Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400027743 Solanum tuberosum HOM05D007042 ORTHO05D008441 1.0e-105 386.7 189 100.0
Solyc04g011530.3 Solanum lycopersicum HOM05D007042 ORTHO05D008441 1.5e-101 372.9 190 97.4
Sopen04g005710 Solanum pennellii HOM05D007042 ORTHO05D008441 3.3e-101 371.7 190 97.4
CAN.G786.8 Capsicum annuum HOM05D007042 ORTHO05D008441 1.2e-93 346.7 190 91.1
Nitab4.5_0010166g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 1.1e-91 340.1 190 90.5
Nitab4.5_0013552g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 2.0e-90 335.9 190 89.5
Dinv16402 Davidia involucrata HOM05D007042 ORTHO05D008441 7.0e-75 284.3 185 77.3
CSS0015019 Camellia sinensis var. sinensis HOM05D007042 ORTHO05D008441 2.0e-74 282.7 183 77.0
Dinv43069 Davidia involucrata HOM05D007042 ORTHO05D008441 4.5e-74 281.6 192 74.5
Peaxi162Scf00760g00324 Petunia axillaris HOM05D007042 ORTHO05D008441 5.9e-74 281.2 156 89.7
Hma1.2p1_2139F.1_g314960 Hydrangea macrophylla HOM05D007042 ORTHO05D008441 1.9e-72 276.2 185 75.7
Actinidia09516 Actinidia chinensis HOM05D007042 ORTHO05D008441 3.3e-72 275.4 178 75.3
vmacro14796 Vaccinium macrocarpon HOM05D007042 ORTHO05D008441 1.2e-71 273.5 194 71.1
HanXRQChr15g0468211 Helianthus annuus HOM05D007042 ORTHO05D008441 1.0e-70 270.4 187 70.1
Lsat_1_v5_gn_9_11480 Lactuca sativa HOM05D007042 ORTHO05D008441 6.8e-70 267.7 194 71.6
Cc02_g07760 Coffea canephora HOM05D007042 ORTHO05D008441 1.2e-69 266.9 204 69.6
Lj1A74G98 Lonicera japonica HOM05D007042 ORTHO05D008441 2.6e-69 265.8 186 72.6
ECA247G0849 Erigeron canadensis HOM05D007042 ORTHO05D008441 1.7e-68 263.1 191 69.1
GSVIVG01028431001 Vitis vinifera HOM05D007042 ORTHO05D008441 1.7e-68 263.1 183 71.6
Oeu048243.1 Olea europaea HOM05D007042 ORTHO05D008441 3.7e-68 261.9 193 68.9
TAR633G0993 Trochodendron aralioides HOM05D007042 ORTHO05D008441 4.1e-67 258.5 185 69.7
Nn1g02976 Nelumbo nucifera HOM05D007042 ORTHO05D008441 1.2e-66 256.9 185 68.6
SalBow3G0444 Salvia bowleyana HOM05D007042 ORTHO05D008441 4.6e-66 255.0 194 67.0
Eucgr.H04779 Eucalyptus grandis HOM05D007042 ORTHO05D008441 6.6e-65 251.1 180 70.6
Potri.002G256700 Populus trichocarpa HOM05D007042 ORTHO05D008441 8.6e-65 250.8 194 64.9
Thecc.01G250400 Theobroma cacao HOM05D007042 ORTHO05D008441 1.5e-64 250.0 185 67.0
Cpa.g.sc87.28 Carica papaya HOM05D007042 ORTHO05D008441 1.9e-64 249.6 181 66.3
Rhsim01G0260600 Rhododendron simsii HOM05D007042 ORTHO05D008441 4.3e-64 248.4 156 74.4
Migut.F00782 Erythranthe guttata HOM05D007042 ORTHO05D008441 2.1e-63 246.1 183 68.3
Haze_24706 Corylus avellana HOM05D007042 ORTHO05D008441 6.2e-63 244.6 184 65.8
Duzib133G0775 Durio zibethinus HOM05D007042 ORTHO05D008441 1.8e-62 243.0 198 62.1
arahy.Tifrunner.gnm1.ann1.UI445S Arachis hypogaea HOM05D007042 ORTHO05D008441 8.9e-62 240.7 194 64.9
CiPaw.03G270900 Carya illinoinensis HOM05D007042 ORTHO05D008441 1.2e-61 240.4 184 65.8
Gorai.001G181700 Gossypium raimondii HOM05D007042 ORTHO05D008441 1.5e-61 240.0 193 62.7
SGA_v2.0_scaffold94G28473 Striga asiatica HOM05D007042 ORTHO05D008441 2.0e-61 239.6 190 63.7
arahy.Tifrunner.gnm1.ann1.T4WIMW Arachis hypogaea HOM05D007042 ORTHO05D008441 3.4e-61 238.8 194 63.9
Gohir.A07G152300 Gossypium hirsutum HOM05D007042 ORTHO05D008441 3.4e-61 238.8 193 62.2
