Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 3.6e-61 238.0 119 100.0
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 2.9e-58 228.4 119 95.8
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 6.4e-58 227.3 119 95.0
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 1.9e-54 215.7 119 90.8
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 3.1e-52 208.4 119 89.9
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 7.1e-41 170.6 100 85.0
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 7.9e-40 167.2 109 76.1
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 3.9e-39 164.9 112 72.3
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 5.1e-39 164.5 114 69.3
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 1.9e-38 162.5 112 70.5
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 2.5e-38 162.2 107 72.9
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 3.3e-38 161.8 114 71.9
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 3.3e-38 161.8 96 76.0
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 5.6e-38 161.0 113 72.6
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 2.1e-37 159.1 109 71.6
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 3.7e-37 158.3 102 76.5
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 4.8e-37 157.9 110 70.0
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 6.2e-37 157.5 102 74.5
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 6.2e-37 157.5 94 79.8
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 8.1e-37 157.1 91 81.3
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 8.1e-37 157.1 94 76.6
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 1.4e-36 156.4 112 66.1
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 1.8e-36 156.0 100 75.0
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 2.4e-36 155.6 108 70.4
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 4.0e-36 154.8 110 67.3
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 4.0e-36 154.8 103 74.8
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 5.3e-36 154.5 94 77.7
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 5.3e-36 154.5 93 78.5
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 6.9e-36 154.1 101 73.3
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 6.9e-36 154.1 115 67.0
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 6.9e-36 154.1 110 64.5
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 6.9e-36 154.1 110 66.4
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 9.0e-36 153.7 102 70.6
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 9.0e-36 153.7 108 65.7
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 9.0e-36 153.7 101 74.3
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 1.2e-35 153.3 116 63.8
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 1.2e-35 153.3 111 66.7
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 2.0e-35 152.5 110 66.4
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 2.6e-35 152.1 108 64.8
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 2.6e-35 152.1 99 70.7
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 3.4e-35 151.8 106 65.1
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 3.4e-35 151.8 110 68.2
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 4.5e-35 151.4 115 62.6
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 4.5e-35 151.4 103 71.8
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 4.5e-35 151.4 95 72.6
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 1.0e-34 150.2 113 63.7
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 1.0e-34 150.2 91 76.9
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 1.3e-34 149.8 90 77.8
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 1.7e-34 149.4 114 66.7
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 3.8e-34 148.3 112 65.2
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 3.8e-34 148.3 86 80.2
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 3.8e-34 148.3 95 69.5
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 3.8e-34 148.3 112 61.6
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 4.9e-34 147.9 100 69.0
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 1.4e-33 146.4 87 79.3
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 1.9e-33 146.0 110 66.4
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 1.9e-33 146.0 115 61.7
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 1.9e-33 146.0 90 76.7
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 1.9e-33 146.0 89 75.3
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 2.5e-33 145.6 115 61.7
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 3.2e-33 145.2 89 75.3
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 4.2e-33 144.8 89 75.3
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 4.2e-33 144.8 89 75.3
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 5.5e-33 144.4 89 74.2
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 5.5e-33 144.4 89 74.2
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 5.5e-33 144.4 89 74.2
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 5.5e-33 144.4 110 64.5
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 5.5e-33 144.4 111 65.8
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 7.1e-33 144.1 89 74.2
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 7.1e-33 144.1 89 74.2
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 7.1e-33 144.1 89 74.2
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 7.1e-33 144.1 89 74.2
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 7.1e-33 144.1 89 74.2
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 7.1e-33 144.1 89 74.2
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 7.1e-33 144.1 89 74.2
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 7.1e-33 144.1 89 75.3
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 9.3e-33 143.7 99 69.7
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 1.2e-32 143.3 92 71.7
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 1.6e-32 142.9 93 71.0
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 6.0e-32 141.0 115 60.9
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 7.9e-32 140.6 80 81.2
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 1.0e-31 140.2 101 65.3
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 1.8e-31 139.4 94 69.1
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.8e-31 139.4 90 72.2
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 2.3e-31 139.0 93 68.8
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 1.5e-30 136.3 105 68.6
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 1.5e-30 136.3 76 82.9
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 1.9e-30 136.0 76 81.6
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 3.7e-29 131.7 76 78.9
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 3.7e-29 131.7 116 65.5
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 4.1e-28 128.3 97 61.9
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 6.9e-28 127.5 92 63.0
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 1.2e-27 126.7 76 78.9
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 3.4e-27 125.2 90 63.3
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 4.5e-27 124.8 106 58.5
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 7.6e-27 124.0 77 76.6
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 1.0e-26 123.6 77 72.7
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 1.7e-26 122.9 84 69.0
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 1.4e-25 119.8 90 68.9
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 7.2e-25 117.5 71 78.9
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 1.8e-23 112.8 111 48.6
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 1.3e-21 106.7 97 53.6
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 3.1e-20 102.1 95 50.5
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 6.9e-20 100.9 106 46.2
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 8.8e-15 84.0 76 52.6
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 3.7e-13 78.6 110 37.3
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 1.7e-10 69.7 91 42.9


User provided reference genes

Program Settings