Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400026729 Solanum tuberosum HOM05D003774 ORTHO05D010174 4.7e-158 561.2 296 100.0
Solyc11g027830.2 Solanum lycopersicum HOM05D003774 ORTHO05D010174 6.3e-147 524.2 298 94.3
Sopen11g022590 Solanum pennellii HOM05D003774 ORTHO05D010174 1.7e-144 516.2 302 92.7
Nitab4.5_0005616g0030 Nicotiana tabacum HOM05D003774 ORTHO05D010174 9.2e-130 467.2 309 84.5
Nitab4.5_0001463g0060 Nicotiana tabacum HOM05D003774 ORTHO05D010174 2.7e-129 465.7 304 84.2
CAN.G1483.1 Capsicum annuum HOM05D003774 ORTHO05D010174 1.3e-128 463.4 307 83.7
Peaxi162Scf00688g00424 Petunia axillaris HOM05D003774 ORTHO05D010174 1.8e-122 443.0 306 79.7
Lsat_1_v5_gn_1_25800 Lactuca sativa HOM05D003774 ORTHO05D010174 4.9e-91 338.6 257 68.1
Cfa012970 Carpinus fangiana HOM05D003774 ORTHO05D010174 2.4e-90 336.3 258 68.6
FAN08G2588 Fragaria x ananassa HOM05D003774 ORTHO05D010174 1.6e-89 333.6 293 63.5
FvH4_5g31600 Fragaria vesca HOM05D003774 ORTHO05D010174 3.5e-89 332.4 293 63.8
Eucgr.F02989 Eucalyptus grandis HOM05D003774 ORTHO05D010174 4.6e-89 332.0 293 62.5
RcHm_v2.0_Chr7g0227131 Rosa chinensis HOM05D003774 ORTHO05D010174 4.6e-89 332.0 291 62.9
CANSAT25G1591 Cannabis sativa HOM05D003774 ORTHO05D010174 1.3e-88 330.5 257 66.5
MD14G1036300 Malus domestica HOM05D003774 ORTHO05D010174 1.3e-88 330.5 267 67.8
Migut.C01324 Erythranthe guttata HOM05D003774 ORTHO05D010174 5.1e-88 328.6 299 61.5
PGR042G3332 Punica granatum HOM05D003774 ORTHO05D010174 5.1e-88 328.6 253 68.4
CiPaw.07G235600 Carya illinoinensis HOM05D003774 ORTHO05D010174 6.6e-88 328.2 254 65.4
Cc00_g20990 Coffea canephora HOM05D003774 ORTHO05D010174 8.7e-88 327.8 278 65.1
FAN07G1602 Fragaria x ananassa HOM05D003774 ORTHO05D010174 1.5e-87 327.0 293 62.8
HanXRQChr02g0036571 Helianthus annuus HOM05D003774 ORTHO05D010174 2.5e-87 326.2 259 66.0
Manes.18G106000 Manihot esculenta HOM05D003774 ORTHO05D010174 9.6e-87 324.3 246 67.5
Prupe.1G555700 Prunus persica HOM05D003774 ORTHO05D010174 1.1e-85 320.9 264 65.2
Thecc.08G192700 Theobroma cacao HOM05D003774 ORTHO05D010174 3.1e-85 319.3 257 66.1
DCAR_017444 Daucus carota HOM05D003774 ORTHO05D010174 2.0e-84 316.6 241 67.6
TWI14G1031 Tripterygium wilfordii HOM05D003774 ORTHO05D010174 3.4e-84 315.8 230 71.3
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 7.6e-84 314.7 269 63.2
Sp1g30100 Schrenkiella parvula HOM05D003774 ORTHO05D010174 1.7e-83 313.5 257 62.3
AL1G50100 Arabidopsis lyrata HOM05D003774 ORTHO05D010174 2.9e-83 312.8 293 57.3
A09p31890 Brassica napus HOM05D003774 ORTHO05D010174 2.9e-83 312.8 257 61.9
Actinidia29409 Actinidia chinensis HOM05D003774 ORTHO05D010174 3.8e-83 312.4 276 62.0
BcaC08g43723 Brassica carinata HOM05D003774 ORTHO05D010174 4.9e-83 312.0 257 61.9
BolC6t36225H Brassica oleracea HOM05D003774 ORTHO05D010174 4.9e-83 312.0 257 61.9
C06p11060 Brassica napus HOM05D003774 ORTHO05D010174 6.4e-83 311.6 274 59.9
BraA09t38729Z Brassica rapa HOM05D003774 ORTHO05D010174 6.4e-83 311.6 257 61.9
BcaB07g33098 Brassica carinata HOM05D003774 ORTHO05D010174 1.2e-81 307.4 257 61.9
Carub.0347s0001 Capsella rubella HOM05D003774 ORTHO05D010174 6.0e-81 305.1 293 57.3
Thhalv10001819m.g Eutrema salsugineum HOM05D003774 ORTHO05D010174 1.0e-80 304.3 257 61.9
THA.LOC104816539 Tarenaya hassleriana HOM05D003774 ORTHO05D010174 1.3e-80 303.9 255 62.4
