.7 71 52.1
Duzib268G0697 Durio zibethinus HOM05D003079 ORTHO05D003461 1.9e-10 68.9 78 44.9
TAR627G0159 Trochodendron aralioides HOM05D003079 ORTHO05D003461 1.9e-10 68.9 78 46.2
Eucgr.F03644 Eucalyptus grandis HOM05D003079 ORTHO05D003461 2.5e-10 68.6 72 51.4
MBI15_g44396_MAGBIO Magnolia biondii HOM05D003079 ORTHO05D003461 2.5e-10 68.6 74 50.0
Solyc01g056200.1 Solanum lycopersicum HOM05D003079 ORTHO05D003461 7.3e-10 67.0 42 83.3
MSTRG.14525 Avicennia marina HOM05D003079 ORTHO05D003461 1.2e-09 66.2 78 48.7
Oeu052884.2 Olea europaea HOM05D003079 ORTHO05D003461 2.8e-09 65.1 74 43.2
TWI38G1795 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 2.8e-09 65.1 78 41.0
HPP92_007490 Vanilla planifolia HOM05D003079 ORTHO05D003461 3.6e-09 64.7 74 47.3
QL08p000493 Quercus lobata HOM05D003079 ORTHO05D003461 4.7e-09 64.3 77 41.6
Sc03g0011780 Simmondsia chinensis HOM05D003079 ORTHO05D003461 4.7e-09 64.3 77 40.3
Oeu052026.1 Olea europaea HOM05D003079 ORTHO05D003461 6.2e-09 63.9 55 54.5
FAN16G0740 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.0e-08 63.2 78 41.0
Gohir.D13G131800 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.0e-08 63.2 78 43.6
Gorai.013G147800 Gossypium raimondii HOM05D003079 ORTHO05D003461 1.0e-08 63.2 78 43.6
ClCG00G001200 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.8e-08 62.4 78 44.9
ClCG10G003930 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.8e-08 62.4 78 44.9
PSO063G6668 Papaver somniferum HOM05D003079 ORTHO05D003461 1.8e-08 62.4 78 42.3
SGA_v2.0_scaffold92G28159 Striga asiatica HOM05D003079 ORTHO05D003461 1.8e-08 62.4 74 41.9
ClCG10G003820 Citrullus lanatus HOM05D003079 ORTHO05D003461 5.2e-08 60.8 74 45.9
Oeu005543.1 Olea europaea HOM05D003079 ORTHO05D003461 5.2e-08 60.8 54 53.7
MELO3C014061.2 Cucumis melo HOM05D003079 ORTHO05D003461 6.8e-08 60.5 74 45.9
Gohir.A13G128400 Gossypium hirsutum HOM05D003079 ORTHO05D003461 6.8e-08 60.5 78 42.3
FAN21G1152 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.5e-07 59.3 78 38.5
FAN25G3298 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.5e-07 59.3 80 38.8
vmacro11641 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 1.5e-07 59.3 75 45.3
FvH4_3g41590 Fragaria vesca HOM05D003079 ORTHO05D003461 2.0e-07 58.9 78 38.5
FAN11G0995 Fragaria x ananassa HOM05D003079 ORTHO05D003461 2.0e-07 58.9 78 38.5
Phvul.L001609 Phaseolus vulgaris HOM05D003079 ORTHO05D003461 2.0e-07 58.9 78 42.3
Sed0022199 Sechium edule HOM05D003079 ORTHO05D003461 2.0e-07 58.9 78 42.3
ATR0751G103 Amborella trichopoda HOM05D003079 ORTHO05D003461 5.8e-07 57.4 78 42.3
PSO782G1655 Papaver somniferum HOM05D003079 ORTHO05D003461 9.8e-07 56.6 78 41.0
Prupe.6G035500 Prunus persica HOM05D003079 ORTHO05D003461 2.9e-06 55.1 78 39.7
Ciclev10007777m.g Citrus clementina HOM05D003079 ORTHO05D003461 4.9e-06 54.3 78 35.9


User provided reference genes

Program Settings