Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400027426 Solanum tuberosum HOM05D005514 ORTHO05D006563 3.6e-150 535.0 297 100.0
Solyc05g018340.4 Solanum lycopersicum HOM05D005514 ORTHO05D006563 2.0e-145 519.2 295 97.6
Sopen05g015140 Solanum pennellii HOM05D005514 ORTHO05D006563 2.0e-145 519.2 295 97.6
CAN.G148.5 Capsicum annuum HOM05D005514 ORTHO05D006563 3.4e-124 448.7 295 76.9
Nitab4.5_0000952g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 1.1e-122 443.7 295 77.6
Nitab4.5_0000010g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 5.4e-122 441.4 289 76.1
Peaxi162Scf00031g00232 Petunia axillaris HOM05D005514 ORTHO05D006563 9.2e-114 414.1 296 70.6
Oeu002248.1 Olea europaea HOM05D005514 ORTHO05D006563 1.0e-88 330.9 298 63.1
Dinv41624 Davidia involucrata HOM05D005514 ORTHO05D006563 1.3e-88 330.5 296 60.5
Thecc.09G107100 Theobroma cacao HOM05D005514 ORTHO05D006563 9.6e-87 324.3 298 58.7
Cc06_g09930 Coffea canephora HOM05D005514 ORTHO05D006563 5.3e-85 318.5 301 57.8
Duzib168G0165 Durio zibethinus HOM05D005514 ORTHO05D006563 5.3e-85 318.5 298 56.7
Hma1.2p1_1151F.1_g261950 Hydrangea macrophylla HOM05D005514 ORTHO05D006563 9.0e-85 317.8 292 57.2
QL02p045925 Quercus lobata HOM05D005514 ORTHO05D006563 9.9e-84 314.3 304 59.9
Dinv36656 Davidia involucrata HOM05D005514 ORTHO05D006563 2.9e-83 312.8 297 58.2
CiPaw.03G229100 Carya illinoinensis HOM05D005514 ORTHO05D006563 1.8e-80 303.5 295 58.6
Gohir.D08G262600 Gossypium hirsutum HOM05D005514 ORTHO05D006563 5.1e-80 302.0 300 56.0
Cfa003235 Carpinus fangiana HOM05D005514 ORTHO05D006563 4.3e-79 298.9 303 59.7
CiPaw.04G162600 Carya illinoinensis HOM05D005514 ORTHO05D006563 4.8e-78 295.4 296 54.4
AUR62010955 Chenopodium quinoa HOM05D005514 ORTHO05D006563 8.2e-78 294.7 301 55.1
Manes.03G023100 Manihot esculenta HOM05D005514 ORTHO05D006563 1.4e-77 293.9 291 57.7
Gorai.004G280600 Gossypium raimondii HOM05D005514 ORTHO05D006563 1.8e-77 293.5 300 58.7
Sabra06G0124000 Salix brachista HOM05D005514 ORTHO05D006563 7.6e-76 288.1 296 55.4
Gohir.A08G241800 Gossypium hirsutum HOM05D005514 ORTHO05D006563 1.3e-75 287.3 299 56.9
vmacro06229 Vaccinium macrocarpon HOM05D005514 ORTHO05D006563 1.3e-75 287.3 304 53.9
Ca_25539_v3 Cicer arietinum L. HOM05D005514 ORTHO05D006563 2.9e-75 286.2 306 51.6
Glyma.09G192400 Glycine max HOM05D005514 ORTHO05D006563 4.9e-75 285.4 297 56.9
EL10Ac8g18440 Beta vulgaris HOM05D005514 ORTHO05D006563 1.1e-74 284.3 304 55.9
Actinidia32673 Actinidia chinensis HOM05D005514 ORTHO05D006563 2.5e-74 283.1 293 54.3
Prupe.7G234000 Prunus persica HOM05D005514 ORTHO05D006563 6.0e-73 278.5 295 57.6
MSTRG.10624 Avicennia marina HOM05D005514 ORTHO05D006563 2.3e-72 276.6 290 52.1
Actinidia07405 Actinidia chinensis HOM05D005514 ORTHO05D006563 6.7e-72 275.0 294 54.4
