Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400027311 Solanum tuberosum HOM05D009634 ORTHO05D009650 2.9e-74 282.0 160 100.0
Sopen11g003360 Solanum pennellii HOM05D009634 ORTHO05D009650 3.6e-64 248.4 158 88.6
Solyc11g007520.1 Solanum lycopersicum HOM05D009634 ORTHO05D009650 1.5e-62 243.0 160 87.5
PGSC0003DMG400027312 Solanum tuberosum HOM05D009634 ORTHO05D009650 3.4e-62 241.9 131 94.7
CAN.G135.81 Capsicum annuum HOM05D009634 ORTHO05D009650 3.4e-54 215.3 159 81.8
Nitab4.5_0001850g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 1.2e-48 196.8 161 74.5
Nitab4.5_0002878g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 4.0e-47 191.8 166 74.7
Peaxi162Scf00244g00074 Petunia axillaris HOM05D009634 ORTHO05D009650 2.4e-44 182.6 141 75.9
Nitab4.5_0001850g0030 Nicotiana tabacum HOM05D009634 ORTHO05D009650 1.0e-18 97.4 67 74.6
Peaxi162Scf00244g00075 Petunia axillaris HOM05D009634 ORTHO05D009650 1.3e-16 90.5 112 44.6
Nitab4.5_0002878g0060 Nicotiana tabacum HOM05D009634 ORTHO05D009650 4.8e-16 88.6 105 50.5
Nitab4.5_0002878g0050 Nicotiana tabacum HOM05D009634 ORTHO05D009650 1.4e-15 87.0 134 40.3
Nitab4.5_0012334g0020 Nicotiana tabacum HOM05D009634 ORTHO05D009650 2.4e-15 86.3 105 49.5
SalBow6G4194 Salvia bowleyana HOM05D009634 ORTHO05D009650 2.4e-15 86.3 122 42.6
Oeu026565.1 Olea europaea HOM05D009634 ORTHO05D009650 2.6e-14 82.8 104 46.2
SGA_v2.0_scaffold13G06494 Striga asiatica HOM05D009634 ORTHO05D009650 3.4e-14 82.4 114 43.9
Migut.F00890 Erythranthe guttata HOM05D009634 ORTHO05D009650 7.6e-14 81.3 107 45.8
SalBow6G2478 Salvia bowleyana HOM05D009634 ORTHO05D009650 2.2e-13 79.7 105 44.8
SalBow6G5252 Salvia bowleyana HOM05D009634 ORTHO05D009650 2.2e-13 79.7 105 44.8
Oeu059859.1 Olea europaea HOM05D009634 ORTHO05D009650 3.8e-13 79.0 104 44.2
Prupe.2G086100 Prunus persica HOM05D008140 ORTHO05D009650 6.5e-13 78.2 118 39.0
Migut.F00892 Erythranthe guttata HOM05D009634 ORTHO05D009650 4.2e-12 75.5 106 44.3
Cfa011231 Carpinus fangiana HOM05D008140 ORTHO05D009650 2.1e-11 73.2 139 36.0
Ciclev10033301m.g Citrus clementina HOM05D008140 ORTHO05D009650 4.6e-11 72.0 103 42.7
Haze_02597 Corylus avellana HOM05D008140 ORTHO05D009650 1.0e-10 70.9 138 37.0
Cfa011233 Carpinus fangiana HOM05D008140 ORTHO05D009650 1.1e-09 67.4 102 38.2
RcHm_v2.0_Chr1g0333151 Rosa chinensis HOM05D008140 ORTHO05D009650 1.5e-09 67.0 134 35.8
Migut.F00891 Erythranthe guttata HOM05D009634 ORTHO05D009650 2.5e-09 66.2 113 38.9
QL04p042101 Quercus lobata HOM05D008140 ORTHO05D009650 2.5e-09 66.2 120 35.8
Rhsim03G0105800 Rhododendron simsii HOM05D008140 ORTHO05D009650 2.5e-09 66.2 101 43.6
MD07G1068400 Malus domestica HOM05D008140 ORTHO05D009650 3.3e-09 65.9 116 35.3
Manes.07G090200 Manihot esculenta HOM05D008140 ORTHO05D009650 3.3e-09 65.9 104 39.4
RcHm_v2.0_Chr1g0333141 Rosa chinensis HOM05D008140 ORTHO05D009650 5.7e-09 65.1 134 35.1
FAN01G1993 Fragaria x ananassa HOM05D008140 ORTHO05D009650 7.4e-09 64.7 113 33.6
Duzib106G0172 Durio zibethinus HOM05D008140 ORTHO05D009650 9.7e-09 64.3 125 33.6
QL04p041477 Quercus lobata HOM05D008140 ORTHO05D009650 1.6e-08 63.5 143 34.3
Thecc.10G110900 Theobroma cacao HOM05D008140 ORTHO05D009650 1.6e-08 63.5 145 38.6
COL.COLO4_06812 Corchorus olitorius HOM05D008140 ORTHO05D009650 3.7e-08 62.4 144 33.3
FvH4_7g05940 Fragaria vesca HOM05D008140 ORTHO05D009650 4.8e-08 62.0 113 32.7
FAN06G2722 Fragaria x ananassa HOM05D008140 ORTHO05D009650 4.8e-08 62.0 113 32.7
Nitab4.5_0001027g0050 Nicotiana tabacum HOM05D009634 ORTHO05D009650 6.3e-08 61.6 87 43.7
FAN03G1479 Fragaria x ananassa HOM05D008140 ORTHO05D009650 8.2e-08 61.2 113 31.9
Ah.04g163690 Amaranthus hybridus HOM05D009634 ORTHO05D009650 1.1e-07 60.8 90 41.1
Potri.008G025200 Populus trichocarpa HOM05D008140 ORTHO05D009650 1.1e-07 60.8 104 38.5
Cfa011234 Carpinus fangiana HOM05D008140 ORTHO05D009650 1.4e-07 60.5 119 33.6
FAN10G4346 Fragaria x ananassa HOM05D008140 ORTHO05D009650 1.8e-07 60.1 113 31.9
Potri.010G235400 Populus trichocarpa HOM05D008140 ORTHO05D009650 2.4e-07 59.7 103 36.9
Potri.008G025100 Populus trichocarpa HOM05D008140 ORTHO05D009650 4.1e-07 58.9 104 38.5
Solyc05g055370.1 Solanum lycopersicum HOM05D009634 ORTHO05D009650 4.1e-07 58.9 90 45.6
Haze_02595 Corylus avellana HOM05D008140 ORTHO05D009650 6.9e-07 58.2 127 32.3
Sabra10G0182500 Salix brachista HOM05D008140 ORTHO05D009650 9.0e-07 57.8 103 35.0
Sabra08G0016900 Salix brachista HOM05D008140 ORTHO05D009650 1.2e-06 57.4 105 39.0
CiPaw.13G036800 Carya illinoinensis HOM05D008140 ORTHO05D009650 3.4e-06 55.8 95 35.8
Haze_02596 Corylus avellana HOM05D008140 ORTHO05D009650 5.9e-06 55.1 115 32.2
Lalb_Chr06g0170171 Lupinus albus HOM05D008140 ORTHO05D009650 1.0e-05 54.3 98 33.7
Sp4g21180 Schrenkiella parvula HOM05D008140 ORTHO05D009650 1.0e-05 54.3 103 34.0


User provided reference genes

Program Settings