Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400029172 Solanum tuberosum HOM05D007239 ORTHO05D003473 4.3e-49 197.6 95 100.0
Solyc09g047900.2 Solanum lycopersicum HOM05D007239 ORTHO05D003473 1.7e-37 159.1 81 90.1
Sopen09g016010 Solanum pennellii HOM05D007239 ORTHO05D003473 3.8e-37 157.9 81 90.1
Nitab4.5_0000038g0210 Nicotiana tabacum HOM05D007239 ORTHO05D003473 3.5e-22 108.2 93 62.4
Nitab4.5_0005686g0050 Nicotiana tabacum HOM05D007239 ORTHO05D003473 1.5e-20 102.8 93 60.2
Nn7g37666 Nelumbo nucifera HOM05D007239 ORTHO05D003473 1.4e-18 96.3 74 63.5
SalBow3G0430 Salvia bowleyana HOM05D007239 ORTHO05D003473 5.2e-18 94.4 51 84.3
Lj2A1112T41 Lonicera japonica HOM05D007239 ORTHO05D003473 1.2e-17 93.2 72 63.9
Migut.D00777 Erythranthe guttata HOM05D007239 ORTHO05D003473 2.6e-17 92.0 82 58.5
vmacro02840 Vaccinium macrocarpon HOM05D007239 ORTHO05D003473 2.6e-17 92.0 50 80.0
Actinidia23347 Actinidia chinensis HOM05D007239 ORTHO05D003473 5.7e-17 90.9 59 71.2
Oeu003675.2 Olea europaea HOM05D007239 ORTHO05D003473 9.8e-17 90.1 70 61.4
MSTRG.21297 Avicennia marina HOM05D007239 ORTHO05D003473 1.7e-16 89.4 48 81.2
Lalb_Chr12g0210211 Lupinus albus HOM05D007239 ORTHO05D003473 1.7e-16 89.4 80 61.2
Medtr8g010120 Medicago truncatula HOM05D007239 ORTHO05D003473 1.7e-16 89.4 78 55.1
Rhsim13G0054900 Rhododendron simsii HOM05D007239 ORTHO05D003473 2.2e-16 89.0 50 76.0
TAR633G1976 Trochodendron aralioides HOM05D007239 ORTHO05D003473 2.8e-16 88.6 89 55.1
Psat4g208200 Pisum sativum HOM05D007239 ORTHO05D003473 4.8e-16 87.8 81 56.8
Phvul.010G036500 Phaseolus vulgaris HOM05D007239 ORTHO05D003473 8.3e-16 87.0 81 55.6
ATR0561G157 Amborella trichopoda HOM05D007239 ORTHO05D003473 1.1e-15 86.7 77 51.9
Cfa010571 Carpinus fangiana HOM05D007239 ORTHO05D003473 1.1e-15 86.7 77 58.4
Cc01_g15900 Coffea canephora HOM05D007239 ORTHO05D003473 1.1e-15 86.7 49 79.6
PGR044G2330 Punica granatum HOM05D007239 ORTHO05D003473 1.1e-15 86.7 76 59.2
TPR.G17357 Trifolium pratense HOM05D007239 ORTHO05D003473 1.1e-15 86.7 78 56.4
Duzib133G0756 Durio zibethinus HOM05D007239 ORTHO05D003473 1.4e-15 86.3 64 65.6
CSS0041365 Camellia sinensis var. sinensis HOM05D007239 ORTHO05D003473 1.8e-15 85.9 48 79.2
Manes.12G055700 Manihot esculenta HOM05D007239 ORTHO05D003473 1.8e-15 85.9 68 61.8
SGA_v2.0_scaffold8G04492 Striga asiatica HOM05D007239 ORTHO05D003473 1.8e-15 85.9 47 80.9
GSVIVG01001533001 Vitis vinifera HOM05D007239 ORTHO05D003473 1.8e-15 85.9 83 56.6
AL9U11680 Arabidopsis lyrata HOM05D007239 ORTHO05D003473 2.4e-15 85.5 74 54.1
CARHR218160 Cardamine hirsuta HOM05D007239 ORTHO05D003473 2.4e-15 85.5 80 53.8
COL.COLO4_07352 Corchorus olitorius HOM05D007239 ORTHO05D003473 2.4e-15 85.5 64 65.6
