Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400026478 Solanum tuberosum HOM05D006461 ORTHO05D008199 2.0e-83 312.4 161 100.0
Sopen03g028120 Solanum pennellii HOM05D006461 ORTHO05D008199 2.0e-78 295.8 161 94.4
Solyc03g097360.3 Solanum lycopersicum HOM05D006461 ORTHO05D008199 2.2e-77 292.4 161 93.8
Peaxi162Scf00516g00428 Petunia axillaris HOM05D006461 ORTHO05D008199 6.4e-69 264.2 157 86.0
Nitab4.5_0005545g0020 Nicotiana tabacum HOM05D006461 ORTHO05D008199 1.3e-66 256.5 156 85.3
Nitab4.5_0000021g0870 Nicotiana tabacum HOM05D006461 ORTHO05D008199 1.7e-66 256.1 156 84.6
CAN.G732.29 Capsicum annuum HOM05D006461 ORTHO05D008199 2.5e-65 252.3 163 85.3
SalBow2G0694 Salvia bowleyana HOM05D006461 ORTHO05D008199 1.4e-39 166.8 162 60.5
Cfa016120 Carpinus fangiana HOM05D006461 ORTHO05D008199 3.1e-39 165.6 111 81.1
TAR375G0815 Trochodendron aralioides HOM05D006461 ORTHO05D008199 3.1e-39 165.6 169 60.4
Manes.08G158500 Manihot esculenta HOM05D006461 ORTHO05D008199 5.3e-39 164.9 115 75.7
Nn3g19117 Nelumbo nucifera HOM05D006461 ORTHO05D008199 6.9e-39 164.5 164 57.3
Atru.chr2.1733 Acer truncatum HOM05D006461 ORTHO05D008199 9.0e-39 164.1 169 58.0
Cc02_g00020 Coffea canephora HOM05D006461 ORTHO05D008199 4.5e-38 161.8 159 59.1
Actinidia08786 Actinidia chinensis HOM05D006461 ORTHO05D008199 1.3e-37 160.2 169 55.6
Gohir.D13G163800 Gossypium hirsutum HOM05D006461 ORTHO05D008199 1.3e-37 160.2 102 79.4
Gorai.013G199400 Gossypium raimondii HOM05D006461 ORTHO05D008199 2.2e-37 159.5 102 79.4
PSO063G2738 Papaver somniferum HOM05D006461 ORTHO05D008199 2.9e-37 159.1 101 80.2
DCAR_020437 Daucus carota HOM05D006461 ORTHO05D008199 4.9e-37 158.3 160 56.2
Hma1.2p1_0074F.1_g039100 Hydrangea macrophylla HOM05D006461 ORTHO05D008199 4.9e-37 158.3 167 58.7
Prupe.1G398900 Prunus persica HOM05D006461 ORTHO05D008199 4.9e-37 158.3 110 73.6
arahy.Tifrunner.gnm1.ann1.8SK5FU Arachis hypogaea HOM05D006461 ORTHO05D008199 6.5e-37 157.9 101 79.2
arahy.Tifrunner.gnm1.ann1.W7YZT9 Arachis hypogaea HOM05D006461 ORTHO05D008199 6.5e-37 157.9 101 79.2
Duzib106G1824 Durio zibethinus HOM05D006461 ORTHO05D008199 6.5e-37 157.9 100 78.0
Lsat_1_v5_gn_9_48000 Lactuca sativa HOM05D006461 ORTHO05D008199 6.5e-37 157.9 166 54.8
Thecc.05G228900 Theobroma cacao HOM05D006461 ORTHO05D008199 8.4e-37 157.5 103 77.7
Dinv19309 Davidia involucrata HOM05D006461 ORTHO05D008199 1.1e-36 157.1 167 54.5
Aqoxy3G01574 Aquilegia oxysepala HOM05D006461 ORTHO05D008199 1.9e-36 156.4 131 66.4
SGA_v2.0_scaffold51G18860 Striga asiatica HOM05D006461 ORTHO05D008199 1.9e-36 156.4 158 55.7