TWI18G1052 Tripterygium wilfordii HOM05D007042 ORTHO05D008441 3.4e-61 238.8 193 61.1
Sed0010391 Sechium edule HOM05D007042 ORTHO05D008441 4.4e-61 238.4 183 63.4
Manes.12G044501 Manihot esculenta HOM05D007042 ORTHO05D008441 7.5e-61 237.7 181 66.3
Gohir.D07G158500 Gossypium hirsutum HOM05D007042 ORTHO05D008441 9.8e-61 237.3 193 62.2
Lj1g0019034 Lotus japonicus HOM05D007042 ORTHO05D008441 1.3e-60 236.9 189 64.6
Ciclev10022455m.g Citrus clementina HOM05D007042 ORTHO05D008441 2.2e-60 236.1 183 64.5
CsaV3_6G007350 Cucumis sativus L. HOM05D007042 ORTHO05D008441 4.9e-60 235.0 185 63.2
Actinidia27524 Actinidia chinensis HOM05D007042 ORTHO05D008441 6.4e-60 234.6 192 64.1
Cfa002484 Carpinus fangiana HOM05D007042 ORTHO05D008441 5.4e-59 231.5 158 69.6
Actinidia23697 Actinidia chinensis HOM05D007042 ORTHO05D008441 7.0e-59 231.1 193 63.2
CiPaw.04G190700 Carya illinoinensis HOM05D007042 ORTHO05D008441 7.0e-59 231.1 194 62.9
Psat3g054000 Pisum sativum HOM05D007042 ORTHO05D008441 7.0e-59 231.1 181 65.2
MD10G1176500 Malus domestica HOM05D007042 ORTHO05D008441 9.2e-59 230.7 186 61.8
MELO3C022392.2 Cucumis melo HOM05D007042 ORTHO05D008441 2.7e-58 229.2 185 61.6
Ca_08743_v3 Cicer arietinum L. HOM05D007042 ORTHO05D008441 4.6e-58 228.4 172 67.4
Atru.chr5.1857 Acer truncatum HOM05D007042 ORTHO05D008441 6.0e-58 228.0 194 61.9
Glyma.19G168400 Glycine max HOM05D007042 ORTHO05D008441 6.0e-58 228.0 193 61.1
MD05G1188900 Malus domestica HOM05D007042 ORTHO05D008441 7.8e-58 227.6 185 61.1
Aqoxy5G00144 Aquilegia oxysepala HOM05D007042 ORTHO05D008441 1.0e-57 227.3 190 61.6
THA.LOC104814528 Tarenaya hassleriana HOM05D007042 ORTHO05D008441 1.3e-57 226.9 185 63.2
Medtr7g098470 Medicago truncatula HOM05D007042 ORTHO05D008441 2.3e-57 226.1 181 63.5
Prupe.8G215500 Prunus persica HOM05D007042 ORTHO05D008441 8.6e-57 224.2 194 62.4
ClCG06G001410 Citrullus lanatus HOM05D007042 ORTHO05D008441 3.3e-56 222.2 175 61.7
VMungo1383G0900 Vigna mungo HOM05D007042 ORTHO05D008441 7.3e-56 221.1 189 61.4
AUR62025440 Chenopodium quinoa HOM05D007042 ORTHO05D008441 9.5e-56 220.7 163 62.6
CDE06G0115 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 1.6e-55 219.9 181 60.8
Phvul.001G164800 Phaseolus vulgaris HOM05D007042 ORTHO05D008441 2.1e-55 219.5 189 61.4
QL09p041460 Quercus lobata HOM05D007042 ORTHO05D008441 2.1e-55 219.5 299 45.8
Glyma.03G167300 Glycine max HOM05D007042 ORTHO05D008441 3.6e-55 218.8 193 60.6
AUR62008799 Chenopodium quinoa HOM05D007042 ORTHO05D008441 8.1e-55 217.6 161 60.9
BcaC06g36726 Brassica carinata HOM05D007042 ORTHO05D008441 1.1e-54 217.2 184 61.4
C07p00700 Brassica napus HOM05D007042 ORTHO05D008441 1.1e-54 217.2 184 61.4
BolC7t40512H Brassica oleracea HOM05D007042 ORTHO05D008441 1.1e-54 217.2 184 61.4
Sp3g33630 Schrenkiella parvula HOM05D007042 ORTHO05D008441 1.1e-54 217.2 181 61.9
EL10Ac7g17687 Beta vulgaris HOM05D007042 ORTHO05D008441 4.0e-54 215.3 160 61.9
Hund05486 Selenicereus undatus HOM05D000914 ORTHO05D000718 4.0e-54 215.3 168 63.1
A07p00340 Brassica napus HOM05D007042 ORTHO05D008441 1.2e-53 213.8 186 60.2
PGR031G2106 Punica granatum HOM05D007042 ORTHO05D008441 1.5e-53 213.4 169 63.9
ATR0787G115 Amborella trichopoda HOM05D007042 ORTHO05D008441 9.9e-53 210.7 178 60.7
BraA07t27825Z Brassica rapa HOM05D007042 ORTHO05D008441 1.7e-52 209.9 177 60.5
