Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400026601 Solanum tuberosum HOM05D003201 ORTHO05D008805 1.5e-86 322.8 156 100.0
Sopen01g022430 Solanum pennellii HOM05D003201 ORTHO05D008805 3.5e-80 301.6 156 92.9
Solyc01g057570.3 Solanum lycopersicum HOM05D003201 ORTHO05D008805 4.3e-78 294.7 156 91.7
Sopen01g019970 Solanum pennellii HOM05D003201 ORTHO05D008805 1.2e-75 286.6 156 89.7
CAN.G431.2 Capsicum annuum HOM05D003201 ORTHO05D008805 4.1e-73 278.1 156 87.8
Peaxi162Scf01181g00210 Petunia axillaris HOM05D003201 ORTHO05D008805 3.2e-65 251.9 155 79.4
Nitab4.5_0000075g0050 Nicotiana tabacum HOM05D003201 ORTHO05D008805 4.8e-61 238.0 146 82.2
Dinv15525 Davidia involucrata HOM05D003201 ORTHO05D008805 1.1e-41 173.7 161 57.1
Actinidia16221 Actinidia chinensis HOM05D003201 ORTHO05D008805 2.3e-39 166.0 161 55.9
Lalb_Chr01g0008671 Lupinus albus HOM05D003201 ORTHO05D008805 2.5e-38 162.5 162 53.7
GSVIVG01034815001 Vitis vinifera HOM05D003201 ORTHO05D008805 2.5e-38 162.5 161 54.7
vmacro04280 Vaccinium macrocarpon HOM05D003201 ORTHO05D008805 3.3e-38 162.2 161 55.3
Medtr6g059320 Medicago truncatula HOM05D003201 ORTHO05D008805 9.7e-38 160.6 161 53.4
Psat1g112800 Pisum sativum HOM05D003201 ORTHO05D008805 2.2e-37 159.5 164 54.9
Haze_24508 Corylus avellana HOM05D003201 ORTHO05D008805 2.8e-37 159.1 161 53.4
Cpa.g.sc30.50 Carica papaya HOM05D003201 ORTHO05D008805 3.7e-37 158.7 156 50.6
TPR.G5800 Trifolium pratense HOM05D003201 ORTHO05D008805 4.8e-37 158.3 161 54.0
Ca_25246_v3 Cicer arietinum L. HOM05D003201 ORTHO05D008805 6.3e-37 157.9 160 53.8
TWI34G1882 Tripterygium wilfordii HOM05D003201 ORTHO05D008805 8.2e-37 157.5 156 53.2
CSS0031904 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008805 1.8e-36 156.4 161 55.3
CiPaw.03G255400 Carya illinoinensis HOM05D003201 ORTHO05D008805 2.4e-36 156.0 161 54.7
Manes.18G121700 Manihot esculenta HOM05D003201 ORTHO05D008805 2.4e-36 156.0 162 53.7
Gohir.D09G114700 Gossypium hirsutum HOM05D003201 ORTHO05D008805 4.1e-36 155.2 156 53.8
TAR623G0449 Trochodendron aralioides HOM05D003201 ORTHO05D008805 4.1e-36 155.2 160 52.5
Migut.N00525 Erythranthe guttata HOM05D003201 ORTHO05D008805 5.3e-36 154.8 154 55.8
Gohir.A09G117900 Gossypium hirsutum HOM05D003201 ORTHO05D008805 5.3e-36 154.8 156 53.8
Thecc.05G124600 Theobroma cacao HOM05D003201 ORTHO05D008805 5.3e-36 154.8 157 54.1
Glyma.16G207100 Glycine max HOM05D003201 ORTHO05D008805 1.2e-35 153.7 167 50.9
Phvul.004G131600 Phaseolus vulgaris HOM05D003201 ORTHO05D008805 1.2e-35 153.7 164 51.2
Cfa002302 Carpinus fangiana HOM05D003201 ORTHO05D008805 1.5e-35 153.3 162 53.7
Lj2g0011105 Lotus japonicus HOM05D003201 ORTHO05D008805 2.0e-35 152.9 161 51.6
MSTRG.12815 Avicennia marina HOM05D003201 ORTHO05D008805 7.7e-35 151.0 156 55.1
Prupe.6G000300 Prunus persica HOM05D003201 ORTHO05D008805 7.7e-35 151.0 161 50.3
VMungo0464G1483 Vigna mungo HOM05D003201 ORTHO05D008805 1.0e-34 150.6 164 50.6
MBI13_g39202_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 2.2e-34 149.4 167 49.1
Cc01_g05060 Coffea canephora HOM05D003201 ORTHO05D008805 3.8e-34 148.7 162 48.8
