Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400026422 Solanum tuberosum HOM05D006138 ORTHO05D007778 2.1e-214 748.8 387 100.0
Solyc09g092180.3 Solanum lycopersicum HOM05D006138 ORTHO05D007778 3.1e-186 655.2 369 90.8
Sopen09g035050 Solanum pennellii HOM05D006138 ORTHO05D007778 9.0e-186 653.7 369 90.8
CAN.G1565.12 Capsicum annuum HOM05D006138 ORTHO05D007778 2.9e-176 622.1 370 87.8
Nitab4.5_0000401g0220 Nicotiana tabacum HOM05D006138 ORTHO05D007778 7.2e-151 537.7 367 78.7
Peaxi162Scf00047g00230 Petunia axillaris HOM05D006138 ORTHO05D007778 1.4e-146 523.5 369 75.1
Nitab4.5_0003101g0010 Nicotiana tabacum HOM05D006138 ORTHO05D007778 5.4e-138 495.0 367 74.1
Dinv27208 Davidia involucrata HOM05D006138 ORTHO05D007778 4.4e-108 395.6 365 57.0
Oeu025031.1 Olea europaea HOM05D006138 ORTHO05D007778 2.5e-103 379.8 363 54.0
Cc03_g08330 Coffea canephora HOM05D006138 ORTHO05D007778 3.1e-101 372.9 368 54.1
vmacro15557 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 8.9e-101 371.3 367 52.9
Thecc.04G198400 Theobroma cacao HOM05D006138 ORTHO05D007778 4.4e-100 369.0 369 52.8
GSVIVG01020999001 Vitis vinifera HOM05D006138 ORTHO05D007778 4.2e-98 362.5 363 52.9
Gohir.A05G323100 Gossypium hirsutum HOM05D006138 ORTHO05D007778 5.4e-98 362.1 362 52.8
Cpa.g.sc83.29 Carica papaya HOM05D006138 ORTHO05D007778 9.2e-98 361.3 363 51.0
Gorai.009G350500 Gossypium raimondii HOM05D006138 ORTHO05D007778 9.2e-98 361.3 362 52.8
TAR362G0162 Trochodendron aralioides HOM05D006138 ORTHO05D007778 2.7e-97 359.8 363 51.2
Lj6A392G25 Lonicera japonica HOM05D006138 ORTHO05D007778 2.3e-96 356.7 400 51.0
TWI09G0334 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 2.3e-96 356.7 361 50.4
MSTRG.9735 Avicennia marina HOM05D006138 ORTHO05D007778 2.5e-95 353.2 364 51.6
Gohir.D05G326000 Gossypium hirsutum HOM05D006138 ORTHO05D007778 3.3e-95 352.8 362 52.2
TWI53G0419 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 4.7e-94 349.0 361 49.9
Manes.15G055900 Manihot esculenta HOM05D006138 ORTHO05D007778 6.2e-94 348.6 363 52.1
DCAR_026640 Daucus carota HOM05D006138 ORTHO05D007778 8.1e-94 348.2 368 51.9
Actinidia38756 Actinidia chinensis HOM05D006138 ORTHO05D007778 1.1e-93 347.8 365 51.2
Nn1g07955 Nelumbo nucifera HOM05D006138 ORTHO05D007778 5.3e-93 345.5 363 51.0
SalBow8G0822 Salvia bowleyana HOM05D006138 ORTHO05D007778 5.8e-92 342.0 395 49.1
SalBow8G2056 Salvia bowleyana HOM05D006138 ORTHO05D007778 7.6e-92 341.7 395 49.1
Lj6A407G21 Lonicera japonica HOM05D006138 ORTHO05D007778 1.7e-91 340.5 400 50.0
Atru.chr4.1604 Acer truncatum HOM05D006138 ORTHO05D007778 6.4e-91 338.6 333 52.9
