Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 3.5e-80 301.6 155 100.0
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 3.6e-77 291.6 155 96.8
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 4.0e-68 261.5 156 88.5
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 8.9e-68 260.4 157 87.9
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.4e-67 258.5 157 87.3
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.1e-65 253.4 157 87.9
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 1.5e-62 243.0 145 85.5
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.5e-62 242.3 158 84.2
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.1e-61 239.2 155 81.9
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 4.7e-61 238.0 157 78.3
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 1.2e-59 233.4 157 77.1
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 9.9e-59 230.3 159 76.1
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 2.2e-58 229.2 157 77.1
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 2.9e-58 228.8 151 76.8
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 4.9e-58 228.0 157 77.7
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 8.3e-58 227.3 157 75.8
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 1.4e-57 226.5 157 76.4
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 2.4e-57 225.7 157 76.4
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 2.4e-57 225.7 157 76.4
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 2.4e-57 225.7 160 74.4
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 2.4e-57 225.7 154 74.0
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 4.1e-57 224.9 158 75.9
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 5.4e-57 224.6 155 77.4
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.2e-56 223.4 157 75.2
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.2e-56 223.4 157 75.2
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 1.2e-56 223.4 157 73.2
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 1.6e-56 223.0 157 74.5
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 2.7e-56 222.2 157 73.9
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 3.5e-56 221.9 157 73.9
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 4.6e-56 221.5 151 73.5
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 6.0e-56 221.1 157 73.9
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 1.0e-55 220.3 157 74.5
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 1.0e-55 220.3 157 73.9
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 1.3e-55 219.9 155 76.1
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.7e-55 219.5 142 78.9
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 3.0e-55 218.8 142 78.9
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 3.0e-55 218.8 157 73.9
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 3.9e-55 218.4 125 88.0
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 5.1e-55 218.0 157 72.6
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 6.6e-55 217.6 157 73.9
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 6.6e-55 217.6 158 74.1
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 1.1e-54 216.9 150 76.7
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 1.1e-54 216.9 151 74.2
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 1.5e-54 216.5 157 70.7
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 1.9e-54 216.1 155 75.5
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 2.5e-54 215.7 150 74.7
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 2.5e-54 215.7 157 72.0
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 2.5e-54 215.7 157 72.0
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 2.5e-54 215.7 162 74.7
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 3.3e-54 215.3 155 74.8
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 5.6e-54 214.5 157 72.0
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 5.6e-54 214.5 155 74.8
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 7.3e-54 214.2 124 86.3
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 7.3e-54 214.2 142 80.3
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 7.3e-54 214.2 157 72.6
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 7.3e-54 214.2 155 72.3
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 9.5e-54 213.8 137 82.5
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 9.5e-54 213.8 159 74.2
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 1.2e-53 213.4 149 76.5
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 2.1e-53 212.6 155 72.9
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 2.1e-53 212.6 156 74.4
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 3.6e-53 211.8 125 86.4
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 4.7e-53 211.5 158 72.2
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 6.2e-53 211.1 157 72.0
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 8.1e-53 210.7 157 71.3
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 1.4e-52 209.9 158 70.3
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 1.4e-52 209.9 156 73.1
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 2.4e-52 209.1 162 68.5
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 2.4e-52 209.1 124 85.5
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 5.2e-52 208.0 160 72.5
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 6.8e-52 207.6 160 72.5
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 6.8e-52 207.6 157 73.2
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 8.9e-52 207.2 125 84.0
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 1.5e-51 206.5 155 74.2
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 1.5e-51 206.5 128 81.2
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 3.4e-51 205.3 153 73.2
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 3.4e-51 205.3 128 82.8
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 5.8e-51 204.5 156 69.2
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 5.8e-51 204.5 157 70.7
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 1.7e-50 203.0 159 70.4
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 1.7e-50 203.0 159 70.4
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 2.9e-50 202.2 156 73.1
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 2.9e-50 202.2 159 73.0
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 4.9e-50 201.4 157 70.7
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 1.4e-49 199.9 158 71.5
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 3.2e-49 198.7 161 70.2
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 5.4e-49 198.0 126 77.8
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 1.2e-48 196.8 130 80.8
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 4.6e-48 194.9 115 88.7
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 4.8e-45 184.9 133 70.7
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 1.9e-41 172.9 124 68.5
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 3.2e-41 172.2 127 70.9
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 1.2e-40 170.2 142 64.8
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 1.6e-40 169.9 157 62.4
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 1.7e-39 166.4 129 69.0
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 3.0e-39 165.6 96 86.5
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 2.5e-38 162.5 131 66.4
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 4.3e-38 161.8 128 66.4
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 9.6e-38 160.6 133 64.7
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.6e-37 159.8 114 71.9
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 6.2e-37 157.9 104 73.1
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 1.2e-35 153.7 121 69.4
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 2.0e-35 152.9 130 63.8
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 3.8e-34 148.7 129 62.8
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 3.2e-33 145.6 147 54.4
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 4.2e-33 145.2 97 77.3
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 5.4e-33 144.8 114 65.8
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 3.5e-32 142.1 142 57.7
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 6.1e-16 88.2 148 44.6
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 4.3e-14 82.0 114 43.0
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 1.5e-11 73.6 110 41.8
SMO353G0424 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 5.1e-07 58.5 107 38.3


User provided reference genes

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