Hma1.2p1_1133F.1_g260360 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 3.8e-34 148.7 162 53.1
Hma1.2p1_1133F.1_g260370 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 3.8e-34 148.7 162 53.1
SGA_v2.0_scaffold6G03334 Striga asiatica HOM05D003201 ORTHO05D008805 3.8e-34 148.7 150 54.7
Glyma.09G156400 Glycine max HOM05D003201 ORTHO05D008805 5.0e-34 148.3 167 51.5
Eucgr.J01718 Eucalyptus grandis HOM05D003201 ORTHO05D008805 6.5e-34 147.9 168 50.6
Potri.013G161600 Populus trichocarpa HOM05D003201 ORTHO05D008805 6.5e-34 147.9 162 52.5
QL04p043008 Quercus lobata HOM05D003201 ORTHO05D008805 8.5e-34 147.5 161 54.0
ECA248G3933 Erigeron canadensis HOM05D003201 ORTHO05D008805 1.9e-33 146.4 155 52.9
Lj1A555G38 Lonicera japonica HOM05D003201 ORTHO05D008805 1.9e-33 146.4 172 49.4
MD11G1000200 Malus domestica HOM05D003201 ORTHO05D008805 5.5e-33 144.8 162 50.0
THA.LOC104806236 Tarenaya hassleriana HOM05D003201 ORTHO05D008805 5.5e-33 144.8 156 49.4
RcHm_v2.0_Chr5g0084171 Rosa chinensis HOM05D003201 ORTHO05D008805 9.4e-33 144.1 161 50.9
PGR119G1272 Punica granatum HOM05D003201 ORTHO05D008805 1.2e-32 143.7 167 51.5
DCAR_028397 Daucus carota HOM05D003201 ORTHO05D008805 2.1e-32 142.9 159 50.9
HanXRQChr17g0555621 Helianthus annuus HOM05D003201 ORTHO05D008805 2.7e-32 142.5 156 53.2
FAN11G2508 Fragaria x ananassa HOM05D003201 ORTHO05D008805 3.6e-32 142.1 161 50.3
CANSAT35G1729 Cannabis sativa HOM05D003201 ORTHO05D008805 4.6e-32 141.7 156 52.6
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 7.9e-32 141.0 156 51.3
CDE02G2127 Ceratophyllum demersum HOM05D003201 ORTHO05D008805 1.0e-31 140.6 166 45.2
CsaV3_6G041170 Cucumis sativus L. HOM05D003201 ORTHO05D008805 1.8e-31 139.8 155 52.3
FvH4_3g46100 Fragaria vesca HOM05D003201 ORTHO05D008805 3.0e-31 139.0 161 49.7
MELO3C024592.2 Cucumis melo HOM05D003201 ORTHO05D008805 3.9e-31 138.7 154 51.3
Sabra13G0129200 Salix brachista HOM05D003201 ORTHO05D008805 6.7e-31 137.9 162 50.6
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 8.8e-31 137.5 156 50.6
Thhalv10026088m.g Eutrema salsugineum HOM05D003201 ORTHO05D008805 1.1e-30 137.1 157 49.0
Aqoxy5G03624 Aquilegia oxysepala HOM05D003201 ORTHO05D008805 3.3e-30 135.6 160 48.1
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 4.3e-30 135.2 156 49.4
Nitab4.5_0005125g0010 Nicotiana tabacum HOM05D003201 ORTHO05D008805 5.7e-30 134.8 87 77.0
Sp7g18690 Schrenkiella parvula HOM05D003201 ORTHO05D008805 1.7e-29 133.3 157 47.1
ClCG01G015060 Citrullus lanatus HOM05D003201 ORTHO05D008805 2.2e-29 132.9 155 49.0
FAN21G2623 Fragaria x ananassa HOM05D003201 ORTHO05D008805 2.2e-29 132.9 161 48.4
PSO339G6265 Papaver somniferum HOM05D003201 ORTHO05D008805 3.7e-29 132.1 162 46.9
Sed0008662 Sechium edule HOM05D003201 ORTHO05D008805 3.7e-29 132.1 155 49.0
AUR62000916 Chenopodium quinoa HOM05D003201 ORTHO05D008805 6.3e-29 131.3 160 46.9
CARHR227170 Cardamine hirsuta HOM05D003201 ORTHO05D008805 1.1e-28 130.6 156 48.7
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 1.8e-28 129.8 158 46.8
PSO384G0221 Papaver somniferum HOM05D003201 ORTHO05D008805 2.4e-28 129.4 169 46.7