Cfa014952 Carpinus fangiana HOM05D006138 ORTHO05D007778 1.1e-90 337.8 363 51.0
SGA_v2.0_scaffold19G08768 Striga asiatica HOM05D006138 ORTHO05D007778 4.6e-89 332.4 370 48.6
Migut.G00745 Erythranthe guttata HOM05D006138 ORTHO05D007778 1.7e-88 330.5 367 51.0
CiPaw.02G065100 Carya illinoinensis HOM05D006138 ORTHO05D007778 4.3e-87 325.9 362 48.3
Potri.001G317900 Populus trichocarpa HOM05D006138 ORTHO05D007778 1.6e-86 323.9 363 46.8
RhsimUnG0035600 Rhododendron simsii HOM05D006138 ORTHO05D007778 1.1e-85 321.2 493 40.0
Rhsim02G0060900 Rhododendron simsii HOM05D006138 ORTHO05D007778 1.4e-85 320.9 510 39.0
vmacro15559 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 1.4e-85 320.9 380 45.8
THA.LOC104804805 Tarenaya hassleriana HOM05D006138 ORTHO05D007778 5.3e-85 318.9 362 45.3
Lsat_1_v5_gn_6_60661 Lactuca sativa HOM05D006138 ORTHO05D007778 7.6e-84 315.1 359 48.2
MD04G1014100 Malus domestica HOM05D006138 ORTHO05D007778 2.4e-82 310.1 366 46.7
Sp3g21610 Schrenkiella parvula HOM05D006138 ORTHO05D007778 4.2e-82 309.3 374 45.2
COL.COLO4_20197 Corchorus olitorius HOM05D006138 ORTHO05D007778 7.1e-82 308.5 362 47.2
AL3G38900 Arabidopsis lyrata HOM05D006138 ORTHO05D007778 6.0e-81 305.4 359 46.2
Carub.0003s2421 Capsella rubella HOM05D006138 ORTHO05D007778 2.3e-80 303.5 361 45.4
Sc13g0000300 Simmondsia chinensis HOM05D006138 ORTHO05D007778 5.1e-80 302.4 363 45.2
HanXRQChr07g0185891 Helianthus annuus HOM05D006138 ORTHO05D007778 8.7e-80 301.6 362 47.2
CANSAT78G1344 Cannabis sativa HOM05D006138 ORTHO05D007778 1.1e-79 301.2 362 46.1
AT3G23910 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 1.9e-79 300.4 359 44.8
A07p08490 Brassica napus HOM05D006138 ORTHO05D007778 7.4e-79 298.5 362 45.0
CANSAT78G2425 Cannabis sativa HOM05D006138 ORTHO05D007778 7.4e-79 298.5 362 45.9
Thhalv10002763m.g Eutrema salsugineum HOM05D006138 ORTHO05D007778 9.6e-79 298.1 342 47.1
CSS0014339 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 6.9e-77 292.0 251 59.8
Aa31LG8G10490 Aethionema arabicum HOM05D006138 ORTHO05D007778 7.6e-76 288.5 379 41.7
BraA07t28634Z Brassica rapa HOM05D006138 ORTHO05D007778 1.7e-75 287.3 369 44.2
CSS0015025 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 2.2e-75 287.0 251 59.4
CsaV3_3G010820 Cucumis sativus L. HOM05D006138 ORTHO05D007778 6.4e-75 285.4 365 45.2
PSO017G1394 Papaver somniferum HOM05D006138 ORTHO05D007778 6.4e-75 285.4 365 42.7
BcaC06g35587 Brassica carinata HOM05D006138 ORTHO05D007778 8.4e-75 285.0 362 43.1
C07p13230 Brassica napus HOM05D006138 ORTHO05D007778 8.4e-75 285.0 362 43.1
AT3G24255 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 2.5e-74 283.5 339 46.0