unitig_62.g23822 Utricularia gibba HOM05D006461 ORTHO05D008199 1.9e-36 156.4 105 77.1
Gohir.A13G158700 Gossypium hirsutum HOM05D006461 ORTHO05D008199 3.2e-36 155.6 102 76.5
Sed0021956 Sechium edule HOM05D006461 ORTHO05D008199 3.2e-36 155.6 105 74.3
ClCG01G005420 Citrullus lanatus HOM05D006461 ORTHO05D008199 4.2e-36 155.2 98 80.6
QL09p005902 Quercus lobata HOM05D006461 ORTHO05D008199 4.2e-36 155.2 179 54.2
Lj6g0024347 Lotus japonicus HOM05D006461 ORTHO05D008199 5.5e-36 154.8 97 80.4
ECA232G1267 Erigeron canadensis HOM05D006461 ORTHO05D008199 7.1e-36 154.5 170 52.9
MELO3C005387.2 Cucumis melo HOM05D006461 ORTHO05D008199 1.2e-35 153.7 98 79.6
CsaV3_5G005660 Cucumis sativus L. HOM05D006461 ORTHO05D008199 1.2e-35 153.7 98 79.6
Manes.09G131300 Manihot esculenta HOM05D006461 ORTHO05D008199 1.6e-35 153.3 104 76.0
Migut.F00927 Erythranthe guttata HOM05D006461 ORTHO05D008199 2.1e-35 152.9 152 61.8
Rhsim03G0225700 Rhododendron simsii HOM05D006461 ORTHO05D008199 2.1e-35 152.9 173 54.9
Medtr1g040145 Medicago truncatula HOM05D006461 ORTHO05D008199 2.7e-35 152.5 101 76.2
Potri.013G074100 Populus trichocarpa HOM05D006461 ORTHO05D008199 7.9e-35 151.0 104 76.0
RcHm_v2.0_Chr4g0406641 Rosa chinensis HOM05D006461 ORTHO05D008199 7.9e-35 151.0 170 54.7
Ca_26296_v3 Cicer arietinum L. HOM05D006461 ORTHO05D008199 1.0e-34 150.6 98 77.6
FvH4_4g10840 Fragaria vesca HOM05D006461 ORTHO05D008199 2.3e-34 149.4 105 73.3
FAN12G0004 Fragaria x ananassa HOM05D006461 ORTHO05D008199 2.3e-34 149.4 101 75.2
FAN17G2347 Fragaria x ananassa HOM05D006461 ORTHO05D008199 2.3e-34 149.4 101 75.2
Ciclev10032825m.g Citrus clementina HOM05D006461 ORTHO05D008199 3.0e-34 149.1 103 76.7
Glyma.02G000900 Glycine max HOM05D006461 ORTHO05D008199 3.0e-34 149.1 98 77.6
Psat6g101920 Pisum sativum HOM05D006461 ORTHO05D008199 3.0e-34 149.1 97 77.3
MSTRG.8560 Avicennia marina HOM05D006461 ORTHO05D008199 3.9e-34 148.7 163 55.8
CiPaw.06G037900 Carya illinoinensis HOM05D006461 ORTHO05D008199 3.9e-34 148.7 101 78.2
CDE12G0687 Ceratophyllum demersum HOM05D006461 ORTHO05D008199 5.1e-34 148.3 106 73.6
Cc11_g04930 Coffea canephora HOM05D006461 ORTHO05D008199 5.1e-34 148.3 159 54.7
CiPaw.05G210400 Carya illinoinensis HOM05D006461 ORTHO05D008199 8.7e-34 147.5 103 75.7
TPR.G30220 Trifolium pratense HOM05D006461 ORTHO05D008199 1.9e-33 146.4 97 77.3
VMungo0720G0947 Vigna mungo HOM05D006461 ORTHO05D008199 2.5e-33 146.0 98 75.5
MD15G1045100 Malus domestica HOM05D006461 ORTHO05D008199 3.3e-33 145.6 167 51.5
PGR119G0757 Punica granatum HOM05D006461 ORTHO05D008199 3.3e-33 145.6 98 76.5
