Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400029352 Solanum tuberosum HOM05D003732 ORTHO05D004965 7.9e-39 163.3 83 100.0
PGSC0003DMG402029257 Solanum tuberosum HOM05D003732 ORTHO05D004965 1.6e-31 139.0 82 84.1
Solyc12g096780.2 Solanum lycopersicum HOM05D003732 ORTHO05D004965 2.7e-31 138.3 82 85.4
PGSC0003DMG401029354 Solanum tuberosum HOM05D003732 ORTHO05D004965 2.7e-31 138.3 78 91.0
Sopen12g032610 Solanum pennellii HOM05D003732 ORTHO05D004965 2.3e-30 135.2 82 84.1
CAN.G84.24 Capsicum annuum HOM05D003732 ORTHO05D004965 3.0e-30 134.8 82 81.7
Nitab4.5_0004465g0010 Nicotiana tabacum HOM05D003732 ORTHO05D004965 5.7e-29 130.6 82 78.0
Sopen11g030320 Solanum pennellii HOM05D003732 ORTHO05D004965 7.7e-26 120.2 82 73.2
CAN.G84.25 Capsicum annuum HOM05D003732 ORTHO05D004965 2.2e-25 118.6 82 72.0
CAN.G84.23 Capsicum annuum HOM05D003732 ORTHO05D004965 2.9e-25 118.2 83 73.5
Nitab4.5_0004465g0020 Nicotiana tabacum HOM05D003732 ORTHO05D004965 5.0e-25 117.5 81 71.6
Solyc11g072640.3 Solanum lycopersicum HOM05D003732 ORTHO05D004965 6.5e-25 117.1 82 70.7
Sopen11g030310 Solanum pennellii HOM05D003732 ORTHO05D004965 6.5e-25 117.1 82 70.7
PGSC0003DMG400025357 Solanum tuberosum HOM05D003732 ORTHO05D004965 6.5e-25 117.1 82 70.7
Migut.D02165 Erythranthe guttata HOM05D003732 ORTHO05D004965 8.5e-25 116.7 82 69.5
SGA_v2.0_scaffold316G48397 Striga asiatica HOM05D003732 ORTHO05D004965 8.5e-25 116.7 82 68.3
CsaV3_1G012760 Cucumis sativus L. HOM05D003732 ORTHO05D004965 1.5e-24 115.9 82 67.1
SalBow3G0013 Salvia bowleyana HOM05D003732 ORTHO05D004965 1.5e-24 115.9 82 69.5
Duzib168G0288 Durio zibethinus HOM05D003732 ORTHO05D004965 1.9e-24 115.5 82 68.3
Peaxi162Scf00616g00312 Petunia axillaris HOM05D003732 ORTHO05D004965 1.9e-24 115.5 82 69.5
Haze_23969 Corylus avellana HOM05D003732 ORTHO05D004965 2.5e-24 115.2 82 70.7
COL.COLO4_18395 Corchorus olitorius HOM05D003732 ORTHO05D004965 3.2e-24 114.8 82 68.3
MELO3C026850.2 Cucumis melo HOM05D003732 ORTHO05D004965 3.2e-24 114.8 82 67.1
FvH4_3g34120 Fragaria vesca HOM05D003732 ORTHO05D004965 5.5e-24 114.0 82 67.1
CiPaw.13G104000 Carya illinoinensis HOM05D003732 ORTHO05D004965 7.2e-24 113.6 82 67.1
QL01p035526 Quercus lobata HOM05D003732 ORTHO05D004965 7.2e-24 113.6 82 68.3
Cfa011398 Carpinus fangiana HOM05D003732 ORTHO05D004965 9.4e-24 113.2 82 69.5
Gorai.003G139600 Gossypium raimondii HOM05D003732 ORTHO05D004965 9.4e-24 113.2 82 68.3
Oeu051855.1 Olea europaea HOM05D003732 ORTHO05D004965 1.2e-23 112.8 82 70.7
Nitab4.5_0003743g0020 Nicotiana tabacum HOM05D003732 ORTHO05D004965 1.6e-23 112.5 81 67.9
SEGI_28331 Sequoiadendron giganteum HOM05D003732 ORTHO05D004965 1.6e-23 112.5 81 64.2
CSS0010801 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 2.1e-23 112.1 82 68.3