Atru.chr13.2372 Acer truncatum HOM05D003774 ORTHO05D010174 3.0e-80 302.8 258 62.4
Ciclev10003535m.g Citrus clementina HOM05D003774 ORTHO05D010174 3.0e-80 302.8 246 64.2
PSO170G3079 Papaver somniferum HOM05D003774 ORTHO05D010174 1.9e-79 300.1 270 60.7
Haze_21314 Corylus avellana HOM05D003774 ORTHO05D010174 9.6e-79 297.7 262 62.6
CsaV3_5G040540 Cucumis sativus L. HOM05D003774 ORTHO05D010174 9.6e-79 297.7 276 57.6
PSO782G0406 Papaver somniferum HOM05D003774 ORTHO05D010174 2.1e-78 296.6 264 61.4
MBI03_g45112_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 4.5e-76 288.9 282 59.6
GSVIVG01026088001 Vitis vinifera HOM05D003774 ORTHO05D010174 4.2e-74 282.3 256 60.5
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 2.7e-73 279.6 297 55.9
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 1.1e-71 274.2 209 66.0
Oeu013897.1 Olea europaea HOM05D003774 ORTHO05D010174 1.1e-69 267.7 208 67.3
MD04G1056900 Malus domestica HOM05D003774 ORTHO05D010174 6.9e-69 265.0 206 67.5
Potri.013G105500 Populus trichocarpa HOM05D003774 ORTHO05D010174 2.0e-68 263.5 204 67.2
ClCG08G000190 Citrullus lanatus HOM05D003774 ORTHO05D010174 2.6e-68 263.1 272 54.8
Cpa.g.sc66.3 Carica papaya HOM05D003774 ORTHO05D010174 3.8e-67 259.2 204 66.2
MBI03_g46804_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 4.2e-66 255.8 244 60.2
AT1G35340 Arabidopsis thaliana HOM05D003774 ORTHO05D010174 1.0e-64 251.1 208 60.1
COL.COLO4_24648 Corchorus olitorius HOM05D003774 ORTHO05D010174 6.7e-64 248.4 230 58.7
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 1.0e-59 234.6 223 58.3
SEGI_18058 Sequoiadendron giganteum HOM05D003774 ORTHO05D010174 5.0e-59 232.3 241 52.7
Zm00001eb169160 Zea mays HOM05D003774 ORTHO05D010174 1.1e-58 231.1 243 52.7
Dinv41759 Davidia involucrata HOM05D003774 ORTHO05D010174 2.8e-54 216.5 165 67.9
Pp3c18_9200 Physcomitrium patens HOM05D003774 ORTHO05D010174 1.0e-48 198.0 245 44.5
Mapoly0085s0045 Marchantia polymorpha HOM05D003774 ORTHO05D010174 5.3e-45 185.7 260 40.4
MELO3C022227.2 Cucumis melo HOM05D003774 ORTHO05D010174 1.3e-43 181.0 276 42.0
Rhsim11G0052800 Rhododendron simsii HOM05D003774 ORTHO05D000166 3.7e-38 162.9 125 68.8
CARHR034170 Cardamine hirsuta HOM05D003774 ORTHO05D010174 6.5e-35 152.1 145 60.0
TAR628G1250 Trochodendron aralioides HOM05D003774 ORTHO05D010174 9.4e-34 148.3 101 76.2
MSTRG.1569 Avicennia marina HOM05D003774 ORTHO05D010174 3.3e-31 139.8 125 62.4
Lj7A284G37 Lonicera japonica HOM05D003774 ORTHO05D010174 4.4e-31 139.4 90 75.6
AagrBONN_evm.TU.Sc2ySwM_340.403 Anthoceros agrestis HOM05D000737 ORTHO05D000581 1.9e-26 124.0 242 34.3
Lj7A284T38 Lonicera japonica HOM05D003774 ORTHO05D010174 4.0e-24 116.3 101 62.4
FvH4_5g26640 Fragaria vesca HOM05D003774 ORTHO05D010174 2.0e-23 114.0 130 54.6
Os11g0219000 Oryza sativa ssp. japonica HOM05D003774 ORTHO05D010174 4.2e-18 96.3 108 51.9
CAN.G271.1 Capsicum annuum HOM05D003774 ORTHO05D010174 1.2e-15 88.2 129 46.5
MD15G1405700 Malus domestica HOM05D003774 ORTHO05D010174 4.1e-13 79.7 148 35.8
Cre16.g670500 Chlamydomonas reinhardtii HOM05D003774 ORTHO05D010174 1.9e-10 70.9 335 24.2
MCO03G373 Micromonas commoda HOM05D003774 ORTHO05D010174 2.1e-09 67.4 113 33.6
MBI03_g48045_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 4.9e-06 56.2 50 58.0


User provided reference genes

Program Settings