TWI32G0808 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 4.3e-33 145.2 102 71.6
CANSAT54G2891 Cannabis sativa HOM05D006461 ORTHO05D008199 7.4e-33 144.4 120 65.0
SEGI_06006 Sequoiadendron giganteum HOM05D006461 ORTHO05D008199 7.4e-33 144.4 157 53.5
Sc03g0004610 Simmondsia chinensis HOM05D006461 ORTHO05D008199 7.4e-33 144.4 125 66.4
MD08G1049500 Malus domestica HOM05D006461 ORTHO05D008199 9.7e-33 144.1 165 54.5
HanXRQChr05g0140271 Helianthus annuus HOM05D006461 ORTHO05D008199 1.3e-32 143.7 100 75.0
Mapoly0098s0024 Marchantia polymorpha HOM05D006461 ORTHO05D008199 1.3e-32 143.7 94 76.6
Ah.08g222190 Amaranthus hybridus HOM05D006461 ORTHO05D008199 2.8e-32 142.5 85 81.2
Phvul.007G281100 Phaseolus vulgaris HOM05D006461 ORTHO05D008199 1.1e-31 140.6 97 73.2
GSVIVG01024255001 Vitis vinifera HOM05D006461 ORTHO05D008199 1.4e-31 140.2 81 87.7
A10p21840 Brassica napus HOM05D006461 ORTHO05D008199 1.8e-31 139.8 95 74.7
Sp6g26660 Schrenkiella parvula HOM05D006461 ORTHO05D008199 6.9e-31 137.9 95 73.7
THA.LOC104802902 Tarenaya hassleriana HOM05D006461 ORTHO05D008199 9.0e-31 137.5 99 71.7
A03p08420 Brassica napus HOM05D006461 ORTHO05D008199 1.2e-30 137.1 141 55.3
BraA03t10165Z Brassica rapa HOM05D006461 ORTHO05D008199 1.2e-30 137.1 141 55.3
AUR62020207 Chenopodium quinoa HOM05D006461 ORTHO05D008199 1.2e-30 137.1 103 70.9
Haze_00341 Corylus avellana HOM05D006461 ORTHO05D000508 1.2e-30 137.1 153 56.2
Hund20961 Selenicereus undatus HOM05D006461 ORTHO05D008199 1.2e-30 137.1 104 71.2
AUR62001576 Chenopodium quinoa HOM05D006461 ORTHO05D008199 1.5e-30 136.7 87 77.0
AL6G28650 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 2.0e-30 136.3 95 72.6
BcaB01g05208 Brassica carinata HOM05D006461 ORTHO05D008199 2.0e-30 136.3 95 73.7
C03p09820 Brassica napus HOM05D006461 ORTHO05D008199 2.0e-30 136.3 95 73.7
BolC3t13470H Brassica oleracea HOM05D006461 ORTHO05D008199 2.0e-30 136.3 95 73.7
EL10Ac7g16271 Beta vulgaris HOM05D006461 ORTHO05D008199 2.6e-30 136.0 83 79.5
BraA10t44244Z Brassica rapa HOM05D006461 ORTHO05D008199 2.6e-30 136.0 100 73.0
BcaC04g18779 Brassica carinata HOM05D006461 ORTHO05D008199 3.4e-30 135.6 95 72.6
C09p59590 Brassica napus HOM05D006461 ORTHO05D008199 3.4e-30 135.6 95 72.6
Thhalv10014786m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 3.4e-30 135.6 95 72.6
Os06g0484600 Oryza sativa ssp. japonica HOM05D006461 ORTHO05D008199 3.4e-30 135.6 104 68.3
BcaB01g04940 Brassica carinata HOM05D006461 ORTHO05D008199 4.5e-30 135.2 95 72.6
