Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400027985 Solanum tuberosum HOM05D000032 ORTHO05D009914 6.2e-55 217.2 112 100.0
Sopen09g010040 Solanum pennellii HOM05D000032 ORTHO05D009914 1.4e-54 216.1 112 99.1
Solyc09g015930.3 Solanum lycopersicum HOM05D000032 ORTHO05D009914 1.8e-54 215.7 112 99.1
Nitab4.5_0004884g0020 Nicotiana tabacum HOM05D000032 ORTHO05D009914 1.9e-51 205.7 112 94.6
Peaxi162Scf00395g00118 Petunia axillaris HOM05D000032 ORTHO05D009914 4.5e-45 184.5 144 70.8
CSS0018475 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D009914 6.1e-42 174.1 113 80.5
Dinv12284 Davidia involucrata HOM05D000032 ORTHO05D009914 7.9e-42 173.7 113 79.6
Nn2g10281 Nelumbo nucifera HOM05D000032 ORTHO05D009914 7.9e-42 173.7 113 77.9
Oeu011386.1 Olea europaea HOM05D000032 ORTHO05D009914 1.8e-41 172.6 113 77.0
ECA248G3852 Erigeron canadensis HOM05D000032 ORTHO05D009914 1.1e-40 169.9 112 77.7
HanXRQChr01g0012981 Helianthus annuus HOM05D000032 ORTHO05D009914 1.5e-40 169.5 112 77.7
Cc00_g18890 Coffea canephora HOM05D000032 ORTHO05D009914 1.9e-40 169.1 113 76.1
Hma1.2p1_0170F.1_g075240 Hydrangea macrophylla HOM05D000032 ORTHO05D009914 2.5e-40 168.7 113 77.9
DCAR_004794 Daucus carota HOM05D000032 ORTHO05D009914 3.3e-40 168.3 113 73.5
Lj1A113T56 Lonicera japonica HOM05D000032 ORTHO05D009914 3.3e-40 168.3 113 76.1
GSVIVG01024552001 Vitis vinifera HOM05D000032 ORTHO05D009914 9.7e-40 166.8 113 75.2
Cpa.g.sc2.289 Carica papaya HOM05D000032 ORTHO05D009914 1.3e-39 166.4 113 75.2
Lsat_1_v5_gn_5_175060 Lactuca sativa HOM05D000032 ORTHO05D009914 1.3e-39 166.4 115 74.8
TAR633G2770 Trochodendron aralioides HOM05D000032 ORTHO05D009914 1.3e-39 166.4 113 74.3
Cc01_g00400 Coffea canephora HOM05D000032 ORTHO05D009914 2.2e-39 165.6 113 75.2
vmacro14643 Vaccinium macrocarpon HOM05D000032 ORTHO05D009914 3.1e-38 161.8 113 73.5
Aqoxy1G01255 Aquilegia oxysepala HOM05D000032 ORTHO05D009914 4.1e-38 161.4 113 72.6
CiPaw.14G049900 Carya illinoinensis HOM05D000032 ORTHO05D009914 4.1e-38 161.4 113 73.5
PSO170G3634 Papaver somniferum HOM05D000032 ORTHO05D009914 4.1e-38 161.4 114 74.6
PSO017G6307 Papaver somniferum HOM05D000032 ORTHO05D009914 6.9e-38 160.6 114 73.7
HanXRQChr11g0338281 Helianthus annuus HOM05D000032 ORTHO05D009914 1.5e-37 159.5 113 73.5
Rhsim01G0243700 Rhododendron simsii HOM05D000032 ORTHO05D009914 2.6e-37 158.7 113 73.5
ATR1127G115 Amborella trichopoda HOM05D000032 ORTHO05D009914 3.4e-37 158.3 113 70.8
Potri.013G158000 Populus trichocarpa HOM05D000032 ORTHO05D009914 1.0e-36 156.8 113 72.6
QL01p024432 Quercus lobata HOM05D000032 ORTHO05D009914 1.3e-36 156.4 112 72.3
Migut.D00815 Erythranthe guttata HOM05D000032 ORTHO05D009914 1.7e-36 156.0 112 69.6
FAN16G3520 Fragaria x ananassa HOM05D000032 ORTHO05D009914 1.7e-36 156.0 113 69.9
Ciclev10000727m.g Citrus clementina HOM05D000032 ORTHO05D009914 2.9e-36 155.2 112 71.4
Phvul.006G079800 Phaseolus vulgaris HOM05D000032 ORTHO05D009914 2.9e-36 155.2 113 71.7
VMungo0540G1754 Vigna mungo HOM05D000032 ORTHO05D009914 2.9e-36 155.2 113 71.7