CANSAT02G0006 Cannabis sativa HOM05D005514 ORTHO05D006563 6.7e-72 275.0 296 52.4
arahy.Tifrunner.gnm1.ann1.LW2ZPS Arachis hypogaea HOM05D005514 ORTHO05D006563 8.7e-72 274.6 297 52.9
Ciclev10008655m.g Citrus clementina HOM05D005514 ORTHO05D006563 1.1e-71 274.2 310 53.5
Lalb_Chr22g0352701 Lupinus albus HOM05D005514 ORTHO05D006563 1.5e-71 273.9 295 55.9
VMungo0464G0467 Vigna mungo HOM05D005514 ORTHO05D006563 1.5e-71 273.9 296 56.8
CSS0000167 Camellia sinensis var. sinensis HOM05D005514 ORTHO05D006563 2.5e-71 273.1 307 51.5
Atru.chr7.1371 Acer truncatum HOM05D005514 ORTHO05D006563 3.3e-71 272.7 311 54.0
Glyma.07G084500 Glycine max HOM05D005514 ORTHO05D006563 4.3e-71 272.3 299 53.5
Phvul.004G165700 Phaseolus vulgaris HOM05D005514 ORTHO05D006563 4.3e-71 272.3 296 53.7
arahy.Tifrunner.gnm1.ann1.7WD3SA Arachis hypogaea HOM05D005514 ORTHO05D006563 5.7e-71 271.9 297 52.5
MD02G1042900 Malus domestica HOM05D005514 ORTHO05D006563 5.7e-71 271.9 303 51.5
Eucgr.C01267 Eucalyptus grandis HOM05D005514 ORTHO05D006563 6.3e-70 268.5 300 52.0
Medtr6g087890 Medicago truncatula HOM05D005514 ORTHO05D006563 6.3e-70 268.5 305 52.5
Lalb_Chr24g0397401 Lupinus albus HOM05D005514 ORTHO05D006563 9.0e-69 264.6 294 50.0
DCAR_028696 Daucus carota HOM05D005514 ORTHO05D006563 1.5e-68 263.8 332 56.0
Oeu064593.1 Olea europaea HOM05D005514 ORTHO05D006563 7.7e-68 261.5 332 50.9
RcHm_v2.0_Chr2g0089981 Rosa chinensis HOM05D005514 ORTHO05D006563 2.9e-67 259.6 308 51.6
Hund09218 Selenicereus undatus HOM05D005514 ORTHO05D006563 2.9e-67 259.6 292 52.4
AUR62021464 Chenopodium quinoa HOM05D005514 ORTHO05D006563 8.5e-67 258.1 294 56.5
Duzib150G0489 Durio zibethinus HOM05D005514 ORTHO05D006563 1.1e-66 257.7 300 49.7
Lj2g0026530 Lotus japonicus HOM05D005514 ORTHO05D006563 1.4e-66 257.3 352 47.7
TWI23G1143 Tripterygium wilfordii HOM05D005514 ORTHO05D006563 1.6e-65 253.8 290 49.3
TPR.G10049 Trifolium pratense HOM05D005514 ORTHO05D006563 2.7e-65 253.1 335 49.6
FvH4_1g04330 Fragaria vesca HOM05D005514 ORTHO05D006563 3.6e-65 252.7 307 51.5
Psat1g044240 Pisum sativum HOM05D005514 ORTHO05D006563 3.0e-64 249.6 320 47.5
ClCG06G008760 Citrullus lanatus HOM05D005514 ORTHO05D006563 5.1e-64 248.8 308 48.4
FAN26G2817 Fragaria x ananassa HOM05D005514 ORTHO05D006563 8.8e-64 248.1 308 50.0
MD15G1181700 Malus domestica HOM05D005514 ORTHO05D006563 3.3e-63 246.1 300 54.3
CsaV3_1G045730 Cucumis sativus L. HOM05D005514 ORTHO05D006563 9.7e-63 244.6 309 48.2
FAN19G0406 Fragaria x ananassa HOM05D005514 ORTHO05D006563 9.7e-63 244.6 308 50.3
FAN23G0542 Fragaria x ananassa HOM05D005514 ORTHO05D006563 1.3e-62 244.2 305 50.5
Ah.07g205470 Amaranthus hybridus HOM05D005514 ORTHO05D006563 2.8e-62 243.0 303 50.8
MELO3C024688.2 Cucumis melo HOM05D005514 ORTHO05D006563 4.8e-62 242.3 309 47.9
TAR383G0343 Trochodendron aralioides HOM05D001777 ORTHO05D001809 5.3e-61 238.8 298 49.7
