Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400028997 Solanum tuberosum HOM05D007952 ORTHO05D009823 2.1e-79 298.9 143 100.0
arahy.Tifrunner.gnm1.ann1.TT5YJH Arachis hypogaea HOM05D007952 ORTHO05D009823 1.6e-58 229.6 124 89.5
arahy.Tifrunner.gnm1.ann1.XUIM66 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.2e-55 219.9 143 78.3
Lsat_1_v5_gn_4_99801 Lactuca sativa HOM05D007952 ORTHO05D009823 3.1e-51 205.3 100 100.0
PGSC0003DMG400035391 Solanum tuberosum HOM05D007952 ORTHO05D009823 3.1e-51 205.3 100 100.0
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 7.7e-50 200.7 101 96.0
Oeu020621.1 Olea europaea HOM05D007952 ORTHO05D009823 2.2e-49 199.1 100 96.0
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 5.0e-49 198.0 99 96.0
Nn5g29057 Nelumbo nucifera HOM05D007952 ORTHO05D009823 6.5e-49 197.6 100 98.0
Medtr0002s0270 Medicago truncatula HOM05D007952 ORTHO05D009823 1.5e-48 196.4 100 96.0
Sc01g0006530 Simmondsia chinensis HOM05D007952 ORTHO05D009823 3.2e-48 195.3 100 96.0
Nn029s41587 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.8e-46 189.5 124 79.8
Nn064s42224 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.8e-46 189.5 124 79.8
Nn206s45068 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.8e-46 189.5 124 79.8
Nn219s45283 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.8e-46 189.5 124 79.8
CSS0039937 Camellia sinensis var. sinensis HOM05D007952 ORTHO05D009823 6.8e-46 187.6 114 85.1
Atru.chr13.2454 Acer truncatum HOM05D007952 ORTHO05D009823 9.8e-45 183.7 112 83.0
ECA246G1432 Erigeron canadensis HOM05D007952 ORTHO05D009823 3.7e-44 181.8 102 90.2
Sc04g0003580 Simmondsia chinensis HOM05D007952 ORTHO05D009823 2.3e-41 172.6 94 89.4
arahy.Tifrunner.gnm1.ann1.RE2PS1 Arachis hypogaea HOM05D007952 ORTHO05D009823 5.0e-41 171.4 80 100.0
EL10Ac6g15366 Beta vulgaris HOM05D007952 ORTHO05D009823 1.4e-38 163.3 88 90.9
arahy.Tifrunner.gnm1.ann1.GIFH8E Arachis hypogaea HOM05D007952 ORTHO05D009823 8.9e-38 160.6 78 97.4
SEGI_08440 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 8.9e-38 160.6 148 62.2
SEGI_09919 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 8.9e-38 160.6 148 62.2
SEGI_21867 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 8.9e-38 160.6 148 62.2
Oeu022560.1 Olea europaea HOM05D007952 ORTHO05D009823 1.5e-37 159.8 140 60.7
MBI08_g48227_MAGBIO Magnolia biondii HOM05D007952 ORTHO05D009823 1.3e-36 156.8 81 95.1
Peaxi162Scf00987g00215 Petunia axillaris HOM05D007952 ORTHO05D009823 1.3e-36 156.8 81 95.1
unitig_87.g27919 Utricularia gibba HOM05D007952 ORTHO05D009823 1.3e-36 156.8 81 95.1
unitig_87.g28035 Utricularia gibba HOM05D007952 ORTHO05D009823 1.3e-36 156.8 81 95.1
unitig_91.g26519 Utricularia gibba HOM05D007952 ORTHO05D009823 1.3e-36 156.8 81 95.1
arahy.Tifrunner.gnm1.ann1.0845WK Arachis hypogaea HOM05D007952 ORTHO05D009823 2.2e-36 156.0 97 80.4
arahy.Tifrunner.gnm1.ann1.88RRM9 Arachis hypogaea HOM05D007952 ORTHO05D009823 2.2e-36 156.0 97 80.4
Medtr3g035635 Medicago truncatula HOM05D007952 ORTHO05D009823 6.3e-36 154.5 82 91.5
