Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400029583 Solanum tuberosum HOM05D007770 ORTHO05D009827 6.0e-56 220.7 119 100.0
Solyc08g069230.3 Solanum lycopersicum HOM05D007770 ORTHO05D009827 9.0e-52 206.8 119 91.6
Sopen08g022850 Solanum pennellii HOM05D007770 ORTHO05D009827 2.0e-51 205.7 119 91.6
CAN.G480.16 Capsicum annuum HOM05D007770 ORTHO05D009827 7.9e-48 193.7 119 87.4
Nitab4.5_0001942g0170 Nicotiana tabacum HOM05D007770 ORTHO05D009827 1.6e-45 186.0 119 85.7
Nitab4.5_0000970g0130 Nicotiana tabacum HOM05D007770 ORTHO05D009827 1.4e-36 156.4 95 76.8
MSTRG.13938 Avicennia marina HOM05D007770 ORTHO05D009827 5.7e-30 134.4 119 51.3
Dinv13246 Davidia involucrata HOM05D007770 ORTHO05D009827 3.1e-28 128.6 123 55.3
FAN20G1378 Fragaria x ananassa HOM05D007770 ORTHO05D009827 8.4e-26 120.6 98 68.4
GSVIVG01035563001 Vitis vinifera HOM05D007770 ORTHO05D009827 8.4e-26 120.6 89 73.0
QL12p025908 Quercus lobata HOM05D007770 ORTHO05D009827 1.1e-25 120.2 130 49.2
FAN27G1234 Fragaria x ananassa HOM05D007770 ORTHO05D009827 1.9e-25 119.4 98 56.1
Thecc.09G003100 Theobroma cacao HOM05D007770 ORTHO05D009827 3.2e-25 118.6 91 70.3
FvH4_2g36440 Fragaria vesca HOM05D007770 ORTHO05D009827 4.2e-25 118.2 90 60.0
Duzib150G1352 Durio zibethinus HOM05D007770 ORTHO05D009827 7.2e-25 117.5 107 51.4
TWI34G0832 Tripterygium wilfordii HOM05D007770 ORTHO05D009827 7.2e-25 117.5 84 65.5
TAR625G0611 Trochodendron aralioides HOM05D007770 ORTHO05D009827 2.7e-24 115.5 118 50.0
BcaC02g08464 Brassica carinata HOM05D007770 ORTHO05D009827 3.5e-24 115.2 99 68.7
Lsat_1_v5_gn_3_26540 Lactuca sativa HOM05D007770 ORTHO05D009827 3.5e-24 115.2 100 54.0
Carub.0004s0375 Capsella rubella HOM05D007770 ORTHO05D009827 6.1e-24 114.4 102 54.9
Gohir.D06G109700 Gossypium hirsutum HOM05D007770 ORTHO05D009827 6.1e-24 114.4 94 68.1
Gorai.010G124500 Gossypium raimondii HOM05D007770 ORTHO05D009827 6.1e-24 114.4 117 60.7
AT2G24395 Arabidopsis thaliana HOM05D007770 ORTHO05D009827 7.9e-24 114.0 99 54.5
MD08G1124100 Malus domestica HOM05D007770 ORTHO05D009827 7.9e-24 114.0 92 56.5
Sp4g03420 Schrenkiella parvula HOM05D007770 ORTHO05D009827 7.9e-24 114.0 103 53.4
Nn8g41062 Nelumbo nucifera HOM05D007770 ORTHO05D009827 1.0e-23 113.6 123 49.6
Manes.16G137500 Manihot esculenta HOM05D007770 ORTHO05D009827 1.3e-23 113.2 89 61.8
BolC4t26952H Brassica oleracea HOM05D007770 ORTHO05D009827 1.8e-23 112.8 103 65.0
Ciclev10010266m.g Citrus clementina HOM05D007770 ORTHO05D009827 1.8e-23 112.8 79 59.5