COL.COLO4_24749 Corchorus olitorius HOM05D003201 ORTHO05D008805 3.1e-28 129.0 157 45.9
Carub.0007s2082 Capsella rubella HOM05D003201 ORTHO05D008805 6.9e-28 127.9 156 46.2
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 1.2e-27 127.1 157 47.1
FAN25G0659 Fragaria x ananassa HOM05D003201 ORTHO05D008805 1.2e-27 127.1 153 49.7
AUR62005054 Chenopodium quinoa HOM05D003201 ORTHO05D008805 1.5e-27 126.7 154 48.1
MBI13_g36948_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 2.6e-27 125.9 148 48.0
Hund07019 Selenicereus undatus HOM05D003201 ORTHO05D008805 3.4e-27 125.6 160 46.2
AT4G20350 Arabidopsis thaliana HOM05D003201 ORTHO05D008805 4.5e-27 125.2 156 47.4
Rhsim13G0235500 Rhododendron simsii HOM05D003201 ORTHO05D008805 4.5e-27 125.2 126 53.2
AL7G33540 Arabidopsis lyrata HOM05D003201 ORTHO05D008805 2.2e-26 122.9 156 46.8
Zm00001eb047810 Zea mays HOM05D003201 ORTHO05D008805 6.5e-26 121.3 169 43.2
SalBow3G4219 Salvia bowleyana HOM05D003201 ORTHO05D008805 8.5e-26 120.9 97 63.9
arahy.Tifrunner.gnm1.ann1.75P5EB Arachis hypogaea HOM05D003201 ORTHO05D008805 1.4e-25 120.2 114 57.9
Duzib093G2193 Durio zibethinus HOM05D003201 ORTHO05D008805 3.2e-25 119.0 144 48.6
unitig_0.g1143 Utricularia gibba HOM05D003201 ORTHO05D008805 4.2e-25 118.6 156 47.4
HPP92_021155 Vanilla planifolia HOM05D003201 ORTHO05D008805 5.5e-25 118.2 160 43.8
arahy.Tifrunner.gnm1.ann1.F1EX5J Arachis hypogaea HOM05D003201 ORTHO05D008805 2.1e-24 116.3 115 54.8
Lsat_1_v5_gn_1_71340 Lactuca sativa HOM05D003201 ORTHO05D008805 2.7e-24 115.9 112 56.2
ATR0068G091 Amborella trichopoda HOM05D003201 ORTHO05D008805 1.8e-23 113.2 159 42.1
Atru.chr2.209 Acer truncatum HOM05D003201 ORTHO05D008805 5.1e-23 111.7 85 62.4
EL10Ac4g09260 Beta vulgaris HOM05D003201 ORTHO05D008805 5.1e-23 111.7 200 38.5
Sc18g0002730 Simmondsia chinensis HOM05D003201 ORTHO05D008805 2.0e-22 109.8 94 60.6
Gorai.006G132500 Gossypium raimondii HOM05D003201 ORTHO05D008805 9.7e-22 107.5 88 62.5
BcaC09g51346 Brassica carinata HOM05D003201 ORTHO05D008805 1.3e-21 107.1 119 50.4
SEGI_31075 Sequoiadendron giganteum HOM05D003201 ORTHO05D008805 1.7e-21 106.7 176 40.9
Ciclev10029320m.g Citrus clementina HOM05D003201 ORTHO05D008805 3.7e-21 105.5 85 62.4
Pp3c2_18510 Physcomitrium patens HOM05D003201 ORTHO05D008805 1.2e-19 100.5 165 37.0
Mapoly0007s0017 Marchantia polymorpha HOM05D003201 ORTHO05D008805 1.1e-17 94.0 160 38.1
Os10g0420000 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008805 2.1e-16 89.7 163 38.7
SMO147G0005 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 2.3e-15 86.3 158 37.3
SMO132G0004 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 4.1e-12 75.5 173 33.5
MCO03G055 Micromonas commoda HOM05D003201 ORTHO05D008805 3.5e-11 72.4 150 35.3
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 2.5e-09 66.2 148 33.1
AUR62004843 Chenopodium quinoa HOM05D003201 ORTHO05D008805 3.3e-06 55.8 50 54.0
CBR_g45547 Chara braunii HOM05D003201 ORTHO05D008805 5.7e-06 55.1 263 24.7


User provided reference genes

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