Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400029168 Solanum tuberosum HOM05D007176 ORTHO05D009050 1.8e-116 423.3 347 100.0
Sopen06g001340 Solanum pennellii HOM05D007176 ORTHO05D009050 9.1e-113 411.0 347 89.0
Solyc06g005380.3 Solanum lycopersicum HOM05D007176 ORTHO05D009050 4.5e-112 408.7 347 97.1
CAN.G111.5 Capsicum annuum HOM05D007176 ORTHO05D009050 1.2e-107 394.0 346 95.1
Peaxi162Scf00258g00925 Petunia axillaris HOM05D007176 ORTHO05D009050 1.7e-98 363.6 342 90.4
Migut.K00028 Erythranthe guttata HOM05D007176 ORTHO05D009050 2.1e-85 320.1 347 73.2
QL07p025011 Quercus lobata HOM05D007176 ORTHO05D009050 1.1e-84 317.8 344 74.1
Dinv16365 Davidia involucrata HOM05D007176 ORTHO05D009050 9.8e-83 311.2 344 63.1
Nitab4.5_0008255g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 9.8e-83 311.2 343 62.7
Duzib106G0399 Durio zibethinus HOM05D007176 ORTHO05D009050 3.7e-82 309.3 343 62.7
Thecc.05G178200 Theobroma cacao HOM05D007176 ORTHO05D009050 3.7e-82 309.3 343 60.9
FvH4_6g21620 Fragaria vesca HOM05D007176 ORTHO05D009050 8.3e-82 308.1 347 70.6
FAN14G2546 Fragaria x ananassa HOM05D007176 ORTHO05D009050 1.1e-81 307.8 347 70.9
TAR633G1141 Trochodendron aralioides HOM05D007176 ORTHO05D009050 1.9e-81 307.0 344 73.0
Manes.09G039600 Manihot esculenta HOM05D007176 ORTHO05D009050 2.4e-81 306.6 341 70.7
CiPaw.09G027300 Carya illinoinensis HOM05D007176 ORTHO05D009050 4.1e-81 305.8 345 73.3
RcHm_v2.0_Chr3g0478871 Rosa chinensis HOM05D007176 ORTHO05D009050 4.1e-81 305.8 344 62.8
FAN02G0922 Fragaria x ananassa HOM05D007176 ORTHO05D009050 7.1e-81 305.1 347 70.3
TAR633G0683 Trochodendron aralioides HOM05D007176 ORTHO05D009050 7.1e-81 305.1 344 72.7
Cfa020128 Carpinus fangiana HOM05D007176 ORTHO05D009050 1.6e-80 303.9 345 51.0
FAN09G2372 Fragaria x ananassa HOM05D007176 ORTHO05D009050 2.1e-80 303.5 347 69.7
Rhsim04G0094400 Rhododendron simsii HOM05D007176 ORTHO05D009050 4.6e-80 302.4 342 79.5
Nn2g15783 Nelumbo nucifera HOM05D007176 ORTHO05D009050 2.3e-79 300.1 341 67.4
CSS0044198 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 3.9e-79 299.3 344 80.2
Gohir.A04G053500 Gossypium hirsutum HOM05D007176 ORTHO05D009050 1.5e-78 297.4 343 63.3
Hma1.2p1_0645F.1_g194890 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 1.5e-78 297.4 344 72.1
Eucgr.K01865 Eucalyptus grandis HOM05D007176 ORTHO05D009050 3.3e-78 296.2 344 70.9
Lju124C23T17 Lonicera japonica HOM05D007176 ORTHO05D009050 3.3e-78 296.2 332 74.1
Cc06_g15630 Coffea canephora HOM05D007176 ORTHO05D009050 1.2e-77 294.3 346 79.8
FAN05G5781 Fragaria x ananassa HOM05D007176 ORTHO05D009050 1.1e-76 291.2 353 68.6
EL10Ac3g06857 Beta vulgaris HOM05D007176 ORTHO05D009050 3.1e-76 289.7 341 68.3
BcaC07g40246 Brassica carinata HOM05D007176 ORTHO05D009050 2.6e-75 286.6 344 61.0
HanXRQChr10g0300591 Helianthus annuus HOM05D007176 ORTHO05D009050 7.6e-75 285.0 347 68.9
Prupe.7G084400 Prunus persica HOM05D007176 ORTHO05D009050 1.7e-74 283.9 346 69.9
COL.COLO4_29390 Corchorus olitorius HOM05D007176 ORTHO05D009050 2.9e-74 283.1 320 72.2
Haze_20048 Corylus avellana HOM05D007176 ORTHO05D009050 8.3e-74 281.6 377 54.1
Haze_20055 Corylus avellana HOM05D007176 ORTHO05D009050 8.3e-74 281.6 377 54.1
