Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 2.2e-151 538.9 261 100.0
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 1.1e-147 526.6 261 96.6
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 2.1e-146 522.3 261 95.8
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 9.8e-144 513.5 261 92.7
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 2.9e-143 511.9 261 93.1
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 1.1e-123 446.8 261 83.5
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 6.2e-114 414.5 264 74.2
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 2.1e-109 399.4 253 74.3
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 7.9e-109 397.5 260 71.9
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 1.3e-108 396.7 257 71.2
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 1.3e-108 396.7 264 69.7
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 1.7e-108 396.4 256 71.5
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 1.7e-108 396.4 261 70.1
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 5.6e-107 391.3 266 72.2
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 5.6e-107 391.3 267 70.0
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 2.1e-106 389.4 253 71.5
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 2.1e-106 389.4 256 69.1
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 2.8e-106 389.0 264 68.6
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 6.2e-106 387.9 256 70.3
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 2.4e-105 386.0 253 72.7
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 1.2e-104 383.6 253 69.6
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 3.4e-104 382.1 257 69.6
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 4.5e-104 381.7 258 69.8
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 5.8e-104 381.3 256 69.1
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 5.8e-104 381.3 263 67.7
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 1.3e-103 380.2 257 71.6
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 4.9e-103 378.3 264 67.8
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 6.4e-103 377.9 256 68.8
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 1.1e-102 377.1 253 70.8
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 1.9e-102 376.3 253 68.4
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 5.5e-102 374.8 253 68.4
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 1.6e-101 373.2 262 67.9
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 1.1e-99 367.1 257 68.1
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 1.5e-99 366.7 253 67.2
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 2.5e-99 365.9 253 68.0
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 3.3e-99 365.5 253 67.2
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 9.6e-99 364.0 254 67.3
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 1.6e-98 363.2 257 67.3
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 3.7e-98 362.1 253 66.4
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 4.8e-98 361.7 265 66.8
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 2.4e-97 359.4 296 58.4
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 6.9e-97 357.8 262 66.8
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 6.9e-97 357.8 255 66.3
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 9.0e-97 357.5 255 65.5
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 9.0e-97 357.5 220 75.0
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 2.0e-96 356.3 262 66.4
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 5.8e-96 354.8 253 64.0
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 5.8e-96 354.8 253 66.4
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 1.7e-95 353.2 254 65.4
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 1.7e-95 353.2 255 67.1
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.9e-95 352.4 254 66.5
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 2.9e-95 352.4 263 63.9
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 3.8e-95 352.1 254 66.1
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 3.8e-95 352.1 254 65.7
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 6.5e-95 351.3 254 66.1
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 3.2e-94 349.0 253 65.2
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 7.1e-94 347.8 253 65.6
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 1.6e-93 346.7 260 63.8
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 1.8e-92 343.2 254 64.6
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 3.9e-92 342.0 253 62.5
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 5.1e-92 341.7 254 64.2
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 1.1e-91 340.5 264 63.3
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.5e-88 330.1 246 64.6
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 2.6e-88 329.3 225 67.6
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 2.6e-88 329.3 255 62.4
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 6.5e-87 324.7 265 61.1
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 6.1e-85 318.2 255 62.4
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 1.1e-81 307.4 210 70.0
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 6.5e-79 298.1 220 61.4
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 4.2e-78 295.4 262 58.0
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 7.2e-78 294.7 255 56.9
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 1.1e-70 270.8 224 57.1
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 3.2e-70 269.2 179 71.5
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 7.9e-69 264.6 178 70.2
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 2.3e-68 263.1 228 56.6
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 1.6e-64 250.4 207 59.9
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 1.6e-64 250.4 207 59.9
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 1.7e-58 230.3 179 58.1
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 7.2e-54 214.9 161 62.1
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 4.7e-53 212.2 282 43.6
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 6.1e-53 211.8 181 58.0
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 6.8e-52 208.4 132 72.0
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 2.1e-45 186.8 121 71.9
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 2.6e-43 179.9 192 47.9
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 4.4e-43 179.1 131 65.6
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 8.0e-37 158.3 153 52.3
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 5.2e-36 155.6 133 57.9
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 8.6e-31 138.3 117 57.3
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 3.3e-30 136.3 106 60.4
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 1.2e-29 134.4 315 31.1
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 3.6e-29 132.9 315 31.1
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 2.0e-24 117.1 97 60.8
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 1.1e-22 111.3 92 56.5
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 1.4e-20 104.4 58 75.9
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 3.1e-20 103.2 58 74.1
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 3.9e-15 86.3 75 54.7
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 1.4e-12 77.8 64 56.2


User provided reference genes

Program Settings