Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 1.2e-285 985.7 474 100.0
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 5.9e-272 940.3 472 95.3
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 2.2e-271 938.3 472 94.7
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 1.7e-263 912.1 473 92.4
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 2.1e-261 905.2 472 90.9
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 2.8e-253 878.2 459 90.4
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 5.2e-228 794.3 472 78.8
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 1.9e-225 785.8 472 78.4
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 3.2e-225 785.0 472 78.0
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 5.4e-225 784.3 474 78.9
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 6.0e-224 780.8 472 77.3
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 7.8e-224 780.4 472 77.3
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 8.6e-223 776.9 471 77.5
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 1.8e-220 769.2 472 76.3
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 5.8e-219 764.2 474 76.8
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 1.4e-217 759.6 472 76.5
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 2.4e-217 758.8 473 75.9
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 4.2e-217 758.1 474 74.5
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 7.1e-217 757.3 472 75.2
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 1.2e-216 756.5 510 71.6
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 2.1e-216 755.7 474 76.2
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 3.9e-215 751.5 474 74.9
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 8.7e-215 750.4 472 75.0
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 8.7e-215 750.4 472 74.8
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 4.3e-214 748.0 468 75.0
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 7.3e-214 747.3 472 74.4
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 2.8e-213 745.3 474 74.5
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 3.6e-213 745.0 472 73.7
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 4.8e-213 744.6 473 74.6
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 6.2e-213 744.2 454 76.0
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 8.1e-213 743.8 475 74.5
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 1.1e-212 743.4 472 73.5
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 1.5e-211 739.6 460 75.9
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 2.0e-211 739.2 472 73.9
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 7.6e-211 737.3 475 73.7
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 9.9e-211 736.9 474 73.2
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 1.7e-210 736.1 472 73.7
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 2.2e-210 735.7 472 74.6
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 2.9e-210 735.3 471 72.2
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 4.9e-210 734.6 476 73.5
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 6.4e-210 734.2 473 73.8
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 6.4e-210 734.2 469 72.9
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 1.4e-209 733.0 465 73.3
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 2.4e-209 732.3 464 73.5
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 3.2e-209 731.9 473 73.4
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 9.3e-209 730.3 472 73.1
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 9.3e-209 730.3 472 73.5
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 2.7e-208 728.8 470 73.0
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.7e-208 728.8 472 73.7
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 2.7e-208 728.8 474 73.8
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 2.7e-208 728.8 471 72.6
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 3.5e-208 728.4 472 73.5
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 1.8e-207 726.1 471 72.8
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 3.0e-207 725.3 464 72.2
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 5.1e-207 724.5 472 72.2
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 6.7e-207 724.2 471 72.6
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 8.7e-207 723.8 474 70.9
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.5e-206 722.2 471 72.4
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 4.3e-206 721.5 472 72.0
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 5.6e-206 721.1 474 71.1
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 4.8e-205 718.0 464 73.3
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 1.8e-204 716.1 473 70.8
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 2.4e-204 715.7 465 71.8
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 2.4e-204 715.7 474 72.4
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 4.0e-204 714.9 471 70.3
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 4.0e-204 714.9 471 70.9
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 1.5e-203 713.0 460 72.8
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 1.7e-202 709.5 472 69.9
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 3.8e-202 708.4 472 69.3
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 1.1e-201 706.8 465 69.9
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 5.5e-201 704.5 466 70.6
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 1.8e-199 699.5 466 70.2
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 1.5e-198 696.4 464 70.9
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 1.8e-196 689.5 467 70.2
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 2.4e-196 689.1 472 69.7
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 6.9e-196 687.6 464 70.5
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.7e-194 682.9 472 69.3
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 3.2e-193 678.7 457 70.7
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 3.2e-193 678.7 464 69.6
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 7.1e-193 677.6 463 67.6
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 1.6e-192 676.4 473 67.0
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 2.1e-192 676.0 468 67.5
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 4.6e-192 674.9 464 69.6
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 4.6e-192 674.9 486 67.1
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 6.0e-192 674.5 464 69.4
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 6.0e-192 674.5 464 69.4
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 2.3e-191 672.5 475 67.2
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 5.1e-191 671.4 431 73.5
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 4.3e-190 668.3 463 68.9
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 2.1e-189 666.0 479 65.8
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 3.2e-185 652.1 511 63.4
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 6.7e-183 644.4 501 62.1
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 8.7e-183 644.0 450 69.1
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 2.5e-177 625.9 464 65.7
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 3.7e-165 585.5 465 58.9
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 4.1e-164 582.0 473 61.1
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 8.8e-159 564.3 378 72.0
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 3.7e-157 558.9 321 82.2
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 1.1e-153 547.4 370 71.1
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 5.9e-139 498.4 322 74.2
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 3.3e-129 466.1 320 65.6
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.6e-110 403.3 483 47.6
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 4.7e-104 382.5 266 66.5
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 5.8e-102 375.6 276 63.8
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 3.5e-91 339.7 214 68.2
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 4.6e-91 339.3 218 67.0
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 8.7e-74 282.0 183 71.6
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.2e-72 277.3 177 76.3
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 1.2e-62 245.0 167 70.1
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 1.9e-60 237.7 148 69.6
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 3.4e-25 120.6 104 62.5
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 1.9e-15 88.2 53 67.9
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 4.3e-12 77.0 79 51.9


User provided reference genes

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