FAN25G2921 Fragaria x ananassa HOM05D000032 ORTHO05D009914 3.8e-36 154.8 113 69.0
FAN11G0883 Fragaria x ananassa HOM05D000032 ORTHO05D009914 6.5e-36 154.1 113 69.0
MD03G1050800 Malus domestica HOM05D000032 ORTHO05D009914 6.5e-36 154.1 113 73.5
Glyma.11G199100 Glycine max HOM05D000032 ORTHO05D009914 8.5e-36 153.7 113 71.7
RcHm_v2.0_Chr5g0073371 Rosa chinensis HOM05D000032 ORTHO05D009914 8.5e-36 153.7 113 69.9
Haze_24476 Corylus avellana HOM05D000032 ORTHO05D009914 1.1e-35 153.3 113 72.6
Atru.chr10.2334 Acer truncatum HOM05D000032 ORTHO05D009914 1.4e-35 152.9 113 71.7
FvH4_3g40620 Fragaria vesca HOM05D000032 ORTHO05D009914 1.4e-35 152.9 113 69.0
FAN21G0412 Fragaria x ananassa HOM05D000032 ORTHO05D009914 1.9e-35 152.5 113 68.1
Cfa011839 Carpinus fangiana HOM05D000032 ORTHO05D009914 3.2e-35 151.8 113 72.6
CDE06G1504 Ceratophyllum demersum HOM05D000032 ORTHO05D009914 4.2e-35 151.4 116 65.5
Glyma.18G051700 Glycine max HOM05D000032 ORTHO05D009914 4.2e-35 151.4 113 69.9
arahy.Tifrunner.gnm1.ann1.589SZX Arachis hypogaea HOM05D000032 ORTHO05D009914 7.2e-35 150.6 113 70.8
Sabra13G0126800 Salix brachista HOM05D000032 ORTHO05D009914 1.6e-34 149.4 114 71.1
Ca_15065_v3 Cicer arietinum L. HOM05D000032 ORTHO05D009914 6.1e-34 147.5 112 69.6
Lalb_Chr20g0117331 Lupinus albus HOM05D000032 ORTHO05D009914 7.9e-34 147.1 113 69.0
Medtr3g467550 Medicago truncatula HOM05D000032 ORTHO05D009914 3.9e-33 144.8 112 69.6
TPR.G13904 Trifolium pratense HOM05D000032 ORTHO05D009914 5.1e-33 144.4 112 67.9
Psat5g147360 Pisum sativum HOM05D000032 ORTHO05D009914 6.7e-33 144.1 112 68.8
Lj6g0027261 Lotus japonicus HOM05D000032 ORTHO05D009914 8.8e-33 143.7 113 66.4
MD11G1052800 Malus domestica HOM05D000032 ORTHO05D009914 3.3e-32 141.7 113 66.4
Mapoly0003s0204 Marchantia polymorpha HOM05D000032 ORTHO05D009914 9.7e-32 140.2 115 64.3
Manes.18G127000 Manihot esculenta HOM05D000032 ORTHO05D009914 2.8e-31 138.7 113 67.3
SMO367G0037 Selaginella moellendorffii HOM05D000032 ORTHO05D009914 8.2e-31 137.1 116 64.7
Pp3c2_25070 Physcomitrium patens HOM05D000032 ORTHO05D009914 1.4e-30 136.3 115 64.3
Pp3c2_25130 Physcomitrium patens HOM05D000032 ORTHO05D009914 1.4e-30 136.3 115 64.3
Pp3c1_12370 Physcomitrium patens HOM05D000032 ORTHO05D009914 2.4e-30 135.6 115 63.5
Pp3c1_12380 Physcomitrium patens HOM05D000032 ORTHO05D009914 2.4e-30 135.6 115 63.5
Actinidia23835 Actinidia chinensis HOM05D000032 ORTHO05D009914 3.1e-30 135.2 110 66.4
arahy.Tifrunner.gnm1.ann1.VAHG0I Arachis hypogaea HOM05D000032 ORTHO05D009914 1.2e-29 133.3 102 69.6
CBR_g38188 Chara braunii HOM05D000032 ORTHO05D009914 6.1e-26 120.9 113 59.3
MCO14G340 Micromonas commoda HOM05D000032 ORTHO05D009914 1.2e-21 106.7 93 59.1
Cre03.g158750 Chlamydomonas reinhardtii HOM05D000032 ORTHO05D009914 2.6e-21 105.5 116 51.7
SEGI_32378 Sequoiadendron giganteum HOM05D000032 ORTHO05D009914 3.5e-21 105.1 112 53.6
SGA_v2.0_scaffold54G19461 Striga asiatica HOM05D000032 ORTHO05D009914 1.7e-15 86.3 77 61.0
PRCOL_00003285 Prasinoderma coloniale HOM05D000032 ORTHO05D009914 7.0e-06 54.3 121 39.7


User provided reference genes

Program Settings