BcaB06g26554 Brassica carinata HOM05D006138 ORTHO05D007778 4.6e-73 279.3 355 43.9
BolC7t41815H Brassica oleracea HOM05D006138 ORTHO05D007778 3.0e-72 276.6 372 42.2
Sabra16G0201200 Salix brachista HOM05D006138 ORTHO05D007778 5.1e-72 275.8 471 36.9
Nitab4.5_0001652g0120 Nicotiana tabacum HOM05D006138 ORTHO05D007778 1.1e-71 274.6 208 71.6
Sed0019269 Sechium edule HOM05D006138 ORTHO05D007778 4.3e-71 272.7 364 42.9
AUR62020846 Chenopodium quinoa HOM05D006138 ORTHO05D007778 9.6e-71 271.6 346 44.5
ClCG05G003180 Citrullus lanatus HOM05D006138 ORTHO05D007778 8.2e-70 268.5 365 44.1
Eucgr.H00039 Eucalyptus grandis HOM05D006138 ORTHO05D007778 1.7e-67 260.8 336 44.0
ECA233G3278 Erigeron canadensis HOM05D006138 ORTHO05D007778 4.9e-67 259.2 340 43.5
VMungo1383G1063 Vigna mungo HOM05D000127 ORTHO05D000243 6.5e-67 258.8 377 40.1
PGR004G2157 Punica granatum HOM05D006138 ORTHO05D007778 1.6e-65 254.2 363 40.2
Glyma.11G255500 Glycine max HOM05D006138 ORTHO05D007778 3.5e-65 253.1 347 40.9
Phvul.001G267400 Phaseolus vulgaris HOM05D006138 ORTHO05D007778 7.9e-65 251.9 361 40.2
PSO063G4547 Papaver somniferum HOM05D006138 ORTHO05D007778 1.3e-64 251.1 326 45.1
Ca_16395_v3 Cicer arietinum L. HOM05D006138 ORTHO05D007778 2.3e-64 250.4 363 39.4
QL10p052654 Quercus lobata HOM05D006138 ORTHO05D007778 3.9e-64 249.6 492 34.8
Aqoxy2G04005 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 8.7e-64 248.4 355 41.4
Lj6g0009885 Lotus japonicus HOM05D006138 ORTHO05D007778 8.7e-64 248.4 363 39.4
arahy.Tifrunner.gnm1.ann1.3M33GA Arachis hypogaea HOM05D006138 ORTHO05D007778 1.1e-63 248.1 364 40.1
CDE05G2116 Ceratophyllum demersum HOM05D006138 ORTHO05D007778 1.1e-63 248.1 353 41.6
Aqoxy360s001 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 3.3e-63 246.5 355 41.7
arahy.Tifrunner.gnm1.ann1.HYZ2KB Arachis hypogaea HOM05D006138 ORTHO05D007778 4.3e-63 246.1 364 39.6
Ah.04g149320 Amaranthus hybridus HOM05D006138 ORTHO05D007778 1.6e-62 244.2 365 39.7
Eucgr.L02926 Eucalyptus grandis HOM05D006138 ORTHO05D007778 1.3e-59 234.6 333 41.4
Psat5g102360 Pisum sativum HOM05D006138 ORTHO05D007778 4.8e-54 216.1 369 35.2
Lalb_Chr23g0278421 Lupinus albus HOM05D006138 ORTHO05D007778 1.1e-53 214.9 361 36.6
AUR62018570 Chenopodium quinoa HOM05D006138 ORTHO05D007778 3.1e-53 213.4 333 39.3
EL10Ac3g07466 Beta vulgaris HOM05D006138 ORTHO05D007778 2.5e-50 203.8 352 37.5
Gohir.A12G078622 Gossypium hirsutum HOM05D006138 ORTHO05D007778 2.7e-49 200.3 229 47.6
Ciclev10005758m.g Citrus clementina HOM05D006138 ORTHO05D007778 1.0e-48 198.4 170 58.8
Hma1.2p1_0017F.1_g011170 Hydrangea macrophylla HOM05D006138 ORTHO05D007778 7.4e-47 192.2 212 48.1
