Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400027080 Solanum tuberosum HOM05D004617 ORTHO05D005531 5.3e-168 594.3 316 100.0
Sopen06g027890 Solanum pennellii HOM05D004617 ORTHO05D005531 2.6e-151 538.9 313 93.3
Solyc06g071600.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 2.1e-148 529.3 314 91.1
CAN.G993.37 Capsicum annuum HOM05D004617 ORTHO05D005531 9.8e-130 467.2 309 82.2
Nitab4.5_0001284g0070 Nicotiana tabacum HOM05D004617 ORTHO05D005531 3.0e-102 375.9 318 65.7
Nitab4.5_0011992g0040 Nicotiana tabacum HOM05D004617 ORTHO05D005531 5.1e-102 375.2 318 65.7
Nitab4.5_0003918g0030 Nicotiana tabacum HOM05D004617 ORTHO05D005531 1.5e-98 363.6 311 64.6
CAN.G338.4 Capsicum annuum HOM05D004617 ORTHO05D005531 3.4e-98 362.5 310 64.8
Sopen03g031610 Solanum pennellii HOM05D004617 ORTHO05D005531 5.8e-98 361.7 307 67.4
Solyc03g112550.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 2.2e-97 359.8 307 66.8
PGSC0003DMG400018106 Solanum tuberosum HOM05D004617 ORTHO05D005531 2.2e-97 359.8 304 66.1
Dinv38556 Davidia involucrata HOM05D004617 ORTHO05D005531 3.8e-89 332.4 316 59.2
CSS0013084 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 7.8e-87 324.7 316 57.9
Cc04_g12560 Coffea canephora HOM05D004617 ORTHO05D005531 1.0e-86 324.3 304 59.5
Rhsim12G0166500 Rhododendron simsii HOM05D004617 ORTHO05D005531 1.3e-86 323.9 353 52.4
CSS0042906 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 1.7e-86 323.6 316 57.6
Dinv20620 Davidia involucrata HOM05D004617 ORTHO05D005531 5.6e-85 318.5 316 56.3
Peaxi162Scf00089g01634 Petunia axillaris HOM05D004617 ORTHO05D005531 2.0e-82 310.1 304 59.9
vmacro16629 Vaccinium macrocarpon HOM05D004617 ORTHO05D005531 1.3e-81 307.4 339 52.5
TAR629G3522 Trochodendron aralioides HOM05D004617 ORTHO05D005531 1.2e-79 300.8 311 55.6
GSVIVG01007687001 Vitis vinifera HOM05D004617 ORTHO05D005531 3.5e-79 299.3 316 52.8
Oeu001681.1 Olea europaea HOM05D004617 ORTHO05D005531 2.8e-76 289.7 317 53.6
MSTRG.23154 Avicennia marina HOM05D004617 ORTHO05D005531 3.8e-73 279.3 315 50.8
Migut.O00131 Erythranthe guttata HOM05D004617 ORTHO05D005531 1.1e-72 277.7 315 51.7
MSTRG.11480 Avicennia marina HOM05D004617 ORTHO05D005531 4.2e-72 275.8 305 51.5
DCAR_021575 Daucus carota HOM05D004617 ORTHO05D005531 5.1e-70 268.9 309 51.1
Lj9A445T80 Lonicera japonica HOM05D004617 ORTHO05D005531 1.9e-69 266.9 368 45.1
Haze_07552 Corylus avellana HOM05D004617 ORTHO05D005531 3.3e-69 266.2 336 49.4
Hund09456 Selenicereus undatus HOM05D004617 ORTHO05D005531 1.6e-68 263.8 310 49.7
Sc04g0001670 Simmondsia chinensis HOM05D004617 ORTHO05D005531 1.6e-68 263.8 315 47.6
ECA246G2887 Erigeron canadensis HOM05D004617 ORTHO05D005531 2.8e-68 263.1 314 48.4
Hma1.2p1_0046F.1_g026830 Hydrangea macrophylla HOM05D004617 ORTHO05D005531 1.1e-67 261.2 333 47.1
Potri.015G080900 Populus trichocarpa HOM05D004617 ORTHO05D005531 1.1e-67 261.2 311 49.2
PSO478G3702 Papaver somniferum HOM05D004617 ORTHO05D005531 2.6e-66 256.5 306 47.4
Sed0022669 Sechium edule HOM05D004617 ORTHO05D005531 2.6e-66 256.5 317 48.9
HanXRQChr05g0154591 Helianthus annuus HOM05D004617 ORTHO05D005531 3.4e-66 256.1 316 47.5
TWI39G0523 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 7.6e-66 255.0 326 46.3
Atru.chr9.2539 Acer truncatum HOM05D004617 ORTHO05D005531 4.9e-65 252.3 343 46.9
