Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 5.2e-67 257.7 141 100.0
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 3.9e-62 241.5 141 95.7
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 3.1e-59 231.9 141 93.6
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 1.1e-53 213.4 141 84.4
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 5.8e-42 174.5 126 76.2
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 1.1e-40 170.2 122 73.8
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 1.1e-40 170.2 114 79.8
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 1.9e-40 169.5 125 73.6
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 2.5e-40 169.1 125 73.6
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 3.2e-40 168.7 124 75.8
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 4.2e-40 168.3 125 74.4
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 1.6e-39 166.4 137 71.5
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 2.1e-39 166.0 124 73.4
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 3.5e-39 165.2 122 73.0
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 3.5e-39 165.2 121 72.7
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 4.6e-39 164.9 125 72.8
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 4.6e-39 164.9 117 76.1
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 6.0e-39 164.5 124 73.4
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 6.0e-39 164.5 125 72.8
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 1.0e-38 163.7 122 72.1
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 1.8e-38 162.9 119 73.1
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 2.3e-38 162.5 114 76.3
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 3.9e-38 161.8 131 66.4
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 5.1e-38 161.4 123 74.0
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 6.7e-38 161.0 123 73.2
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 6.7e-38 161.0 138 67.4
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 6.7e-38 161.0 114 75.4
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 6.7e-38 161.0 114 75.4
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 8.7e-38 160.6 124 72.6
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 8.7e-38 160.6 121 72.7
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 8.7e-38 160.6 125 70.4
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 8.7e-38 160.6 111 77.5
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 1.1e-37 160.2 122 73.0
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 1.5e-37 159.8 118 73.7
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 1.5e-37 159.8 120 73.3
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 1.9e-37 159.5 118 72.0
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.9e-37 159.5 121 71.9
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 1.9e-37 159.5 122 73.8
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 1.9e-37 159.5 114 75.4
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 2.5e-37 159.1 110 76.4
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 2.5e-37 159.1 111 75.7
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 3.3e-37 158.7 122 72.1
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 3.3e-37 158.7 131 65.6
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 3.3e-37 158.7 113 74.3
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 3.3e-37 158.7 120 70.8
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 5.7e-37 157.9 111 76.6
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 7.4e-37 157.5 124 71.0
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 7.4e-37 157.5 113 75.2
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 9.6e-37 157.1 125 70.4
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 1.3e-36 156.8 120 71.7
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 1.6e-36 156.4 113 74.3
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 1.6e-36 156.4 113 74.3
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 2.1e-36 156.0 123 67.5
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 2.1e-36 156.0 124 70.2
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 3.7e-36 155.2 119 70.6
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 3.7e-36 155.2 113 76.1
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 3.7e-36 155.2 113 76.1
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 3.7e-36 155.2 128 69.5
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 3.7e-36 155.2 115 73.0
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 4.8e-36 154.8 124 66.9
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 6.3e-36 154.5 120 70.0
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 6.3e-36 154.5 120 70.0
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 6.3e-36 154.5 120 70.0
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 6.3e-36 154.5 113 72.6
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.1e-35 153.7 110 75.5
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 1.4e-35 153.3 141 62.4
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 1.4e-35 153.3 141 62.4
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 1.4e-35 153.3 113 71.7
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.8e-35 152.9 108 77.8
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 1.8e-35 152.9 110 73.6
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 1.8e-35 152.9 134 64.2
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 3.1e-35 152.1 102 79.4
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 4.1e-35 151.8 109 73.4
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 5.3e-35 151.4 119 68.1
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 5.3e-35 151.4 113 71.7
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 6.9e-35 151.0 124 68.5
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 6.9e-35 151.0 124 68.5
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 9.0e-35 150.6 108 76.9
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 1.2e-34 150.2 124 67.7
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 1.5e-34 149.8 114 71.1
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 3.4e-34 148.7 116 72.4
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 4.5e-34 148.3 113 69.0
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 4.5e-34 148.3 125 68.0
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 3.8e-33 145.2 126 62.7
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 1.4e-32 143.3 123 63.4
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 3.2e-32 142.1 114 67.5
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 6.1e-31 137.9 113 65.5
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 3.0e-30 135.6 115 63.5
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 3.9e-30 135.2 130 61.5
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 9.7e-29 130.6 142 58.5
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 4.8e-28 128.3 102 64.7
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 8.2e-28 127.5 113 58.4
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 1.8e-27 126.3 114 63.2
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 3.1e-27 125.6 114 66.7
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 7.7e-26 120.9 111 61.3
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 2.9e-25 119.0 110 64.5
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 3.8e-25 118.6 138 55.1
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 2.1e-23 112.8 82 70.7
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 3.0e-22 109.0 115 57.4
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 8.8e-22 107.5 111 58.6
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 4.5e-18 95.1 74 70.3
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 2.9e-17 92.4 106 55.7
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 2.7e-15 85.9 133 38.3
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 3.0e-14 82.4 114 41.2
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 1.1e-13 80.5 103 45.6
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 7.4e-13 77.8 74 56.8
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 1.1e-11 73.9 51 76.5
BcaB01g03316 Brassica carinata HOM05D007302 ORTHO05D009191 6.1e-07 58.2 51 60.8
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 5.2e-06 55.1 55 54.5
SMO290G0010 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 6.7e-06 54.7 115 34.8


User provided reference genes

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