Os04g0379800 Oryza sativa ssp. japonica HOM05D006138 ORTHO05D007778 7.4e-47 192.2 344 35.2
unitig_37.g12032 Utricularia gibba HOM05D006138 ORTHO05D007778 2.8e-46 190.3 250 43.2
RcHm_v2.0_Chr4g0414021 Rosa chinensis HOM05D006138 ORTHO05D007778 1.4e-45 188.0 258 41.9
HPP92_023190 Vanilla planifolia HOM05D006138 ORTHO05D007778 3.1e-45 186.8 351 33.6
Haze_11642 Corylus avellana HOM05D006138 ORTHO05D007778 5.3e-45 186.0 323 38.4
Glyma.18G001700 Glycine max HOM05D006138 ORTHO05D007778 1.3e-43 181.4 199 47.2
Oeu025032.1 Olea europaea HOM05D006138 ORTHO05D007778 2.2e-43 180.6 134 66.4
FAN12G1205 Fragaria x ananassa HOM05D006138 ORTHO05D007778 1.0e-40 171.8 259 39.8
FvH4_4g13460 Fragaria vesca HOM05D006138 ORTHO05D007778 1.8e-40 171.0 259 39.8
FAN22G1553 Fragaria x ananassa HOM05D006138 ORTHO05D007778 2.3e-40 170.6 259 39.8
TPR.G24162 Trifolium pratense HOM05D006138 ORTHO05D007778 4.4e-39 166.4 260 38.5
Prupe.1G161100 Prunus persica HOM05D006138 ORTHO05D007778 2.6e-36 157.1 214 39.3
Duzib268G1255 Durio zibethinus HOM05D006138 ORTHO05D007778 2.9e-35 153.7 137 57.7
Gohir.D12G210200 Gossypium hirsutum HOM05D006138 ORTHO05D007778 4.2e-34 149.8 188 44.7
Hund24401 Selenicereus undatus HOM05D006138 ORTHO05D007778 1.8e-29 134.4 215 40.0
MELO3C006299.2 Cucumis melo HOM05D006138 ORTHO05D007778 1.6e-28 131.3 213 38.5
FAN07G2199 Fragaria x ananassa HOM05D006138 ORTHO05D007778 2.6e-23 114.0 229 34.1
Zm00001eb085830 Zea mays HOM05D006138 ORTHO05D007778 2.2e-22 110.9 376 26.3
RcHm_v2.0_Chr4g0414071 Rosa chinensis HOM05D006138 ORTHO05D007778 1.8e-21 107.8 126 50.8
Phvul.001G135400 Phaseolus vulgaris HOM05D006138 ORTHO05D007778 7.5e-15 85.9 111 38.7
Hund29337 Selenicereus undatus HOM05D006138 ORTHO05D007778 9.8e-15 85.5 68 60.3
Hund29338 Selenicereus undatus HOM05D006138 ORTHO05D007778 9.8e-15 85.5 68 60.3
Pp3c4_4010 Physcomitrium patens HOM05D058747 ORTHO05D007778 8.3e-14 82.4 252 27.0
Actinidia16488 Actinidia chinensis HOM05D006138 ORTHO05D007778 1.1e-13 82.0 83 49.4
Pp3c12_25780 Physcomitrium patens HOM05D058747 ORTHO05D007778 7.0e-13 79.3 252 22.6
Mapoly0008s0044 Marchantia polymorpha HOM05D006138 ORTHO05D007778 2.8e-09 67.4 307 22.1
Nn1g00061 Nelumbo nucifera HOM05D006138 ORTHO05D007778 3.6e-09 67.0 113 33.6
Duzib268G0476 Durio zibethinus HOM05D006138 ORTHO05D007778 1.5e-07 61.6 112 33.0
SHI01022 Sapria himalayana HOM05D006138 ORTHO05D007778 2.6e-07 60.8 73 42.5
Duzib268G0147 Durio zibethinus HOM05D006138 ORTHO05D007778 4.4e-07 60.1 81 38.3
FAN17G0457 Fragaria x ananassa HOM05D006138 ORTHO05D007778 1.7e-06 58.2 86 34.9


User provided reference genes

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