CARHR117660 Cardamine hirsuta HOM05D007770 ORTHO05D009827 2.3e-23 112.5 97 55.7
DCAR_000666 Daucus carota HOM05D007770 ORTHO05D009827 3.0e-23 112.1 89 70.8
AL4G14830 Arabidopsis lyrata HOM05D007770 ORTHO05D009827 3.9e-23 111.7 101 53.5
Prupe.1G455800 Prunus persica HOM05D007770 ORTHO05D009827 3.9e-23 111.7 93 68.8
Atru.chr7.2683 Acer truncatum HOM05D007770 ORTHO05D009827 6.7e-23 110.9 84 57.1
EL10Ac2g03698 Beta vulgaris HOM05D007770 ORTHO05D009827 8.7e-23 110.5 84 67.9
Thhalv10000372m.g Eutrema salsugineum HOM05D007770 ORTHO05D009827 8.7e-23 110.5 95 56.8
A04p18710 Brassica napus HOM05D007770 ORTHO05D009827 1.5e-22 109.8 98 64.3
CiPaw.08G021600 Carya illinoinensis HOM05D007770 ORTHO05D009827 1.5e-22 109.8 116 50.0
Aa31sc132G30 Aethionema arabicum HOM05D007770 ORTHO05D009827 1.9e-22 109.4 105 48.6
Lj1g0002810 Lotus japonicus HOM05D007770 ORTHO05D009827 2.5e-22 109.0 88 58.0
BraA04t17481Z Brassica rapa HOM05D007770 ORTHO05D009827 3.3e-22 108.6 97 64.9
arahy.Tifrunner.gnm1.ann1.DWH8JW Arachis hypogaea HOM05D007770 ORTHO05D009827 4.3e-22 108.2 80 71.2
arahy.Tifrunner.gnm1.ann1.SE3NL1 Arachis hypogaea HOM05D007770 ORTHO05D009827 4.3e-22 108.2 80 71.2
Migut.E01418 Erythranthe guttata HOM05D007770 ORTHO05D009827 4.3e-22 108.2 85 50.6
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 7.4e-22 107.5 73 69.9
Potri.006G278250 Populus trichocarpa HOM05D007770 ORTHO05D009827 7.4e-22 107.5 89 68.5
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 9.7e-22 107.1 73 63.0
CANSAT56G0680 Cannabis sativa HOM05D007770 ORTHO05D009827 9.7e-22 107.1 74 62.2
Phvul.009G103700 Phaseolus vulgaris HOM05D007770 ORTHO05D009827 1.3e-21 106.7 116 44.0
HanXRQChr17g0539271 Helianthus annuus HOM05D007770 ORTHO05D009827 1.6e-21 106.3 98 58.2
RcHm_v2.0_Chr6g0305461 Rosa chinensis HOM05D007770 ORTHO05D009827 2.8e-21 105.5 99 65.7
SalBow8G5425 Salvia bowleyana HOM05D007770 ORTHO05D009827 2.8e-21 105.5 105 61.9
CDE02G4318 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 3.7e-21 105.1 80 73.8
Eucgr.C04242 Eucalyptus grandis HOM05D007770 ORTHO05D009827 3.7e-21 105.1 82 54.9
C04p54000 Brassica napus HOM05D007770 ORTHO05D009827 1.1e-20 103.6 100 64.0
PSO063G4434 Papaver somniferum HOM05D007770 ORTHO05D009827 1.1e-20 103.6 84 52.4
ECA246G2424 Erigeron canadensis HOM05D007770 ORTHO05D009827 2.4e-20 102.4 82 56.1
VMungo1309G0540 Vigna mungo HOM05D007770 ORTHO05D009827 3.1e-20 102.1 83 49.4
Cc08_g05750 Coffea canephora HOM05D007770 ORTHO05D009827 5.3e-20 101.3 72 59.7