arahy.Tifrunner.gnm1.ann1.J5KLX8 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.8e-35 152.9 115 69.6
EL10As10g23962 Beta vulgaris HOM05D007952 ORTHO05D009823 3.1e-35 152.1 81 93.8
arahy.Tifrunner.gnm1.ann1.HDQ4NC Arachis hypogaea HOM05D007952 ORTHO05D009823 5.4e-35 151.4 97 78.4
Migut.D01400 Erythranthe guttata HOM05D007952 ORTHO05D009823 7.0e-35 151.0 72 100.0
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 2.0e-34 149.4 82 89.0
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 3.5e-34 148.7 75 94.7
BolSC44t60812H Brassica oleracea HOM05D007952 ORTHO05D009823 5.9e-34 147.9 69 100.0
Lj2C1239G84 Lonicera japonica HOM05D007952 ORTHO05D009823 7.8e-34 147.5 73 98.6
Atru.chr9.365 Acer truncatum HOM05D007952 ORTHO05D009823 5.0e-33 144.8 74 94.6
arahy.Tifrunner.gnm1.ann1.PHD7EH Arachis hypogaea HOM05D007952 ORTHO05D009823 1.9e-32 142.9 78 85.9
Sc23g0003910 Simmondsia chinensis HOM05D007952 ORTHO05D009823 1.4e-30 136.7 85 82.4
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 8.9e-30 134.0 73 89.0
Sc21g0004590 Simmondsia chinensis HOM05D007952 ORTHO05D009823 1.5e-29 133.3 96 69.8
SEGI_38349 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 6.4e-28 127.9 73 87.7
ECA232G1868 Erigeron canadensis HOM05D000002 ORTHO05D002065 5.4e-27 124.8 131 55.0
Nn6g32821 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.2e-26 123.6 61 96.7
Nn6g32826 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.2e-26 123.6 61 96.7
Nitab4.5_0004552g0010 Nicotiana tabacum HOM05D000796 ORTHO05D009823 1.2e-26 123.6 89 74.2
SEGI_20804 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 6.0e-26 121.3 129 55.8
Hma1.2p1_0594F.1_g185798 Hydrangea macrophylla HOM05D007952 ORTHO05D009823 6.6e-25 117.9 56 98.2
Psat0ss8367g0160 Pisum sativum HOM05D001387 ORTHO05D001250 1.9e-24 116.3 74 74.3
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 3.3e-24 115.5 106 61.3
Nn6g33130 Nelumbo nucifera HOM05D007952 ORTHO05D009823 4.3e-24 115.2 56 98.2
Sopen11g014330 Solanum pennellii HOM05D000743 ORTHO05D000580 2.8e-23 112.5 63 85.7
DCAR_004958 Daucus carota HOM05D007952 ORTHO05D009823 2.3e-22 109.4 52 98.1
Ca_02733_v3 Cicer arietinum L. HOM05D008016 ORTHO05D009823 3.1e-22 109.0 66 80.3
Sed0014465 Sechium edule HOM05D010190 ORTHO05D004271 1.2e-21 107.1 104 59.6
CAN.G262.4 Capsicum annuum HOM05D007952 ORTHO05D009823 1.5e-21 106.7 65 78.5
Nitab4.5_0007400g0010 Nicotiana tabacum HOM05D007952 ORTHO05D009823 6.4e-20 101.3 75 69.3
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 1.1e-19 100.5 98 58.2
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 1.9e-19 99.8 60 83.3
BcaC04g20704 Brassica carinata HOM05D007952 ORTHO05D009823 3.2e-19 99.0 69 75.4
SEGI_35056 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 6.0e-18 94.7 107 51.4
CAN.G1186.47 Capsicum annuum HOM05D007952 ORTHO05D009823 7.8e-18 94.4 56 80.4
Potri.005G037850 Populus trichocarpa HOM05D007952 ORTHO05D009823 5.0e-17 91.7 57 78.9