MSTRG.26360 Avicennia marina HOM05D005514 ORTHO05D006563 1.5e-60 237.3 299 45.8
Lalb_Chr14g0371621 Lupinus albus HOM05D005514 ORTHO05D006563 4.5e-60 235.7 292 48.3
HanXRQChr10g0318661 Helianthus annuus HOM05D005514 ORTHO05D006563 5.9e-60 235.3 328 49.7
Cpa.g.sc23.79 Carica papaya HOM05D005514 ORTHO05D006563 5.0e-59 232.3 231 54.1
Sc18g0001310 Simmondsia chinensis HOM05D005514 ORTHO05D006563 1.4e-58 230.7 301 53.5
Potri.006G160500 Populus trichocarpa HOM05D005514 ORTHO05D006563 2.7e-57 226.5 297 48.8
Sed0026603 Sechium edule HOM05D005514 ORTHO05D006563 5.7e-55 218.8 369 38.5
Potri.018G083100 Populus trichocarpa HOM05D005514 ORTHO05D006563 1.3e-54 217.6 315 45.1
COL.COLO4_34823 Corchorus olitorius HOM05D005514 ORTHO05D006563 5.3e-53 212.2 299 45.5
Sed0015833 Sechium edule HOM05D005514 ORTHO05D006563 1.5e-52 210.7 305 44.6
TAR624G0612 Trochodendron aralioides HOM05D005514 ORTHO05D006563 1.5e-52 210.7 277 44.4
PSO566G0157 Papaver somniferum HOM05D005514 ORTHO05D006563 1.7e-51 207.2 317 49.2
PSO782G4531 Papaver somniferum HOM05D005514 ORTHO05D006563 1.7e-51 207.2 331 44.1
MBI04_g19180_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 8.5e-51 204.9 305 46.9
ECA234G0189 Erigeron canadensis HOM05D005514 ORTHO05D006563 1.9e-50 203.8 329 44.4
Lj7A655G38 Lonicera japonica HOM05D005514 ORTHO05D006563 9.4e-50 201.4 235 53.2
Nn2g11677 Nelumbo nucifera HOM05D005514 ORTHO05D006563 1.2e-49 201.1 301 43.5
Haze_25771 Corylus avellana HOM05D005514 ORTHO05D006563 4.7e-49 199.1 223 57.8
MBI14_g08031_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 6.1e-49 198.7 303 45.5
THA.LOC104804022 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 1.1e-47 194.5 293 44.7
GSVIVG01015362001 Vitis vinifera HOM05D005514 ORTHO05D006563 2.2e-46 190.3 167 67.1
Aqoxy7G01583 Aquilegia oxysepala HOM05D005514 ORTHO05D006563 8.2e-46 188.3 261 46.0
PGR142G2557 Punica granatum HOM05D005514 ORTHO05D006563 2.4e-45 186.8 296 42.9
ATR0315G038 Amborella trichopoda HOM05D005514 ORTHO05D006563 3.1e-45 186.4 313 51.1
THA.LOC104820053 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 2.9e-43 179.9 314 41.4
AL7G23470 Arabidopsis lyrata HOM05D005514 ORTHO05D006563 5.0e-43 179.1 326 42.3
Thhalv10025603m.g Eutrema salsugineum HOM05D005514 ORTHO05D006563 9.4e-42 174.9 322 42.9
Sp7g26930 Schrenkiella parvula HOM05D005514 ORTHO05D006563 6.8e-40 168.7 315 42.5
Aa31LG8G17060 Aethionema arabicum HOM05D005514 ORTHO05D006563 1.2e-39 167.9 308 41.6
CDE05G1480 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 5.7e-39 165.6 281 44.1
Carub.0007s1165 Capsella rubella HOM05D005514 ORTHO05D006563 3.7e-38 162.9 327 39.4
AT4G28990 Arabidopsis thaliana HOM05D005514 ORTHO05D006563 3.1e-37 159.8 324 39.5
SEGI_01979 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 1.2e-36 157.9 283 40.3