Lsat_1_v5_gn_5_15901 Lactuca sativa HOM05D004617 ORTHO05D005531 6.5e-65 251.9 309 49.5
Potri.012G088000 Populus trichocarpa HOM05D004617 ORTHO05D005531 8.4e-65 251.5 315 47.9
Sc12g0005180 Simmondsia chinensis HOM05D004617 ORTHO05D005531 1.9e-64 250.4 342 43.6
MD14G1175700 Malus domestica HOM05D004617 ORTHO05D005531 3.2e-64 249.6 307 48.2
CiPaw.12G028900 Carya illinoinensis HOM05D004617 ORTHO05D005531 4.2e-64 249.2 310 48.4
PSO017G2275 Papaver somniferum HOM05D004617 ORTHO05D005531 7.1e-64 248.4 306 46.4
Nn4g22667 Nelumbo nucifera HOM05D004617 ORTHO05D005531 9.3e-64 248.1 269 52.4
Potri.T124408 Populus trichocarpa HOM05D004617 ORTHO05D005531 9.3e-64 248.1 301 49.2
QL10p008526 Quercus lobata HOM05D004617 ORTHO05D005531 9.3e-64 248.1 297 49.8
RcHm_v2.0_Chr7g0193001 Rosa chinensis HOM05D004617 ORTHO05D005531 9.3e-64 248.1 308 48.1
MD06G1170100 Malus domestica HOM05D004617 ORTHO05D005531 1.2e-63 247.7 308 46.4
QL10p008663 Quercus lobata HOM05D004617 ORTHO05D005531 3.5e-63 246.1 296 49.7
Manes.06G108000 Manihot esculenta HOM05D004617 ORTHO05D005531 4.6e-63 245.7 303 47.2
COL.COLO4_30121 Corchorus olitorius HOM05D004617 ORTHO05D005531 1.3e-62 244.2 263 55.1
PGR044G1277 Punica granatum HOM05D004617 ORTHO05D005531 1.8e-62 243.8 306 47.4
Lalb_Chr23g0273321 Lupinus albus HOM05D004617 ORTHO05D005531 5.1e-62 242.3 292 47.3
CiPaw.11G022700 Carya illinoinensis HOM05D004617 ORTHO05D005531 1.1e-61 241.1 305 48.2
CsaV3_1G001290 Cucumis sativus L. HOM05D004617 ORTHO05D005531 1.5e-61 240.7 317 47.3
Ciclev10020950m.g Citrus clementina HOM05D004617 ORTHO05D005531 5.7e-61 238.8 273 49.8
Duzib205G1820 Durio zibethinus HOM05D004617 ORTHO05D005531 2.8e-60 236.5 275 52.4
SGA_v2.0_scaffold90G27877 Striga asiatica HOM05D004617 ORTHO05D005531 2.8e-60 236.5 315 44.8
Aqoxy3G01097 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 8.2e-60 235.0 310 45.5
MELO3C026277.2 Cucumis melo HOM05D004617 ORTHO05D005531 8.2e-60 235.0 316 46.2
Cpa.g.sc153.19 Carica papaya HOM05D004617 ORTHO05D005531 1.4e-59 234.2 301 45.8
TWI23G0363 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 2.4e-59 233.4 326 44.5
Glyma.05G040000 Glycine max HOM05D004617 ORTHO05D005531 3.4e-58 229.6 303 44.9
Lj4g0013782 Lotus japonicus HOM05D004617 ORTHO05D005531 3.4e-58 229.6 306 44.1
Thecc.03G024100 Theobroma cacao HOM05D004617 ORTHO05D005531 3.4e-58 229.6 275 49.8
AUR62029851 Chenopodium quinoa HOM05D004617 ORTHO05D005531 1.3e-57 227.6 306 46.1
Actinidia19118 Actinidia chinensis HOM05D004617 ORTHO05D005531 2.2e-57 226.9 225 55.6
arahy.Tifrunner.gnm1.ann1.B97T9I Arachis hypogaea HOM05D004617 ORTHO05D005531 2.9e-57 226.5 297 44.4
CANSAT80G0933 Cannabis sativa HOM05D004617 ORTHO05D005531 2.9e-57 226.5 305 46.6
ClCG06G017200 Citrullus lanatus HOM05D004617 ORTHO05D005531 2.9e-57 226.5 315 45.7
EL10Ac5g10692 Beta vulgaris HOM05D004617 ORTHO05D005531 3.8e-57 226.1 235 50.2
FAN05G0977 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.4e-56 224.2 309 43.4
Gohir.A12G272900 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.4e-56 224.2 275 48.4
THA.LOC104818211 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 2.5e-56 223.4 310 43.2
Gorai.008G294000 Gossypium raimondii HOM05D004617 ORTHO05D005531 4.2e-56 222.6 266 49.6