RcHm_v2.0_Chr6g0286631 Rosa chinensis HOM05D007042 ORTHO05D008441 2.9e-52 209.1 201 56.7
CARHR110910 Cardamine hirsuta HOM05D007042 ORTHO05D008441 6.4e-52 208.0 182 57.7
BcaB03g16831 Brassica carinata HOM05D007042 ORTHO05D008441 8.3e-52 207.6 187 58.3
Carub.0003s3477 Capsella rubella HOM05D007042 ORTHO05D008441 8.3e-52 207.6 182 59.9
Thhalv10002102m.g Eutrema salsugineum HOM05D007042 ORTHO05D008441 1.1e-51 207.2 182 57.7
AL3G53360 Arabidopsis lyrata HOM05D007042 ORTHO05D008441 2.4e-51 206.1 168 61.3
AT2G20390 Arabidopsis thaliana HOM05D007042 ORTHO05D008441 2.4e-51 206.1 182 59.3
Sc17g0002810 Simmondsia chinensis HOM05D007042 ORTHO05D008441 1.2e-50 203.8 161 62.1
PSO170G0149 Papaver somniferum HOM05D007042 ORTHO05D008441 2.7e-50 202.6 199 54.8
Lalb_Chr20g0113621 Lupinus albus HOM05D007042 ORTHO05D008441 7.8e-50 201.1 187 56.1
PSO063G2627 Papaver somniferum HOM05D007042 ORTHO05D008441 7.8e-50 201.1 197 55.3
FvH4_2g20510 Fragaria vesca HOM05D007042 ORTHO05D008441 6.6e-49 198.0 176 55.7
Aa31LG8G17370 Aethionema arabicum HOM05D007042 ORTHO05D008441 1.9e-48 196.4 174 57.5
SHI26738 Sapria himalayana HOM05D007042 ORTHO05D008441 2.4e-46 189.5 160 57.5
FAN15G2210 Fragaria x ananassa HOM05D007042 ORTHO05D008441 3.1e-46 189.1 148 60.1
FAN24G0975 Fragaria x ananassa HOM05D003075 ORTHO05D003430 3.1e-46 189.1 148 60.1
HPP92_014817 Vanilla planifolia HOM05D007042 ORTHO05D008441 8.9e-46 187.6 191 51.3
FAN27G0500 Fragaria x ananassa HOM05D007042 ORTHO05D008441 3.8e-44 182.2 141 61.0
Sabra02G0195200 Salix brachista HOM05D007042 ORTHO05D008441 5.4e-43 178.3 127 67.7
TPR.G20062 Trifolium pratense HOM05D007042 ORTHO05D008441 3.9e-41 172.2 127 69.3
Zm00001eb088930 Zea mays HOM05D007042 ORTHO05D008441 1.5e-40 170.2 148 52.0
COL.COLO4_03573 Corchorus olitorius HOM05D007042 ORTHO05D008441 2.6e-37 159.5 109 73.4
Zm00001eb307520 Zea mays HOM05D007042 ORTHO05D008441 7.1e-35 151.4 135 51.9
SEGI_30132 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 9.3e-35 151.0 150 48.7
CDE04G2760 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 1.0e-33 147.5 92 76.1
Os04g0129600 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 3.0e-33 146.0 118 54.2
Os02g0754800 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 3.9e-33 145.6 122 60.7
FAN27G0749 Fragaria x ananassa HOM05D003075 ORTHO05D003430 7.3e-32 141.4 101 64.4
SHI06358 Sapria himalayana HOM05D007042 ORTHO05D008441 2.2e-28 129.8 112 56.2
AagrBONN_evm.TU.Sc2ySwM_228.1144 Anthoceros agrestis HOM05D007042 ORTHO05D008441 3.0e-25 119.4 138 45.7
SEGI_30900 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 4.0e-22 109.0 100 52.0
TPR.G20307 Trifolium pratense HOM05D007042 ORTHO05D008441 2.5e-19 99.8 71 64.8
Mapoly0078s0039 Marchantia polymorpha HOM05D007042 ORTHO05D008441 1.3e-17 94.0 148 42.6
SMO116G0088 Selaginella moellendorffii HOM05D001526 ORTHO05D008441 1.3e-17 94.0 126 39.7
Pp3c18_10950 Physcomitrium patens HOM05D007042 ORTHO05D008441 9.0e-14 81.3 121 36.4
Potri.014G193150 Populus trichocarpa HOM05D007042 ORTHO05D008441 3.0e-09 66.2 64 54.7
EL10As2g23173 Beta vulgaris HOM05D007042 ORTHO05D008441 1.9e-08 63.5 52 50.0
Cre13.g604300 Chlamydomonas reinhardtii HOM05D007042 ORTHO05D008441 2.5e-08 63.2 135 26.7


User provided reference genes

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