Aqoxy7G02675 Aquilegia oxysepala HOM05D007770 ORTHO05D009827 9.0e-20 100.5 109 43.1
Sabra06G0215900 Salix brachista HOM05D007770 ORTHO05D009827 9.0e-20 100.5 93 65.6
CDE06G0935 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 1.2e-19 100.1 80 72.5
Glyma.04G077900 Glycine max HOM05D007770 ORTHO05D009827 7.7e-19 97.4 68 63.2
CANSAT56G1809 Cannabis sativa HOM05D007770 ORTHO05D009827 2.2e-18 95.9 54 74.1
TPR.G12312 Trifolium pratense HOM05D007770 ORTHO05D009827 8.5e-18 94.0 78 47.4
Medtr3g109170 Medicago truncatula HOM05D007770 ORTHO05D009827 1.1e-17 93.6 78 48.7
FAN15G1940 Fragaria x ananassa HOM05D007770 ORTHO05D009827 4.2e-17 91.7 57 66.7
Psat5g024680 Pisum sativum HOM05D007770 ORTHO05D009827 5.5e-17 91.3 80 47.5
Gohir.A06G107400 Gossypium hirsutum HOM05D007770 ORTHO05D009827 2.1e-16 89.4 84 53.6
Sed0000657 Sechium edule HOM05D007770 ORTHO05D009827 2.7e-16 89.0 79 49.4
arahy.Tifrunner.gnm1.ann1.T2QDAL Arachis hypogaea HOM05D007770 ORTHO05D009827 3.6e-16 88.6 52 65.4
MELO3C011169.2 Cucumis melo HOM05D007770 ORTHO05D009827 6.1e-16 87.8 58 60.3
ClCG08G012500 Citrullus lanatus HOM05D007770 ORTHO05D009827 3.0e-15 85.5 58 58.6
Pp3c27_7640 Physcomitrium patens HOM05D007770 ORTHO05D009827 8.8e-15 84.0 72 48.6
Lalb_Chr23g0269281 Lupinus albus HOM05D007770 ORTHO05D009827 1.5e-14 83.2 80 63.8
HPP92_017098 Vanilla planifolia HOM05D007770 ORTHO05D009827 2.0e-14 82.8 63 54.0
Peaxi162Scf00213g00947 Petunia axillaris HOM05D007770 ORTHO05D009827 2.5e-14 82.4 123 41.5
CsaV3_2G031200 Cucumis sativus L. HOM05D007770 ORTHO05D009827 3.3e-14 82.0 56 58.9
MD15G1102800 Malus domestica HOM05D007770 ORTHO05D009827 9.1e-12 73.9 93 43.0
Os08g0520850 Oryza sativa ssp. japonica HOM05D007770 ORTHO05D009827 1.2e-11 73.6 39 71.8
unitig_747.g21378 Utricularia gibba HOM05D007770 ORTHO05D009827 2.6e-11 72.4 104 35.6
Mapoly0035s0047 Marchantia polymorpha HOM05D007770 ORTHO05D009827 2.2e-10 69.3 67 41.8
CBR_g3948 Chara braunii HOM05D007770 ORTHO05D009827 3.8e-10 68.6 63 46.0
HPP92_017108 Vanilla planifolia HOM05D007770 ORTHO05D009827 1.9e-09 66.2 36 66.7
MD08G1226400 Malus domestica HOM05D007770 ORTHO05D009827 9.4e-09 63.9 33 81.8
Glyma.06G079000 Glycine max HOM05D007770 ORTHO05D009827 1.2e-08 63.5 30 76.7
AagrBONN_evm.TU.Sc2ySwM_228.4990 Anthoceros agrestis HOM05D007770 ORTHO05D009827 2.1e-08 62.8 83 36.1
Zm00001eb035580 Zea mays HOM05D007770 ORTHO05D009827 2.1e-08 62.8 35 68.6
Actinidia25745 Actinidia chinensis HOM05D007770 ORTHO05D009827 2.3e-07 59.3 52 51.9


User provided reference genes

Program Settings