CANSAT01G0580 Cannabis sativa HOM05D007239 ORTHO05D003473 3.1e-15 85.1 54 68.5
Lj3g0012405 Lotus japonicus HOM05D007239 ORTHO05D003473 3.1e-15 85.1 79 53.2
Cpa.g.sc8.44 Carica papaya HOM05D007239 ORTHO05D003473 4.1e-15 84.7 51 74.5
CiPaw.14G044100 Carya illinoinensis HOM05D007239 ORTHO05D003473 4.1e-15 84.7 72 55.6
Aa31LG9G5560 Aethionema arabicum HOM05D007239 ORTHO05D003473 7.0e-15 84.0 74 54.1
Aqoxy2G04059 Aquilegia oxysepala HOM05D007239 ORTHO05D003473 7.0e-15 84.0 54 66.7
unitig_0.g2160 Utricularia gibba HOM05D007239 ORTHO05D003473 7.0e-15 84.0 51 72.5
Gohir.D11G150200 Gossypium hirsutum HOM05D007239 ORTHO05D003473 9.1e-15 83.6 79 55.7
Lsat_1_v5_gn_8_98461 Lactuca sativa HOM05D007239 ORTHO05D003473 9.1e-15 83.6 99 51.5
arahy.Tifrunner.gnm1.ann1.73PK5S Arachis hypogaea HOM05D007239 ORTHO05D003473 1.2e-14 83.2 82 56.1
Gorai.007G161100 Gossypium raimondii HOM05D007239 ORTHO05D003473 1.2e-14 83.2 81 49.4
Prupe.8G187300 Prunus persica HOM05D007239 ORTHO05D003473 1.2e-14 83.2 66 56.1
AT4G12830 Arabidopsis thaliana HOM05D007239 ORTHO05D003473 1.6e-14 82.8 74 51.4
arahy.Tifrunner.gnm1.ann1.9LL7K9 Arachis hypogaea HOM05D007239 ORTHO05D003473 1.6e-14 82.8 82 56.1
QL09p047610 Quercus lobata HOM05D007239 ORTHO05D003473 1.6e-14 82.8 77 54.5
ECA236G0260 Erigeron canadensis HOM05D007239 ORTHO05D003473 2.0e-14 82.4 62 59.7
Glyma.03G097300 Glycine max HOM05D007239 ORTHO05D003473 2.0e-14 82.4 78 55.1
Glyma.U022200 Glycine max HOM05D007239 ORTHO05D003473 2.0e-14 82.4 78 55.1
HanXRQChr12g0363981 Helianthus annuus HOM05D007239 ORTHO05D003473 2.7e-14 82.0 55 65.5
Carub.0007s2998 Capsella rubella HOM05D007239 ORTHO05D003473 3.5e-14 81.6 50 70.0
THA.LOC104808813 Tarenaya hassleriana HOM05D007239 ORTHO05D003473 3.5e-14 81.6 52 71.2
Ca_23157_v3 Cicer arietinum L. HOM05D007239 ORTHO05D003473 4.5e-14 81.3 52 67.3
Thhalv10025411m.g Eutrema salsugineum HOM05D007239 ORTHO05D003473 4.5e-14 81.3 74 51.4
MD10G1148300 Malus domestica HOM05D007239 ORTHO05D003473 4.5e-14 81.3 78 55.1
Sp7g09530 Schrenkiella parvula HOM05D007239 ORTHO05D003473 4.5e-14 81.3 87 49.4
Sc24g0003370 Simmondsia chinensis HOM05D007239 ORTHO05D003473 5.9e-14 80.9 61 60.7
Hma1.2p1_0161F.1_g071630 Hydrangea macrophylla HOM05D007239 ORTHO05D003473 1.0e-13 80.1 78 55.1
HPP92_006975 Vanilla planifolia HOM05D007239 ORTHO05D003473 1.0e-13 80.1 75 53.3
Haze_03504 Corylus avellana HOM05D007239 ORTHO05D003473 1.3e-13 79.7 55 63.6
Gohir.A11G143800 Gossypium hirsutum HOM05D007239 ORTHO05D003473 1.7e-13 79.3 81 48.1
BcaB03g16187 Brassica carinata HOM05D007239 ORTHO05D003473 2.9e-13 78.6 86 47.7
A04p09120 Brassica napus HOM05D007239 ORTHO05D003473 2.9e-13 78.6 87 47.1