CSS0050219 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 2.1e-23 112.1 82 68.3
ClCG03G002100 Citrullus lanatus HOM05D003732 ORTHO05D004965 2.1e-23 112.1 82 65.9
MD03G1107400 Malus domestica HOM05D003732 ORTHO05D004965 2.1e-23 112.1 82 67.1
RcHm_v2.0_Chr5g0061771 Rosa chinensis HOM05D003732 ORTHO05D004965 2.1e-23 112.1 82 65.9
HanXRQChr05g0133971 Helianthus annuus HOM05D003732 ORTHO05D004965 2.7e-23 111.7 82 64.6
Nitab4.5_0004465g0030 Nicotiana tabacum HOM05D003732 ORTHO05D004965 2.7e-23 111.7 81 67.9
ECA236G0640 Erigeron canadensis HOM05D003732 ORTHO05D004965 3.6e-23 111.3 82 64.6
Gohir.A03G035700 Gossypium hirsutum HOM05D003732 ORTHO05D004965 3.6e-23 111.3 82 67.1
Gohir.D03G132600 Gossypium hirsutum HOM05D003732 ORTHO05D004965 3.6e-23 111.3 82 67.1
Hma1.2p1_2042F.1_g312240 Hydrangea macrophylla HOM05D003732 ORTHO05D004965 3.6e-23 111.3 82 67.1
Sc06g0008130 Simmondsia chinensis HOM05D003732 ORTHO05D004965 3.6e-23 111.3 82 63.4
TPR.G11613 Trifolium pratense HOM05D003732 ORTHO05D004965 3.6e-23 111.3 82 67.1
vmacro14491 Vaccinium macrocarpon HOM05D003732 ORTHO05D004965 4.7e-23 110.9 75 69.3
VMungo1080G0314 Vigna mungo HOM05D003732 ORTHO05D004965 4.7e-23 110.9 82 68.3
GSVIVG01025089001 Vitis vinifera HOM05D003732 ORTHO05D004965 4.7e-23 110.9 82 68.3
EL10Ac7g15885 Beta vulgaris HOM05D003732 ORTHO05D004965 6.1e-23 110.5 82 63.4
Thhalv10025585m.g Eutrema salsugineum HOM05D003732 ORTHO05D004965 6.1e-23 110.5 82 67.1
Lsat_1_v5_gn_8_76381 Lactuca sativa HOM05D003732 ORTHO05D004965 6.1e-23 110.5 82 65.9
Prupe.6G090200 Prunus persica HOM05D003732 ORTHO05D004965 6.1e-23 110.5 82 67.1
Rhsim01G0223000 Rhododendron simsii HOM05D003732 ORTHO05D004965 6.1e-23 110.5 75 70.7
Ciclev10028610m.g Citrus clementina HOM05D003732 ORTHO05D004965 8.0e-23 110.2 82 67.1
CDE09G1079 Ceratophyllum demersum HOM05D003732 ORTHO05D004965 1.0e-22 109.8 82 63.4
AUR62036244 Chenopodium quinoa HOM05D003732 ORTHO05D004965 1.0e-22 109.8 82 63.4
Cc01_g11890 Coffea canephora HOM05D003732 ORTHO05D004965 1.0e-22 109.8 82 64.6
Sp5g15750 Schrenkiella parvula HOM05D003732 ORTHO05D004965 1.0e-22 109.8 82 65.9
SpUn0096_0020 Schrenkiella parvula HOM05D003732 ORTHO05D004965 1.0e-22 109.8 82 65.9
DCAR_005290 Daucus carota HOM05D003732 ORTHO05D004965 1.4e-22 109.4 82 67.1
HanXRQChr06g0175491 Helianthus annuus HOM05D003732 ORTHO05D004965 1.4e-22 109.4 82 64.6
Lj3g0021313 Lotus japonicus HOM05D003732 ORTHO05D004965 1.4e-22 109.4 82 64.6
PSO170G1826 Papaver somniferum HOM05D003732 ORTHO05D004965 1.4e-22 109.4 82 61.0
Sed0004042 Sechium edule HOM05D003732 ORTHO05D004965 1.4e-22 109.4 81 66.7
TAR633G0632 Trochodendron aralioides HOM05D003732 ORTHO05D004965 1.4e-22 109.4 82 64.6
Aqoxy4G03155 Aquilegia oxysepala HOM05D003732 ORTHO05D004965 1.8e-22 109.0 82 64.6