Lj5A127T55 Lonicera japonica HOM05D004617 ORTHO05D005531 5.5e-56 222.2 245 53.9
arahy.Tifrunner.gnm1.ann1.P4R84V Arachis hypogaea HOM05D004617 ORTHO05D005531 9.3e-56 221.5 297 43.1
FvH4_6g24101 Fragaria vesca HOM05D004617 ORTHO05D005531 9.3e-56 221.5 309 43.0
FvH4_5g05820 Fragaria vesca HOM05D004617 ORTHO05D005531 1.2e-55 221.1 307 42.0
Sabra12G0062800 Salix brachista HOM05D004617 ORTHO05D005531 1.2e-55 221.1 363 41.3
Gohir.D12G273600 Gossypium hirsutum HOM05D004617 ORTHO05D005531 2.1e-55 220.3 275 47.6
Phvul.009G175700 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 1.8e-54 217.2 299 43.1
MBI16_g23858_MAGBIO Magnolia biondii HOM05D004617 ORTHO05D005531 3.9e-54 216.1 320 43.1
Sabra15G0104900 Salix brachista HOM05D004617 ORTHO05D005531 5.1e-54 215.7 355 41.4
FAN18G1615 Fragaria x ananassa HOM05D004617 ORTHO05D005531 6.7e-54 215.3 234 47.0
Phvul.003G203200 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 6.7e-54 215.3 297 43.4
FAN13G0632 Fragaria x ananassa HOM05D004617 ORTHO05D005531 9.7e-53 211.5 230 47.0
Gohir.A09G172500 Gossypium hirsutum HOM05D004617 ORTHO05D005531 9.7e-53 211.5 270 47.4
VMungo1215G2409 Vigna mungo HOM05D004617 ORTHO05D005531 1.3e-52 211.1 298 43.0
Prupe.5G169600 Prunus persica HOM05D004617 ORTHO05D005531 1.6e-52 210.7 315 42.2
Ca_21946_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 2.2e-52 210.3 320 41.6
THA.LOC104798968 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 2.8e-52 209.9 277 45.5
Aa31LG4G16830 Aethionema arabicum HOM05D004617 ORTHO05D005531 4.8e-52 209.1 316 41.1
Eucgr.K02817 Eucalyptus grandis HOM05D004617 ORTHO05D005531 4.8e-52 209.1 334 43.1
FAN08G0972 Fragaria x ananassa HOM05D004617 ORTHO05D005531 4.8e-52 209.1 304 42.8
AUR62028750 Chenopodium quinoa HOM05D004617 ORTHO05D005531 6.3e-52 208.8 281 44.5
SalBow5G0770 Salvia bowleyana HOM05D004617 ORTHO05D005531 1.4e-51 207.6 235 51.1
TPR.G37539 Trifolium pratense HOM05D004617 ORTHO05D005531 1.8e-51 207.2 287 43.6
SalBow5G2990 Salvia bowleyana HOM05D004617 ORTHO05D005531 4.1e-51 206.1 233 51.1
Gorai.006G189800 Gossypium raimondii HOM05D004617 ORTHO05D005531 9.0e-51 204.9 275 47.3
Carub.0005s1437 Capsella rubella HOM05D004617 ORTHO05D005531 5.9e-50 202.2 313 40.6
AUR62008173 Chenopodium quinoa HOM05D004617 ORTHO05D005531 5.9e-50 202.2 257 44.7
CARHR156970 Cardamine hirsuta HOM05D004617 ORTHO05D005531 2.9e-49 199.9 309 41.1
Ca_29672_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 1.6e-47 194.1 280 42.5
VMungo1309G0654 Vigna mungo HOM05D004617 ORTHO05D005531 2.1e-47 193.7 320 38.4
AL5G27600 Arabidopsis lyrata HOM05D004617 ORTHO05D005531 7.9e-47 191.8 314 39.5
Sp5g13810 Schrenkiella parvula HOM05D004617 ORTHO05D005531 1.8e-46 190.7 318 38.4
C03p66610 Brassica napus HOM05D004617 ORTHO05D005531 3.0e-46 189.9 315 37.1
Thhalv10010559m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 3.0e-46 189.9 313 37.7
Medtr4g105330 Medicago truncatula HOM05D004617 ORTHO05D005531 3.0e-46 189.9 307 40.7
BolC3t18931H Brassica oleracea HOM05D004617 ORTHO05D005531 3.9e-46 189.5 315 37.1
AT3G48210 Arabidopsis thaliana HOM05D004617 ORTHO05D005531 1.5e-45 187.6 309 39.8
BcaC01g02324 Brassica carinata HOM05D004617 ORTHO05D005531 1.5e-45 187.6 314 36.9
