Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 2.8e-260 901.4 440 100.0
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 1.5e-248 862.4 440 95.9
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 5.2e-246 854.0 440 95.2
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 3.5e-194 681.8 433 78.3
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 3.2e-187 658.7 413 78.9
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 8.7e-185 650.6 441 73.2
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 5.3e-174 614.8 437 68.0
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 4.9e-172 608.2 446 66.8
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 3.7e-167 592.0 456 64.9
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 4.8e-167 591.7 427 67.0
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 4.5e-165 585.1 435 64.8
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 4.2e-163 578.6 439 64.7
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.0e-161 573.9 426 64.8
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 1.8e-161 573.2 435 65.5
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 2.3e-161 572.8 432 63.7
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 3.9e-161 572.0 434 65.9
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 1.6e-159 566.6 440 63.6
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 2.2e-159 566.2 451 62.1
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 2.8e-159 565.8 434 63.8
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 6.9e-158 561.2 440 62.7
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 1.5e-157 560.1 419 66.1
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 2.0e-157 559.7 439 62.4
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.3e-156 557.0 429 64.3
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 1.7e-156 556.6 422 63.3
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 2.2e-156 556.2 438 61.4
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 2.2e-156 556.2 437 62.2
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 6.5e-156 554.7 446 61.2
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 1.9e-155 553.1 433 62.4
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 1.9e-155 553.1 438 61.2
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 1.9e-155 553.1 422 62.6
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 2.5e-155 552.7 437 61.6
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 2.5e-155 552.7 433 61.0
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 3.2e-155 552.4 436 61.9
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 3.2e-155 552.4 437 61.8
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 7.2e-155 551.2 347 74.1
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 9.4e-155 550.8 439 61.7
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 1.4e-153 547.0 438 61.2
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 1.4e-153 547.0 427 61.6
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 1.8e-153 546.6 438 60.3
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 1.8e-153 546.6 341 72.4
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 3.9e-153 545.4 429 63.2
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 5.1e-153 545.0 356 71.1
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 5.1e-153 545.0 434 59.9
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 1.5e-152 543.5 434 61.3
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 2.5e-152 542.7 433 63.7
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 4.3e-152 542.0 439 59.7
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 4.3e-152 542.0 434 60.8
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 9.7e-152 540.8 434 61.5
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 9.7e-152 540.8 435 59.5
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 1.3e-151 540.4 426 60.6
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 1.3e-151 540.4 435 61.6
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 2.8e-151 539.3 428 61.2
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 6.3e-151 538.1 429 61.8
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 8.2e-151 537.7 434 61.3
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 8.2e-151 537.7 431 60.8
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 1.1e-150 537.3 432 60.0
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 1.4e-150 537.0 437 60.4
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 1.4e-150 537.0 418 61.2
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 1.4e-150 537.0 357 75.6
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.4e-150 537.0 436 61.0
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.8e-150 536.6 429 61.3
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 1.8e-150 536.6 361 67.9
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 2.4e-150 536.2 426 62.2
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 2.6e-149 532.7 430 61.2
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 2.6e-149 532.7 351 69.5
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 5.9e-149 531.6 430 60.9
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 1.3e-148 530.4 425 62.4
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 1.3e-148 530.4 354 69.2
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 1.3e-148 530.4 455 59.8
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 8.5e-148 527.7 422 60.2
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 8.5e-148 527.7 423 62.2
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 8.5e-148 527.7 433 60.0
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 1.1e-147 527.3 425 62.4
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 1.9e-147 526.6 385 67.5
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 2.5e-147 526.2 422 61.8
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 3.2e-147 525.8 358 69.6
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 3.2e-147 525.8 358 69.6
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 3.2e-147 525.8 358 69.6
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 5.5e-147 525.0 422 61.6
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 5.5e-147 525.0 422 59.5
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 7.2e-147 524.6 429 61.8
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 4.7e-146 521.9 417 60.2
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 6.1e-146 521.5 430 59.1
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 7.9e-146 521.2 419 60.9
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 7.9e-146 521.2 419 60.9
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 7.9e-146 521.2 419 60.9
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 1.4e-145 520.4 419 60.1
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 2.3e-145 519.6 420 61.0
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 3.0e-145 519.2 353 68.3
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 3.9e-145 518.8 351 67.8
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 5.1e-145 518.5 422 61.4