TWI60G1716 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 4.5e-30 135.2 102 69.6
BcaB08g36762 Brassica carinata HOM05D006461 ORTHO05D008199 5.9e-30 134.8 95 72.6
Carub.0006s1580 Capsella rubella HOM05D006461 ORTHO05D008199 1.0e-29 134.0 95 72.6
CARHR195620 Cardamine hirsuta HOM05D006461 ORTHO05D008199 1.0e-29 134.0 95 72.6
BolC9t58798H Brassica oleracea HOM05D006461 ORTHO05D008199 1.7e-29 133.3 95 71.6
Aa31LG11G12100 Aethionema arabicum HOM05D006461 ORTHO05D008199 5.0e-29 131.7 93 71.0
Lj7P538T25 Lonicera japonica HOM05D006461 ORTHO05D008199 5.0e-29 131.7 77 84.4
Pp3c1_12810 Physcomitrium patens HOM05D006461 ORTHO05D008199 8.5e-29 131.0 115 62.6
Sabra13G0064300 Salix brachista HOM05D006461 ORTHO05D008199 8.5e-29 131.0 95 72.6
SMO358G0572 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 1.1e-28 130.6 99 68.7
Zm00001eb278180 Zea mays HOM05D006461 ORTHO05D008199 1.4e-28 130.2 101 69.3
Actinidia24631 Actinidia chinensis HOM05D006461 ORTHO05D008199 1.9e-28 129.8 81 81.5
AagrBONN_evm.TU.Sc2ySwM_117.1385 Anthoceros agrestis HOM05D006461 ORTHO05D008199 4.2e-28 128.6 124 57.3
HPP92_003741 Vanilla planifolia HOM05D001207 ORTHO05D007056 1.2e-27 127.1 74 83.8
Hund18806 Selenicereus undatus HOM05D006461 ORTHO05D008199 5.7e-25 118.2 92 65.2
Cre09.g394701 Chlamydomonas reinhardtii HOM05D006461 ORTHO05D008199 2.9e-21 105.9 79 65.8
Sed0001670 Sechium edule HOM05D006461 ORTHO05D008199 6.5e-21 104.8 118 51.7
PRCOL_00004611 Prasinoderma coloniale HOM05D006461 ORTHO05D008199 5.5e-20 101.7 100 51.0
SMO358G0215 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 2.3e-18 96.3 79 53.2
CSS0025765 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 1.5e-17 93.6 183 37.7
CSS0040075 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 1.5e-17 93.6 183 37.7
MCO16G354 Micromonas commoda HOM05D006461 ORTHO05D008199 1.3e-16 90.5 88 55.7
Eucgr.A02995 Eucalyptus grandis HOM05D006461 ORTHO05D008199 6.3e-16 88.2 49 85.7
Lalb_Chr19g0127781 Lupinus albus HOM05D006461 ORTHO05D008199 1.8e-15 86.7 48 87.5
SHI39095 Sapria himalayana HOM05D006461 ORTHO05D008199 6.5e-13 78.2 122 43.4
Actinidia28897 Actinidia chinensis HOM05D006461 ORTHO05D008199 5.5e-12 75.1 121 41.3
AL3G12640 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 5.3e-07 58.5 73 52.1
Cpa.g.sc2589.1 Carica papaya HOM05D006461 ORTHO05D008199 7.0e-07 58.2 50 62.0
AL3G12680 Arabidopsis lyrata HOM05D000403 ORTHO05D000350 9.1e-07 57.8 50 62.0
Thhalv10002241m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 9.1e-07 57.8 44 68.2


User provided reference genes

Program Settings