TAR371G0263 Trochodendron aralioides HOM05D004617 ORTHO05D005531 5.7e-45 185.7 185 55.1
unitig_0.g2533 Utricularia gibba HOM05D004617 ORTHO05D005531 1.3e-44 184.5 239 46.4
BcaB02g10666 Brassica carinata HOM05D004617 ORTHO05D005531 2.2e-44 183.7 310 36.5
DCAR_004467 Daucus carota HOM05D004617 ORTHO05D005531 8.2e-44 181.8 219 49.3
Psat4g059160 Pisum sativum HOM05D004617 ORTHO05D005531 1.4e-43 181.0 302 38.7
BraA06t25690Z Brassica rapa HOM05D004617 ORTHO05D005531 4.5e-42 176.0 316 36.1
A06p27500 Brassica napus HOM05D004617 ORTHO05D005531 5.9e-42 175.6 316 35.8
HPP92_011588 Vanilla planifolia HOM05D004617 ORTHO05D005531 7.7e-42 175.3 310 38.1
Thhalv10010553m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 1.3e-41 174.5 313 35.8
ATR1152G034 Amborella trichopoda HOM05D004617 ORTHO05D005531 3.2e-40 169.9 271 36.2
CDE05G2613 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 2.6e-37 160.2 207 43.5
Os05g0110700 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 3.3e-37 159.8 318 36.2
Cpa.g.sc153.20 Carica papaya HOM05D004617 ORTHO05D005531 5.3e-35 152.5 193 45.6
Gohir.D09G168200 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.5e-34 151.0 275 40.0
Os01g0973200 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 3.8e-33 146.4 311 33.4
Psat4g095560 Pisum sativum HOM05D004617 ORTHO05D005531 1.6e-31 141.0 309 33.7
CDE02G4133 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 2.7e-31 140.2 221 41.6
FAN02G3554 Fragaria x ananassa HOM05D004617 ORTHO05D005531 3.0e-30 136.7 131 49.6
Zm00001eb139780 Zea mays HOM05D004617 ORTHO05D005531 4.0e-30 136.3 238 34.9
SEGI_25965 Sequoiadendron giganteum HOM05D004617 ORTHO05D005531 9.7e-29 131.7 218 35.3
Zm00001eb362200 Zea mays HOM05D004617 ORTHO05D005531 3.5e-26 123.2 286 30.8
Glyma.04G186200 Glycine max HOM05D004617 ORTHO05D005531 1.1e-24 118.2 151 39.7
arahy.Tifrunner.gnm1.ann1.H09BLY Arachis hypogaea HOM05D004617 ORTHO05D005531 4.4e-21 106.3 150 40.7
Glyma.06G179933 Glycine max HOM05D004617 ORTHO05D005531 9.8e-21 105.1 148 39.2
Zm00001eb355840 Zea mays HOM05D004617 ORTHO05D005531 2.8e-20 103.6 206 34.0
Aqoxy5G01948 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 1.6e-18 97.8 164 36.0
BcaC07g39309 Brassica carinata HOM05D004617 ORTHO05D005531 4.5e-18 96.3 190 34.2
Mapoly0029s0121 Marchantia polymorpha HOM05D004617 ORTHO05D005531 9.4e-16 88.6 178 30.9
A06p19470 Brassica napus HOM05D004617 ORTHO05D005531 2.1e-15 87.4 242 29.8
Pp3c8_1270 Physcomitrium patens HOM05D004617 ORTHO05D005531 2.7e-15 87.0 175 33.1
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 4.7e-15 86.3 82 56.1
Pp3c3_37370 Physcomitrium patens HOM05D004617 ORTHO05D005531 1.0e-14 85.1 195 32.3
BraA06t25026Z Brassica rapa HOM05D004617 ORTHO05D005531 1.4e-14 84.7 234 29.9
C08p23230 Brassica napus HOM05D004617 ORTHO05D005531 3.4e-13 80.1 191 30.4
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 7.5e-13 79.0 107 36.4
Atru.chr9.2524 Acer truncatum HOM05D004617 ORTHO05D005531 6.3e-12 75.9 98 48.0
Glyma.17G086900 Glycine max HOM05D004617 ORTHO05D005531 1.1e-08 65.1 65 52.3
arahy.Tifrunner.gnm1.ann1.8UC028 Arachis hypogaea HOM05D004617 ORTHO05D005531 2.1e-07 60.8 99 41.4
PRCOL_00005442 Prasinoderma coloniale HOM05D004617 ORTHO05D005531 4.0e-06 56.6 219 26.9


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