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.1e-144 517.3 430 58.6
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 1.5e-144 516.9 419 60.4
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 2.6e-144 516.2 419 60.4
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 4.4e-144 515.4 423 59.6
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 4.4e-144 515.4 418 59.1
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 4.4e-144 515.4 443 57.8
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 4.8e-143 511.9 423 59.1
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 8.2e-143 511.1 425 58.1
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 8.2e-143 511.1 417 57.8
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 3.1e-142 509.2 430 58.4
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 2.0e-141 506.5 362 66.3
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 2.2e-140 503.1 438 56.6
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 2.2e-140 503.1 362 64.4
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 2.2e-140 503.1 417 58.3
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 2.9e-140 502.7 432 57.2
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 5.0e-140 501.9 424 57.3
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 6.5e-140 501.5 423 58.2
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 1.1e-139 500.7 418 58.4
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 1.1e-139 500.7 368 62.8
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 7.2e-139 498.0 352 65.6
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 7.2e-139 498.0 414 59.7
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 9.4e-139 497.7 435 56.8
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 1.2e-138 497.3 332 69.3
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 8.8e-137 491.1 383 61.9
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 2.8e-135 486.1 425 56.9
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 7.7e-133 478.0 435 55.9
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 3.6e-130 469.2 412 56.8
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 3.0e-129 466.1 416 57.0
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 5.2e-129 465.3 427 56.0
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 9.7e-128 461.1 420 53.8
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 1.3e-127 460.7 417 56.8
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 1.7e-127 460.3 425 55.8
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 1.7e-127 460.3 348 62.9
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 3.7e-127 459.1 431 54.5
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 6.3e-127 458.4 348 61.8
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 6.3e-127 458.4 434 53.0
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 1.1e-126 457.6 407 57.5
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 1.1e-126 457.6 416 54.1
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 9.1e-126 454.5 420 54.8
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.0e-125 453.4 422 55.0
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 3.5e-125 452.6 422 55.2
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 4.5e-125 452.2 448 52.9
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.0e-124 451.1 430 54.2
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 1.1e-123 447.6 424 54.2
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 6.3e-119 431.8 287 68.3
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.0e-117 426.8 404 53.0
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.0e-116 424.5 344 58.4
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 5.5e-115 418.7 438 50.5
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.3e-113 413.3 369 57.2
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 2.0e-109 400.2 251 72.5
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 5.9e-109 398.7 433 47.3
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 4.7e-106 389.0 343 53.6
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 8.0e-106 388.3 342 54.7
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 3.1e-105 386.3 341 53.4
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 2.0e-104 383.6 342 53.2
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 4.1e-102 375.9 250 67.2
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 1.9e-99 367.1 305 58.0
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 4.3e-99 365.9 351 49.3
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 2.8e-98 363.2 240 68.8
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 2.8e-98 363.2 341 51.3
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 8.0e-98 361.7 240 67.1
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 6.4e-95 352.1 355 48.7
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 7.8e-93 345.1 340 47.9
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 1.9e-91 340.5 340 48.8
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 9.5e-91 338.2 307 58.6
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 1.2e-90 337.8 236 63.6
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 4.4e-88 329.3 348 47.7
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 1.7e-87 327.4 385 46.5
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 1.5e-83 314.3 298 50.7
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 2.5e-83 313.5 236 58.5
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 5.4e-78 295.8 341 44.9
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.2e-77 294.7 348 42.2
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 2.7e-77 293.5 240 55.4
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.0e-76 290.0 343 42.0
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 8.7e-76 288.5 346 42.8
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.1e-75 288.1 344 41.6
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.1e-73 281.6 346 40.8
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.5e-69 266.5 347 39.2
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 4.9e-63 246.1 404 36.4
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 1.9e-38 164.5 152 55.3
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 2.5e-38 164.1 154 53.2
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 4.6e-37 159.8 421 29.2
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.2e-22 110.5 114 43.9
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 3.2e-22 110.5 85 52.9
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.3e-20 104.4 119 40.3
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 1.1e-19 102.1 81 50.6
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 7.0e-17 92.8 123 43.9
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.0e-15 89.0 100 40.0
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 5.2e-12 76.6 87 48.3
Nn1g01454 Nelumbo nucifera HOM05D003764 ORTHO05D004356 7.7e-08 62.8 36 80.6
Prupe.6G163800 Prunus persica HOM05D003764 ORTHO05D335910 4.2e-06 57.0 47 63.8


User provided reference genes

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