Cpa.g.sc139.33 Carica papaya HOM05D003732 ORTHO05D004965 1.8e-22 109.0 82 65.9
HanXRQChr05g0133981 Helianthus annuus HOM05D003732 ORTHO05D004965 1.8e-22 109.0 82 62.2
Phvul.L001386 Phaseolus vulgaris HOM05D003732 ORTHO05D004965 1.8e-22 109.0 82 67.1
Thecc.09G335200 Theobroma cacao HOM05D003732 ORTHO05D004965 1.8e-22 109.0 82 65.9
Atru.chr3.3750 Acer truncatum HOM05D003732 ORTHO05D004965 2.3e-22 108.6 82 63.4
Medtr2g095840 Medicago truncatula HOM05D003732 ORTHO05D004965 2.3e-22 108.6 82 65.9
Psat5g281400 Pisum sativum HOM05D003732 ORTHO05D004965 2.3e-22 108.6 82 63.4
Ah.15g096680 Amaranthus hybridus HOM05D003732 ORTHO05D004965 3.0e-22 108.2 82 63.4
Ca_01368_v3 Cicer arietinum L. HOM05D003732 ORTHO05D004965 3.0e-22 108.2 82 64.6
Dinv06348 Davidia involucrata HOM05D003732 ORTHO05D004965 3.0e-22 108.2 82 65.9
Potri.001G233300 Populus trichocarpa HOM05D003732 ORTHO05D004965 3.0e-22 108.2 82 65.9
HPP92_018603 Vanilla planifolia HOM05D003732 ORTHO05D004965 3.0e-22 108.2 82 62.2
Zm00001eb171040 Zea mays HOM05D003732 ORTHO05D004965 3.0e-22 108.2 82 63.4
MBI19_g13322_MAGBIO Magnolia biondii HOM05D003732 ORTHO05D004965 4.0e-22 107.8 82 67.1
Manes.11G138400 Manihot esculenta HOM05D003732 ORTHO05D004965 4.0e-22 107.8 82 63.4
PSO339G6685 Papaver somniferum HOM05D003732 ORTHO05D004965 4.0e-22 107.8 82 62.2
PSO384G0746 Papaver somniferum HOM05D003732 ORTHO05D004965 4.0e-22 107.8 82 62.2
Aa31LG4G14990 Aethionema arabicum HOM05D003732 ORTHO05D004965 5.2e-22 107.5 82 64.6
TWI79G1305 Tripterygium wilfordii HOM05D003732 ORTHO05D004965 5.2e-22 107.5 82 64.6
Thhalv10002573m.g Eutrema salsugineum HOM05D003732 ORTHO05D004965 6.7e-22 107.1 82 64.6
Glyma.13G330100 Glycine max HOM05D003732 ORTHO05D004965 6.7e-22 107.1 82 64.6
BcaB05g24098 Brassica carinata HOM05D003732 ORTHO05D004965 8.8e-22 106.7 82 64.6
AUR62009702 Chenopodium quinoa HOM05D003732 ORTHO05D004965 1.1e-21 106.3 82 61.0
AT3G45770 Arabidopsis thaliana HOM05D003732 ORTHO05D004965 1.5e-21 105.9 82 63.4
Carub.0005s1163 Capsella rubella HOM05D003732 ORTHO05D004965 1.5e-21 105.9 82 63.4
AL5G24450 Arabidopsis lyrata HOM05D003732 ORTHO05D004965 2.0e-21 105.5 82 63.4
BcaC09g49713 Brassica carinata HOM05D003732 ORTHO05D004965 2.0e-21 105.5 82 64.6
CSS0019034 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 2.0e-21 105.5 82 65.9
CARHR149900 Cardamine hirsuta HOM05D003732 ORTHO05D004965 3.3e-21 104.8 82 61.0
PGR102G1443 Punica granatum HOM05D003732 ORTHO05D004965 3.3e-21 104.8 81 61.7
FAN21G0728 Fragaria x ananassa HOM05D003732 ORTHO05D004965 5.7e-21 104.0 101 54.5
unitig_736.g22424 Utricularia gibba HOM05D003732 ORTHO05D004965 5.7e-21 104.0 79 64.6
FAN11G1631 Fragaria x ananassa HOM05D003732 ORTHO05D004965 7.5e-21 103.6 101 54.5
A01p26450 Brassica napus HOM05D003732 ORTHO05D004965 9.7e-21 103.2 83 63.9