CARHR236720 Cardamine hirsuta HOM05D005514 ORTHO05D006563 1.6e-36 157.5 323 41.2
A01p08990 Brassica napus HOM05D001777 ORTHO05D006510 2.0e-36 157.1 304 42.8
BcaNung00443 Brassica carinata HOM05D005514 ORTHO05D006563 5.9e-36 155.6 315 41.3
BolC1t01016H Brassica oleracea HOM05D001777 ORTHO05D006510 1.3e-35 154.5 303 41.3
Migut.K00501 Erythranthe guttata HOM05D005514 ORTHO05D006563 2.9e-35 153.3 294 41.5
Rhsim03G0240000 Rhododendron simsii HOM05D005514 ORTHO05D006563 6.5e-35 152.1 207 47.3
BcaNung01339 Brassica carinata HOM05D005514 ORTHO05D006563 3.2e-34 149.8 310 41.6
C01p10530 Brassica napus HOM05D001777 ORTHO05D006510 5.5e-34 149.1 304 40.8
BraA03t14917Z Brassica rapa HOM05D005514 ORTHO05D006563 1.0e-32 144.8 285 40.0
Lsat_1_v5_gn_5_102941 Lactuca sativa HOM05D005514 ORTHO05D006563 4.0e-32 142.9 235 49.4
Nn3g18098 Nelumbo nucifera HOM05D005514 ORTHO05D006563 1.5e-31 141.0 117 57.3
Sabra18G0070900 Salix brachista HOM05D005514 ORTHO05D006563 8.3e-30 135.2 197 38.6
Os06g0332900 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 1.8e-29 134.0 298 36.6
BcaNung00440 Brassica carinata HOM05D005514 ORTHO05D006563 5.4e-29 132.5 337 37.1
CDE05G2615 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 5.4e-29 132.5 292 38.4
BcaNung02893 Brassica carinata HOM05D005514 ORTHO05D006563 7.7e-28 128.6 315 37.5
C07p56560 Brassica napus HOM05D005514 ORTHO05D006563 7.7e-28 128.6 315 37.5
Zm00001eb147430 Zea mays HOM05D005514 ORTHO05D006563 1.0e-27 128.3 310 35.5
BcaC09g51675 Brassica carinata HOM05D005514 ORTHO05D006563 1.3e-27 127.9 293 38.2
BolC7t46134H Brassica oleracea HOM05D005514 ORTHO05D006563 5.5e-26 122.5 288 38.2
Os02g0274700 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 1.3e-19 101.3 285 32.6
SGA_v2.0_scaffold92G28280 Striga asiatica HOM05D005514 ORTHO05D006563 3.9e-19 99.8 132 46.2
SEGI_18875 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 3.3e-18 96.7 322 32.9
Mapoly0001s0121 Marchantia polymorpha HOM05D005514 ORTHO05D006563 2.3e-16 90.5 312 35.3
HPP92_000517 Vanilla planifolia HOM05D005514 ORTHO05D006563 7.0e-13 79.0 309 31.4
Pp3c14_23580 Physcomitrium patens HOM05D005514 ORTHO05D006563 1.6e-12 77.8 322 28.9
SMO169G0168 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 6.0e-12 75.9 136 39.0
SMO116G0230 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 2.1e-09 67.4 37 70.3
CBR_g44542 Chara braunii HOM05D005514 ORTHO05D006563 3.4e-07 60.1 37 62.2
unitig_0.g2554 Utricularia gibba HOM05D005514 ORTHO05D006563 3.4e-07 60.1 136 31.6
AagrBONN_evm.TU.Sc2ySwM_344.197 Anthoceros agrestis HOM05D005514 ORTHO05D006563 1.7e-06 57.8 120 37.5
GSVIVG01030073001 Vitis vinifera HOM05D000417 ORTHO05D000342 6.4e-06 55.8 38 63.2


User provided reference genes

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