Peaxi162Scf00002g00723 Petunia axillaris HOM05D007952 ORTHO05D009823 1.5e-16 90.1 54 75.9
CBR_g12953 Chara braunii HOM05D000019 ORTHO05D000048 3.3e-16 89.0 55 76.4
arahy.Tifrunner.gnm1.ann1.B37VQ6 Arachis hypogaea HOM05D007952 ORTHO05D009823 2.3e-14 82.8 65 66.2
Oeu000007.1 Olea europaea HOM05D007952 ORTHO05D009823 3.1e-14 82.4 63 65.1
Oeu012768.1 Olea europaea HOM05D007952 ORTHO05D009823 3.1e-14 82.4 57 73.7
Nitab4.5_0001170g0050 Nicotiana tabacum HOM05D010190 ORTHO05D011667 8.9e-14 80.9 144 43.1
Nitab4.5_0007025g0020 Nicotiana tabacum HOM05D001226 ORTHO05D009823 5.8e-13 78.2 58 67.2
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 7.5e-13 77.8 72 59.7
Peaxi162Scf00608g00016 Petunia axillaris HOM05D000680 ORTHO05D005619 1.7e-12 76.6 34 100.0
SEGI_02200 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 1.7e-12 76.6 53 71.7
BolSC91t61267H Brassica oleracea HOM05D007952 ORTHO05D009823 6.4e-12 74.7 52 78.8
arahy.Tifrunner.gnm1.ann1.840LER Arachis hypogaea HOM05D000533 ORTHO05D002807 8.3e-12 74.3 36 94.4
TAR626G1139 Trochodendron aralioides HOM05D000301 ORTHO05D000303 1.1e-11 73.9 36 91.7
SabraPtG0006400 Salix brachista HOM05D012647 ORTHO05D014727 1.9e-11 73.2 34 97.1
Lsat_1_v5_gn_2_20561 Lactuca sativa HOM05D010488 ORTHO05D011667 2.4e-11 72.8 34 97.1
Nitab4.5_0003382g0050 Nicotiana tabacum HOM05D010190 ORTHO05D011667 4.6e-10 68.6 36 88.9
CAN.G2251.1 Capsicum annuum HOM05D010190 ORTHO05D011667 3.9e-09 65.5 33 87.9
ECA236G0169 Erigeron canadensis HOM05D000353 ORTHO05D000174 4.3e-08 62.0 58 60.3
arahy.Tifrunner.gnm1.ann1.60YYL0 Arachis hypogaea HOM05D010190 ORTHO05D009823 1.2e-07 60.5 100 43.0
BolC6t36075H Brassica oleracea HOM05D000963 ORTHO05D009823 2.1e-07 59.7 29 86.2
arahy.Tifrunner.gnm1.ann1.9E5EUV Arachis hypogaea HOM05D000388 ORTHO05D000473 3.6e-07 58.9 62 56.5
CAN.G8.21 Capsicum annuum HOM05D000580 ORTHO05D001362 4.7e-07 58.5 95 37.9
Nn031s41604 Nelumbo nucifera HOM05D007952 ORTHO05D009823 6.2e-07 58.2 27 100.0
Nn233s45560 Nelumbo nucifera HOM05D007952 ORTHO05D009823 6.2e-07 58.2 27 100.0
Nn241s45689 Nelumbo nucifera HOM05D007952 ORTHO05D009823 6.2e-07 58.2 27 100.0
Nn6g33131 Nelumbo nucifera HOM05D007952 ORTHO05D009823 6.2e-07 58.2 27 100.0
Nn6g33484 Nelumbo nucifera HOM05D007952 ORTHO05D009823 6.2e-07 58.2 27 100.0
Oeu011728.3 Olea europaea HOM05D002681 ORTHO05D003372 6.2e-07 58.2 27 100.0
Actinidia30703 Actinidia chinensis HOM05D001966 ORTHO05D009823 1.4e-06 57.0 65 52.3
TPR.G384 Trifolium pratense HOM05D010190 ORTHO05D010933 2.4e-06 56.2 29 82.8
Atru.chr9.2550 Acer truncatum HOM05D010190 ORTHO05D009823 4.0e-06 55.5 27 92.6
arahy.Tifrunner.gnm1.ann1.4P2RM7 Arachis hypogaea HOM05D005034 ORTHO05D006234 5.2e-06 55.1 27 96.3
Phvul.009G038333 Phaseolus vulgaris HOM05D007952 ORTHO05D009823 5.2e-06 55.1 27 96.3
Nn1g08228 Nelumbo nucifera HOM05D007952 ORTHO05D009823 8.9e-06 54.3 27 92.6
SEGI_20161 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 8.9e-06 54.3 31 77.4


User provided reference genes

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