Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400026859 Solanum tuberosum HOM05D007597 ORTHO05D009608 9.3e-85 317.0 180 100.0
Solyc03g006540.3 Solanum lycopersicum HOM05D007597 ORTHO05D009608 7.4e-74 280.8 182 90.7
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 3.9e-51 205.3 181 63.0
Sopen03g002540 Solanum pennellii HOM05D007597 ORTHO05D009608 1.6e-39 166.8 85 96.5
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 6.8e-35 151.4 92 79.3
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 8.8e-35 151.0 154 59.7
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 1.5e-34 150.2 91 81.3
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 2.6e-34 149.4 92 77.2
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 4.4e-34 148.7 156 55.1
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 5.7e-34 148.3 90 77.8
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 5.7e-34 148.3 128 66.4
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 5.7e-34 148.3 93 76.3
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 7.5e-34 147.9 115 64.3
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 9.8e-34 147.5 151 58.3
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 1.3e-33 147.1 92 76.1
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 1.7e-33 146.7 90 77.8
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 1.7e-33 146.7 92 75.0
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 8.3e-33 144.4 90 76.7
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 8.3e-33 144.4 90 76.7
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 1.8e-32 143.3 93 73.1
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 2.4e-32 142.9 89 75.3
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 4.1e-32 142.1 117 63.2
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 5.4e-32 141.7 93 74.2
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 5.4e-32 141.7 116 63.8
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 7.0e-32 141.4 154 53.2
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 7.0e-32 141.4 91 74.7
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 9.1e-32 141.0 88 78.4
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 1.2e-31 140.6 92 71.7
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 2.0e-31 139.8 162 47.5
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 2.0e-31 139.8 92 70.7
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.0e-31 139.8 92 70.7
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 2.0e-31 139.8 93 71.0
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 3.5e-31 139.0 92 70.7
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 4.5e-31 138.7 91 74.7
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 4.5e-31 138.7 89 75.3
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 4.5e-31 138.7 91 72.5
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 5.9e-31 138.3 119 61.3
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 1.3e-30 137.1 92 68.5
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 1.7e-30 136.7 90 71.1
CSS0009732 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 1.7e-30 136.7 89 75.3
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 2.9e-30 136.0 90 72.2
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 2.9e-30 136.0 91 69.2
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 3.8e-30 135.6 91 71.4
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 5.0e-30 135.2 109 64.2
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 6.5e-30 134.8 91 73.6
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 1.9e-29 133.3 153 48.4
Oeu031613.1 Olea europaea HOM05D007597 ORTHO05D009608 1.9e-29 133.3 87 71.3
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 1.9e-29 133.3 147 49.7
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 2.5e-29 132.9 93 64.5
Lj6P736T27 Lonicera japonica HOM05D007597 ORTHO05D009608 4.2e-29 132.1 87 72.4
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 4.2e-29 132.1 90 70.0
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 5.5e-29 131.7 93 69.9
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 7.2e-29 131.3 117 55.6
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 9.5e-29 131.0 91 68.1
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 1.2e-28 130.6 88 73.9
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 1.6e-28 130.2 93 63.4
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 2.8e-28 129.4 91 67.0
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 3.6e-28 129.0 148 49.3
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 3.6e-28 129.0 91 64.8
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 6.1e-28 128.3 92 68.5
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 6.1e-28 128.3 162 50.6
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 1.8e-27 126.7 90 63.3
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 3.0e-27 125.9 113 55.8
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 5.2e-27 125.2 91 67.0
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 6.8e-27 124.8 105 61.0
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 8.8e-27 124.4 149 48.3
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 8.8e-27 124.4 171 42.1
Migut.E00488 Erythranthe guttata HOM05D007597 ORTHO05D009608 1.5e-26 123.6 90 67.8
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 2.0e-26 123.2 148 45.9
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 3.4e-26 122.5 145 48.3
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 4.4e-26 122.1 145 48.3
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 4.4e-26 122.1 145 48.3
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 7.5e-26 121.3 95 62.1
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 1.3e-25 120.6 110 60.0
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 1.7e-25 120.2 145 46.9
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 1.7e-25 120.2 145 46.9
Carub.0005s0071 Capsella rubella HOM05D007597 ORTHO05D009608 2.2e-25 119.8 87 64.4
ATR0118G012 Amborella trichopoda HOM05D007597 ORTHO05D009608 3.7e-25 119.0 148 47.3
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 3.7e-25 119.0 111 52.3
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 1.4e-24 117.1 88 61.4
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 6.6e-22 108.2 90 55.6
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 3.6e-20 102.4 69 66.7
Os03g0713200 Oryza sativa ssp. japonica HOM05D007597 ORTHO05D009608 3.6e-20 102.4 90 55.6
Nitab4.5_0000241g0020 Nicotiana tabacum HOM05D007597 ORTHO05D009608 1.4e-19 100.5 125 67.2
Nitab4.5_0006778g0040 Nicotiana tabacum HOM05D007597 ORTHO05D009608 5.2e-19 98.6 119 63.9
AagrBONN_evm.TU.Sc2ySwM_228.3100 Anthoceros agrestis HOM05D007597 ORTHO05D009608 3.4e-18 95.9 87 49.4
Sed0011475 Sechium edule HOM05D007597 ORTHO05D009608 7.5e-18 94.7 67 71.6
CBR_g61471 Chara braunii HOM05D007597 ORTHO05D009608 6.4e-17 91.7 93 48.4
Pp3c16_25200 Physcomitrium patens HOM05D007597 ORTHO05D009608 6.6e-14 81.6 89 44.9
SMO115G0274 Selaginella moellendorffii HOM05D007597 ORTHO05D009608 1.3e-06 57.4 84 39.3


User provided reference genes

Program Settings