Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 4.6e-106 387.9 194 100.0
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 4.8e-87 324.7 195 87.2
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 1.8e-86 322.8 195 86.7
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 3.5e-53 212.2 197 60.4
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 3.9e-44 182.2 184 60.9
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 8.1e-34 147.9 204 49.0
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 1.7e-31 140.2 209 43.5
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 3.7e-31 139.0 214 45.8
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 8.3e-31 137.9 198 48.5
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 1.9e-30 136.7 217 46.1
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 2.1e-29 133.3 211 46.4
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 2.1e-29 133.3 218 45.4
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 1.7e-28 130.2 202 48.5
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 1.7e-28 130.2 192 45.8
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 1.7e-28 130.2 192 45.8
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 3.9e-28 129.0 221 43.0
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 5.1e-28 128.6 211 44.1
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 1.1e-27 127.5 217 42.4
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 1.9e-27 126.7 203 42.4
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 1.9e-27 126.7 203 42.4
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 2.5e-27 126.3 215 44.7
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 7.3e-27 124.8 188 45.2
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 1.2e-26 124.0 210 42.9
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 1.6e-26 123.6 214 43.0
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 2.8e-26 122.9 215 43.7
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 3.6e-26 122.5 219 39.7
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 4.7e-26 122.1 221 42.1
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 4.7e-26 122.1 223 42.6
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 4.7e-26 122.1 228 41.2
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 8.1e-26 121.3 219 40.2
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 1.1e-25 120.9 198 42.9
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 1.4e-25 120.6 229 38.9
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.8e-25 120.2 222 42.3
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 4.0e-25 119.0 218 41.3
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 6.8e-25 118.2 212 41.0
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.5e-24 117.1 229 38.9
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 1.5e-24 117.1 188 44.7
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 2.0e-24 116.7 223 41.3
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 2.0e-24 116.7 204 43.1
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 2.0e-24 116.7 204 43.6
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 2.6e-24 116.3 226 39.8
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 2.6e-24 116.3 218 41.7
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 5.8e-24 115.2 227 41.0
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 1.3e-23 114.0 190 40.5
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 1.3e-23 114.0 229 39.3
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 2.2e-23 113.2 166 47.0
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 3.8e-23 112.5 203 41.9
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 4.9e-23 112.1 178 45.5
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 8.4e-23 111.3 229 38.4
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.4e-22 110.5 204 42.6
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.9e-22 110.2 194 39.7
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 1.9e-22 110.2 207 41.1
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 2.4e-22 109.8 195 43.1
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 3.2e-22 109.4 167 44.9
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 3.2e-22 109.4 236 39.0
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 3.2e-22 109.4 228 37.7
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 3.2e-22 109.4 219 40.2
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 5.4e-22 108.6 200 41.0
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 7.1e-22 108.2 235 38.7
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 7.1e-22 108.2 203 41.9
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 7.1e-22 108.2 229 37.6
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 2.1e-21 106.7 231 38.1
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 4.6e-21 105.5 226 38.5
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 4.6e-21 105.5 181 41.4
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 6.0e-21 105.1 175 43.4
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 7.8e-21 104.8 119 56.3
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 3.0e-20 102.8 214 37.4
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 3.9e-20 102.4 181 43.6
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 3.9e-20 102.4 214 39.3
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 3.9e-20 102.4 247 35.6
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 5.1e-20 102.1 198 37.9
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 8.6e-20 101.3 182 42.9
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 8.6e-20 101.3 148 45.3
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 1.9e-19 100.1 190 39.5
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 3.3e-19 99.4 211 37.9
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 4.3e-19 99.0 197 37.6
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 1.2e-18 97.4 206 36.4
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 1.6e-18 97.1 211 34.6
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.6e-18 97.1 191 38.2
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 1.4e-17 94.0 185 43.2
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 2.4e-17 93.2 240 33.3
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 2.4e-17 93.2 187 34.8
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 3.1e-17 92.8 168 42.3
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 3.1e-17 92.8 175 42.3
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 6.9e-17 91.7 188 37.8
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 6.9e-17 91.7 188 37.8
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 8.9e-17 91.3 274 31.0
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 1.2e-16 90.9 232 38.4
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 1.5e-16 90.5 186 39.2
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.5e-16 90.5 189 34.4
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 9.9e-16 87.8 189 38.6
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 8.4e-15 84.7 270 31.9
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 1.9e-14 83.6 186 37.6
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 2.4e-14 83.2 195 36.4
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 2.4e-14 83.2 195 36.4
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 3.2e-14 82.8 226 33.2
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 5.4e-14 82.0 138 41.3
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 1.7e-12 77.0 114 49.1
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 1.5e-11 73.9 166 32.5
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 7.3e-11 71.6 175 34.3
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 9.6e-11 71.2 251 31.1
Lsat_1_v5_gn_1_25160 Lactuca sativa HOM05D007182 ORTHO05D008919 9.6e-11 71.2 206 32.5
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 2.1e-10 70.1 169 35.5
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 4.0e-09 65.9 153 36.6
DCAR_031230 Daucus carota HOM05D007182 ORTHO05D008919 5.3e-09 65.5 170 32.9
Lj7P307T15 Lonicera japonica HOM05D007182 ORTHO05D008919 1.3e-07 60.8 66 48.5
HanXRQChr02g0037031 Helianthus annuus HOM05D007182 ORTHO05D008919 2.2e-07 60.1 196 30.6
ECA247G3744 Erigeron canadensis HOM05D007182 ORTHO05D008919 2.9e-07 59.7 180 32.8
MBI06_g01043_MAGBIO Magnolia biondii HOM05D007182 ORTHO05D008919 4.9e-07 58.9 129 36.4
MBI03_g11135_MAGBIO Magnolia biondii HOM05D007182 ORTHO05D008919 7.1e-06 55.1 121 36.4


User provided reference genes

Program Settings