Aa31LG10G13110 Aethionema arabicum HOM05D007176 ORTHO05D009050 7.1e-73 278.5 344 59.6
ECA247G1245 Erigeron canadensis HOM05D007176 ORTHO05D009050 7.1e-73 278.5 344 68.6
A09p51090 Brassica napus HOM05D007176 ORTHO05D009050 4.6e-72 275.8 368 57.1
Actinidia17284 Actinidia chinensis HOM05D007176 ORTHO05D009050 1.0e-71 274.6 344 69.8
Potri.006G195800 Populus trichocarpa HOM05D007176 ORTHO05D009050 2.5e-70 270.0 343 68.8
CSS0035640 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 9.6e-70 268.1 344 75.6
SalBow1G6257 Salvia bowleyana HOM05D007176 ORTHO05D009050 1.2e-69 267.7 353 67.4
Cpa.g.sc85.35 Carica papaya HOM05D007176 ORTHO05D009050 1.6e-69 267.3 347 68.6
THA.LOC104802720 Tarenaya hassleriana HOM05D007176 ORTHO05D009050 3.6e-69 266.2 345 55.9
Sabra06G0150500 Salix brachista HOM05D007176 ORTHO05D009050 1.1e-68 264.6 343 68.2
C08p33910 Brassica napus HOM05D007176 ORTHO05D009050 1.4e-68 264.2 344 58.4
arahy.Tifrunner.gnm1.ann1.5B5G66 Arachis hypogaea HOM05D007176 ORTHO05D009050 6.8e-68 261.9 351 64.1
GSVIVG01033441001 Vitis vinifera HOM05D007176 ORTHO05D009050 1.5e-67 260.8 319 65.5
CANSAT64G0938 Cannabis sativa HOM05D007176 ORTHO05D009050 2.6e-67 260.0 343 65.9
Lj5g0009846 Lotus japonicus HOM05D007176 ORTHO05D009050 2.6e-67 260.0 344 65.1
vmacro22113 Vaccinium macrocarpon HOM05D007176 ORTHO05D009050 2.6e-67 260.0 370 48.6
MD12G1053200 Malus domestica HOM05D007176 ORTHO05D009050 9.9e-67 258.1 344 66.9
Sc13g0002490 Simmondsia chinensis HOM05D007176 ORTHO05D009050 9.9e-67 258.1 345 57.1
MD14G1051600 Malus domestica HOM05D007176 ORTHO05D009050 2.2e-66 256.9 344 58.1
Os02g0281150 Oryza sativa ssp. japonica HOM05D007176 ORTHO05D009050 2.2e-66 256.9 346 65.3
Nitab4.5_0000009g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 1.4e-65 254.2 413 49.6
Lalb_Chr02g0153821 Lupinus albus HOM05D007176 ORTHO05D009050 1.2e-64 251.1 348 74.7
arahy.Tifrunner.gnm1.ann1.I5CDLA Arachis hypogaea HOM05D007176 ORTHO05D009050 4.6e-64 249.2 364 61.3
AL5G40300 Arabidopsis lyrata HOM05D007176 ORTHO05D009050 2.5e-62 243.4 344 62.2
CARHR168930 Cardamine hirsuta HOM05D007176 ORTHO05D009050 7.3e-62 241.9 344 54.9
TPR.G19346 Trifolium pratense HOM05D007176 ORTHO05D009050 7.3e-62 241.9 378 61.4
Thhalv10006065m.g Eutrema salsugineum HOM05D007176 ORTHO05D009050 1.3e-61 241.1 344 62.5
PGR142G3952 Punica granatum HOM05D007176 ORTHO05D009050 2.8e-61 240.0 344 62.8
Lsat_1_v5_gn_9_26900 Lactuca sativa HOM05D007176 ORTHO05D009050 3.6e-61 239.6 346 58.1
MBI01_g44281_MAGBIO Magnolia biondii HOM05D007176 ORTHO05D009050 3.6e-61 239.6 331 44.1
Atru.BG.213.p Acer truncatum HOM05D007176 ORTHO05D009050 1.2e-59 234.6 342 65.2
Aqoxy279s002 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 2.0e-59 233.8 343 72.0
Aqoxy2G00051 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 2.0e-59 233.8 343 72.0
Carub.0005s2528 Capsella rubella HOM05D007176 ORTHO05D009050 2.0e-59 233.8 344 61.6
Zm00001eb237210 Zea mays HOM05D007176 ORTHO05D009050 3.4e-59 233.0 346 70.8
Sp5g04340 Schrenkiella parvula HOM05D007176 ORTHO05D009050 5.8e-59 232.3 344 51.7
AT3G58530 Arabidopsis thaliana HOM05D007176 ORTHO05D009050 1.1e-57 228.0 344 60.2
CDE04G3485 Ceratophyllum demersum HOM05D007176 ORTHO05D009050 2.4e-57 226.9 341 61.6
