Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400026521 Solanum tuberosum HOM05D013289 ORTHO05D017128 1.5e-123 446.4 262 100.0
PGSC0003DMG400014996 Solanum tuberosum HOM05D013289 ORTHO05D017128 1.6e-64 250.4 165 92.7
PGSC0003DMG400027608 Solanum tuberosum HOM05D013289 ORTHO05D017128 3.1e-57 226.1 219 69.9
PGSC0003DMG400036521 Solanum tuberosum HOM05D013289 ORTHO05D017128 1.2e-53 214.2 191 64.9
Solyc07g018320.3 Solanum lycopersicum HOM05D013289 ORTHO05D017128 2.0e-43 180.3 194 56.7
PGSC0003DMG400011625 Solanum tuberosum HOM05D013289 ORTHO05D017128 3.6e-29 132.9 106 88.7
PGSC0003DMG400009022 Solanum tuberosum HOM05D013289 ORTHO05D017128 6.2e-29 132.1 104 90.4
Sopen11g018390 Solanum pennellii HOM05D013289 ORTHO05D017128 8.6e-23 111.7 100 84.0
Solyc02g020970.1 Solanum lycopersicum HOM05D013289 ORTHO05D017128 1.9e-22 110.5 106 72.6
PGSC0003DMG400044307 Solanum tuberosum HOM05D013289 ORTHO05D000137 6.8e-20 102.1 75 76.0
PGSC0003DMG400000400 Solanum tuberosum HOM05D013289 ORTHO05D394994 4.6e-16 89.4 165 39.4
Sopen08g012730 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-13 80.5 48 79.2
CAN.G1181.29 Capsicum annuum HOM05D000541 ORTHO05D000137 8.1e-13 78.6 115 34.8
CAN.G498.5 Capsicum annuum HOM05D000541 ORTHO05D000137 8.1e-13 78.6 121 36.4
PGSC0003DMG400004096 Solanum tuberosum HOM05D007732 ORTHO05D010105 1.1e-12 78.2 109 33.0
CAN.G101.24 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-12 77.8 174 29.9
PGSC0003DMG400021078 Solanum tuberosum HOM05D007732 ORTHO05D010105 9.0e-12 75.1 99 34.3
CAN.G1079.1 Capsicum annuum HOM05D000541 ORTHO05D000137 1.5e-11 74.3 100 35.0
CAN.G176.17 Capsicum annuum HOM05D000541 ORTHO05D000137 1.5e-11 74.3 116 34.5
CAN.G279.30 Capsicum annuum HOM05D000541 ORTHO05D000137 1.5e-11 74.3 99 39.4
PGSC0003DMG400017393 Solanum tuberosum HOM05D007732 ORTHO05D010105 1.5e-11 74.3 109 33.9
CAN.G168.30 Capsicum annuum HOM05D000541 ORTHO05D000137 2.0e-11 73.9 117 33.3
Sopen02g004770 Solanum pennellii HOM05D013289 ORTHO05D017128 2.0e-11 73.9 106 60.4
CAN.G786.22 Capsicum annuum HOM05D000541 ORTHO05D000137 3.4e-11 73.2 106 34.0
CAN.G606.27 Capsicum annuum HOM05D000541 ORTHO05D000137 4.4e-11 72.8 115 32.2
CAN.G27.51 Capsicum annuum HOM05D000541 ORTHO05D000137 7.6e-11 72.0 115 31.3
CAN.G311.37 Capsicum annuum HOM05D000541 ORTHO05D000137 7.6e-11 72.0 101 35.6
CAN.G731.2 Capsicum annuum HOM05D000541 ORTHO05D000137 7.6e-11 72.0 115 32.2
PGSC0003DMG400035070 Solanum tuberosum HOM05D007732 ORTHO05D010105 7.6e-11 72.0 110 32.7
CAN.G1103.2 Capsicum annuum HOM05D000541 ORTHO05D000137 1.3e-10 71.2 115 33.0
CAN.G320.8 Capsicum annuum HOM05D000541 ORTHO05D000137 2.9e-10 70.1 123 35.0
CAN.G321.7 Capsicum annuum HOM05D000541 ORTHO05D000137 2.9e-10 70.1 99 35.4
CAN.G744.11 Capsicum annuum HOM05D000541 ORTHO05D000137 2.9e-10 70.1 99 33.3
CAN.G267.7 Capsicum annuum HOM05D000541 ORTHO05D000137 6.4e-10 68.9 130 30.0
CAN.G1491.6 Capsicum annuum HOM05D000541 ORTHO05D000137 8.4e-10 68.6 80 38.8
CAN.G673.9 Capsicum annuum HOM05D000541 ORTHO05D000137 1.1e-09 68.2 98 34.7
CAN.G407.73 Capsicum annuum HOM05D000541 ORTHO05D000137 1.9e-09 67.4 138 30.4
PGSC0003DMG400024411 Solanum tuberosum HOM05D007732 ORTHO05D010105 3.2e-09 66.6 105 36.2
Sopen11g025370 Solanum pennellii HOM05D000541 ORTHO05D000137 4.2e-09 66.2 135 32.6
Sopen11g020290 Solanum pennellii HOM05D007732 ORTHO05D010105 5.4e-09 65.9 102 34.3
CAN.G1175.14 Capsicum annuum HOM05D000541 ORTHO05D000137 7.1e-09 65.5 124 31.5
CAN.G1597.3 Capsicum annuum HOM05D000541 ORTHO05D000137 7.1e-09 65.5 65 41.5
CAN.G312.2 Capsicum annuum HOM05D000541 ORTHO05D000137 7.1e-09 65.5 105 33.3
CAN.G152.14 Capsicum annuum HOM05D000541 ORTHO05D000137 1.6e-08 64.3 130 30.0
CAN.G18.5 Capsicum annuum HOM05D000541 ORTHO05D000137 1.6e-08 64.3 115 32.2
CAN.G587.42 Capsicum annuum HOM05D000541 ORTHO05D000137 2.7e-08 63.5 79 35.4
CAN.G1422.9 Capsicum annuum HOM05D000541 ORTHO05D000137 3.5e-08 63.2 117 27.4
PGSC0003DMG400002289 Solanum tuberosum HOM05D007732 ORTHO05D010105 3.5e-08 63.2 100 34.0
Sopen04g012070 Solanum pennellii HOM05D007732 ORTHO05D010105 6.0e-08 62.4 110 35.5
Sopen03g017640 Solanum pennellii HOM05D007732 ORTHO05D010105 7.8e-08 62.0 124 29.8
Sopen05g010040 Solanum pennellii HOM05D007732 ORTHO05D010105 7.8e-08 62.0 100 35.0
CAN.G567.26 Capsicum annuum HOM05D000541 ORTHO05D000137 2.3e-07 60.5 101 31.7
Sopen09g013580 Solanum pennellii HOM05D007732 ORTHO05D010105 8.7e-07 58.5 102 30.4
CAN.G803.33 Capsicum annuum HOM05D000541 ORTHO05D000137 7.3e-06 55.5 100 28.0


User provided reference genes

Program Settings