BraA04t16606Z Brassica rapa HOM05D007239 ORTHO05D003473 2.9e-13 78.6 87 47.1
PSO675G4050 Papaver somniferum HOM05D007239 ORTHO05D003473 2.9e-13 78.6 80 48.8
Thecc.01G207900 Theobroma cacao HOM05D007239 ORTHO05D003473 2.9e-13 78.6 64 59.4
BcaC02g09462 Brassica carinata HOM05D007239 ORTHO05D003473 3.8e-13 78.2 50 68.0
C04p43040 Brassica napus HOM05D007239 ORTHO05D003473 3.8e-13 78.2 50 68.0
BolC4t25882H Brassica oleracea HOM05D007239 ORTHO05D003473 3.8e-13 78.2 50 68.0
Hund09481 Selenicereus undatus HOM05D007239 ORTHO05D003473 3.8e-13 78.2 53 69.8
Potri.014G175700 Populus trichocarpa HOM05D007239 ORTHO05D003473 5.0e-13 77.8 49 69.4
Eucgr.K02363 Eucalyptus grandis HOM05D007239 ORTHO05D003473 6.5e-13 77.4 60 61.7
Sabra14G0134500 Salix brachista HOM05D007239 ORTHO05D003473 6.5e-13 77.4 45 73.3
EL10Ac5g10589 Beta vulgaris HOM05D007239 ORTHO05D003473 1.5e-12 76.3 74 54.1
SEGI_09765 Sequoiadendron giganteum HOM05D007239 ORTHO05D003473 1.5e-12 76.3 56 57.1
TWI36G1452 Tripterygium wilfordii HOM05D007239 ORTHO05D003473 1.5e-12 76.3 79 48.1
PSO017G2875 Papaver somniferum HOM05D007239 ORTHO05D003473 2.5e-12 75.5 83 48.2
RcHm_v2.0_Chr6g0282231 Rosa chinensis HOM05D007239 ORTHO05D003473 3.2e-12 75.1 58 56.9
VMungo0331G2011 Vigna mungo HOM05D007239 ORTHO05D003473 5.5e-12 74.3 80 48.8
Atru.chr6.3526 Acer truncatum HOM05D007239 ORTHO05D003473 7.2e-12 73.9 52 63.5
MD05G1153800 Malus domestica HOM05D007239 ORTHO05D003473 7.2e-12 73.9 60 56.7
FvH4_2g17500 Fragaria vesca HOM05D007239 ORTHO05D003473 9.5e-12 73.6 58 58.6
FAN27G0828 Fragaria x ananassa HOM05D007239 ORTHO05D003473 9.5e-12 73.6 58 58.6
CDE02G0798 Ceratophyllum demersum HOM05D007239 ORTHO05D003473 1.2e-11 73.2 47 68.1
AUR62008070 Chenopodium quinoa HOM05D007239 ORTHO05D003473 2.8e-11 72.0 75 57.3
Pp3c2_38210 Physcomitrium patens HOM05D007239 ORTHO05D003473 3.6e-11 71.6 44 70.5
Mapoly0005s0133 Marchantia polymorpha HOM05D007239 ORTHO05D003473 8.0e-11 70.5 43 72.1
Ciclev10015502m.g Citrus clementina HOM05D007239 ORTHO05D003473 1.0e-10 70.1 47 68.1
DCAR_012703 Daucus carota HOM05D007239 ORTHO05D003473 1.0e-10 70.1 82 51.2
AagrBONN_evm.TU.Sc2ySwM_228.3326 Anthoceros agrestis HOM05D007239 ORTHO05D003473 2.3e-10 68.9 64 50.0
Os01g0919700 Oryza sativa ssp. japonica HOM05D007239 ORTHO05D003473 5.2e-10 67.8 59 55.9
FAN15G3405 Fragaria x ananassa HOM05D007239 ORTHO05D003473 7.5e-09 63.9 72 47.2
FAN27G0498 Fragaria x ananassa HOM05D007239 ORTHO05D003473 7.5e-09 63.9 72 47.2
Zm00001eb143320 Zea mays HOM05D007239 ORTHO05D003473 9.8e-09 63.5 41 68.3


User provided reference genes

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