BolC1t03315H Brassica oleracea HOM05D003732 ORTHO05D004965 9.7e-21 103.2 83 63.9
BraA01t02569Z Brassica rapa HOM05D003732 ORTHO05D004965 9.7e-21 103.2 83 63.9
Hund18963 Selenicereus undatus HOM05D003732 ORTHO05D004965 9.7e-21 103.2 81 61.7
Nn2g10611 Nelumbo nucifera HOM05D003732 ORTHO05D004965 1.3e-20 102.8 82 59.8
ATR0594G008 Amborella trichopoda HOM05D003732 ORTHO05D004965 1.7e-20 102.4 81 60.5
ATR0594G235 Amborella trichopoda HOM05D003732 ORTHO05D004965 2.2e-20 102.1 81 60.5
FAN16G2257 Fragaria x ananassa HOM05D003732 ORTHO05D004965 2.2e-20 102.1 101 53.5
C01p33680 Brassica napus HOM05D003732 ORTHO05D004965 2.8e-20 101.7 83 63.9
Nitab4.5_0003743g0010 Nicotiana tabacum HOM05D003732 ORTHO05D004965 2.8e-20 101.7 61 82.0
arahy.Tifrunner.gnm1.ann1.58CB50 Arachis hypogaea HOM05D003732 ORTHO05D004965 6.3e-20 100.5 81 63.0
Sabra16G0139500 Salix brachista HOM05D003732 ORTHO05D004965 1.1e-19 99.8 95 56.8
CANSAT54G2866 Cannabis sativa HOM05D003732 ORTHO05D004965 2.0e-18 95.5 114 47.4
SHI43202 Sapria himalayana HOM05D003732 ORTHO05D004965 2.7e-18 95.1 75 61.3
arahy.Tifrunner.gnm1.ann1.B493EM Arachis hypogaea HOM05D003732 ORTHO05D004965 1.0e-17 93.2 71 64.8
BcaB05g22412 Brassica carinata HOM05D003732 ORTHO05D004965 1.1e-16 89.7 83 59.0
Peaxi162Scf00616g00319 Petunia axillaris HOM05D003732 ORTHO05D004965 1.1e-16 89.7 62 69.4
Peaxi162Scf00616g00313 Petunia axillaris HOM05D003732 ORTHO05D004965 1.5e-16 89.4 62 71.0
FAN25G0838 Fragaria x ananassa HOM05D003732 ORTHO05D004965 3.2e-16 88.2 81 56.8
SMO367G0374 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 1.6e-15 85.9 80 50.0
Pp3c9_8960 Physcomitrium patens HOM05D003732 ORTHO05D004965 4.7e-15 84.3 81 50.6
CBR_g29478 Chara braunii HOM05D003732 ORTHO05D004965 2.3e-14 82.0 83 50.6
Lj2C1044T10 Lonicera japonica HOM05D003732 ORTHO05D004965 1.2e-13 79.7 165 35.2
AagrBONN_evm.TU.Sc2ySwM_344.1470 Anthoceros agrestis HOM05D003732 ORTHO05D004965 5.7e-13 77.4 70 51.4
Cre01.g035350 Chlamydomonas reinhardtii HOM05D003732 ORTHO05D004965 7.5e-13 77.0 70 55.7
PGSC0003DMG401029257 Solanum tuberosum HOM05D003732 ORTHO05D004965 1.8e-11 72.4 43 86.0
Eucgr.B02443 Eucalyptus grandis HOM05D003732 ORTHO05D004965 2.0e-10 68.9 45 71.1
Haze_26759 Corylus avellana HOM05D003732 ORTHO05D004965 1.3e-09 66.2 69 46.4
ATR0594G185 Amborella trichopoda HOM05D003732 ORTHO05D004965 2.9e-09 65.1 44 72.7
AagrBONN_evm.TU.Sc2ySwM_228.5018 Anthoceros agrestis HOM05D003732 ORTHO05D014000 1.1e-08 63.2 75 45.3
Cfa024534 Carpinus fangiana HOM05D003732 ORTHO05D004965 1.2e-07 59.7 70 38.6
Cfa026351 Carpinus fangiana HOM05D003732 ORTHO05D004965 1.2e-07 59.7 94 39.4
Eucgr.B02444 Eucalyptus grandis HOM05D003732 ORTHO05D004965 1.6e-07 59.3 45 57.8


User provided reference genes

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