SGA_v2.0_scaffold274G46490 Striga asiatica HOM05D007176 ORTHO05D009050 5.1e-55 219.2 136 79.4
Medtr1g054625 Medicago truncatula HOM05D007176 ORTHO05D009050 2.5e-54 216.9 344 62.2
AUR62032747 Chenopodium quinoa HOM05D007176 ORTHO05D009050 5.3e-52 209.1 319 61.8
Glyma.09G105500 Glycine max HOM05D007176 ORTHO05D009050 1.2e-51 208.0 348 60.6
Hma1.2p1_0645F.1_g194900 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 9.9e-51 204.9 286 71.0
Ca_03573_v3 Cicer arietinum L. HOM05D007176 ORTHO05D009050 1.7e-50 204.1 350 60.0
DCAR_019856 Daucus carota HOM05D007176 ORTHO05D009050 2.9e-50 203.4 326 39.3
BolC8t50987H Brassica oleracea HOM05D000032 ORTHO05D001620 4.9e-50 202.6 277 60.3
Gohir.D04G094700 Gossypium hirsutum HOM05D007176 ORTHO05D009050 1.1e-49 201.4 277 61.0
PSO541G4948 Papaver somniferum HOM05D007176 ORTHO05D009050 7.1e-49 198.7 288 67.0
Ah.13g075580 Amaranthus hybridus HOM05D007176 ORTHO05D009050 2.7e-48 196.8 283 66.4
unitig_736.g22301 Utricularia gibba HOM05D007176 ORTHO05D009050 1.8e-47 194.1 394 62.4
Gorai.009G392400 Gossypium raimondii HOM05D007176 ORTHO05D009050 3.9e-47 193.0 310 57.7
Ciclev10012430m.g Citrus clementina HOM05D007176 ORTHO05D009050 1.5e-46 191.0 139 66.2
VMungo0720G0788 Vigna mungo HOM05D007176 ORTHO05D009050 2.2e-42 177.2 141 63.1
PSO675G7508 Papaver somniferum HOM05D007176 ORTHO05D009050 5.5e-41 172.6 141 61.7
Phvul.007G261900 Phaseolus vulgaris HOM05D007176 ORTHO05D009050 2.1e-40 170.6 141 60.3
HPP92_010126 Vanilla planifolia HOM05D007176 ORTHO05D009050 2.1e-40 170.6 136 61.0
Psat6g088000 Pisum sativum HOM05D007176 ORTHO05D009050 7.9e-40 168.7 297 72.4
AagrBONN_evm.TU.Sc2ySwM_228.1251 Anthoceros agrestis HOM05D007176 ORTHO05D009050 2.3e-39 167.2 344 60.2
BraA09t40553Z Brassica rapa HOM05D000032 ORTHO05D001620 2.3e-39 167.2 278 54.7
BcaC02g10014 Brassica carinata HOM05D007176 ORTHO05D009050 1.5e-38 164.5 296 59.5
SMO118G0524 Selaginella moellendorffii HOM05D007176 ORTHO05D009050 4.5e-35 152.9 340 47.9
Atru.chr8.1185 Acer truncatum HOM05D007176 ORTHO05D009050 1.3e-34 151.4 138 58.0
SEGI_09769 Sequoiadendron giganteum HOM05D007176 ORTHO05D009050 1.4e-33 147.9 289 59.9
BolC4t24963H Brassica oleracea HOM05D000032 ORTHO05D001620 1.2e-32 144.8 300 57.3
C04p33960 Brassica napus HOM05D007176 ORTHO05D009050 2.1e-32 144.1 300 57.7
arahy.Tifrunner.gnm1.ann1.0S64XP Arachis hypogaea HOM05D007176 ORTHO05D009050 2.3e-31 140.6 276 54.7
Pp3c23_2930 Physcomitrium patens HOM05D007176 ORTHO05D009050 3.0e-31 140.2 341 46.3
ATR0001G043 Amborella trichopoda HOM05D007176 ORTHO05D009050 8.5e-26 122.1 86 66.3
Hund24819 Selenicereus undatus HOM05D007176 ORTHO05D001610 3.2e-25 120.2 121 79.3
Hund24823 Selenicereus undatus HOM05D007176 ORTHO05D009050 1.3e-18 98.2 115 47.0
HanXRQChr05g0140621 Helianthus annuus HOM05D007176 ORTHO05D009050 1.6e-16 91.3 76 61.8
HanXRQChr10g0316231 Helianthus annuus HOM05D007176 ORTHO05D009050 1.6e-16 91.3 76 61.8
A04p02540 Brassica napus HOM05D000032 ORTHO05D001620 5.7e-14 82.8 293 32.1
PRCOL_00005880 Prasinoderma coloniale HOM05D007176 ORTHO05D009050 3.2e-09 67.0 271 22.5
Mapoly0209s0007 Marchantia polymorpha HOM05D007176 ORTHO05D009050 1.4e-07 61.6 125 31.2


User provided reference genes

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