Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 3.3e-203 711.4 348 100.0
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 7.6e-192 673.7 348 95.4
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 7.6e-184 647.1 349 90.5
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 6.0e-181 637.5 351 88.0
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 5.8e-176 620.9 343 89.8
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 1.5e-171 606.3 346 85.8
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 5.1e-148 528.1 346 74.6
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 4.1e-145 518.5 342 73.4
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 7.7e-144 514.2 345 74.2
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 5.0e-143 511.5 335 74.6
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 1.4e-140 503.4 325 75.4
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 2.6e-139 499.2 350 71.1
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 3.3e-139 498.8 342 70.5
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 4.4e-139 498.4 341 72.4
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 4.4e-139 498.4 346 69.9
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 1.7e-138 496.5 339 70.8
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 2.2e-138 496.1 343 71.4
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 9.1e-137 490.7 344 68.3
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 1.5e-136 490.0 343 72.0
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 3.5e-136 488.8 349 70.5
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 1.7e-135 486.5 325 72.3
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 2.2e-135 486.1 320 71.6
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 6.5e-135 484.6 322 72.4
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 6.5e-135 484.6 336 69.0
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 8.5e-135 484.2 320 71.2
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.1e-134 483.8 320 70.9
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 1.6e-133 479.9 320 70.0
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 1.6e-133 479.9 323 71.2
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 2.7e-133 479.2 338 67.8
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 3.6e-133 478.8 350 68.6
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 3.6e-133 478.8 347 68.3
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 3.6e-133 478.8 329 69.9
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 4.7e-133 478.4 336 68.5
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 6.1e-133 478.0 332 68.7
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 3.0e-132 475.7 350 67.1
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 5.2e-132 474.9 336 68.5
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 1.1e-131 473.8 320 70.6
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 3.7e-130 468.8 342 68.4
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 6.3e-130 468.0 322 69.6
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 6.3e-130 468.0 322 69.3
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 1.1e-129 467.2 320 68.8
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 1.1e-129 467.2 320 68.8
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 1.4e-129 466.8 320 70.6
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 4.1e-129 465.3 313 70.9
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 2.7e-128 462.6 346 67.3
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 3.5e-128 462.2 350 65.4
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 4.5e-128 461.8 340 65.0
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 8.5e-127 457.6 321 69.2
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 1.1e-126 457.2 321 68.5
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 2.5e-126 456.1 312 69.2
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 5.5e-126 454.9 340 67.4
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 1.2e-125 453.8 327 67.3
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 1.2e-125 453.8 317 68.5
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 2.7e-125 452.6 340 65.0
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 1.8e-124 449.9 346 65.9
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.3e-124 449.5 321 69.5
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.3e-124 449.5 321 69.5
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 3.0e-124 449.1 327 67.0
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 2.0e-123 446.4 306 72.5
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 9.8e-123 444.1 347 66.3
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 9.8e-123 444.1 336 64.0
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 1.4e-121 440.3 313 68.7
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 1.4e-121 440.3 343 65.0
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 1.8e-121 439.9 343 65.0
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 9.1e-121 437.6 334 65.6
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 1.2e-120 437.2 313 68.1
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 2.0e-120 436.4 337 62.9
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 3.5e-120 435.6 338 64.2
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 2.9e-119 432.6 312 66.0
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 6.5e-119 431.4 321 66.0
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 2.6e-115 419.5 344 60.8
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 4.4e-115 418.7 312 62.2
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 1.3e-114 417.2 346 61.8
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 3.1e-113 412.5 289 70.9
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 1.6e-112 410.2 293 69.6
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 1.6e-112 410.2 321 63.6
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 2.0e-112 409.8 315 66.0
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 1.7e-111 406.8 383 56.4
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 1.7e-111 406.8 294 68.4
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 2.9e-106 389.4 328 60.1
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 1.2e-104 384.0 323 63.5
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 3.9e-103 379.0 281 67.6
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 1.4e-100 370.5 254 72.8
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 1.8e-100 370.2 311 60.1
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 1.6e-96 357.1 244 70.1
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 2.9e-90 336.3 228 71.1
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 3.9e-87 325.9 338 51.5
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 8.6e-87 324.7 300 52.7
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 9.9e-83 311.2 340 50.3
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 3.2e-81 306.2 312 53.5
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 7.8e-80 301.6 322 53.4
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 2.3e-79 300.1 214 69.6
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 1.6e-77 293.9 199 70.4
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 1.4e-76 290.8 316 45.3
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 1.2e-72 277.7 196 67.3
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 2.1e-69 266.9 209 63.6
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 2.5e-62 243.4 324 40.4
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 1.4e-60 237.7 356 37.1
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 3.5e-56 223.0 174 64.9
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 1.6e-53 214.2 262 40.8
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 1.1e-46 191.4 203 48.8
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 2.1e-45 187.2 319 37.0
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 1.2e-40 171.4 172 49.4
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 4.6e-40 169.5 106 79.2
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 1.5e-38 164.5 230 41.7
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 3.3e-38 163.3 118 67.8
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.5e-35 154.5 106 67.9
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 1.1e-30 138.3 102 65.7
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 3.3e-30 136.7 350 29.7
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 7.4e-30 135.6 90 71.1
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 8.2e-29 132.1 88 69.3
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 1.1e-28 131.7 135 53.3
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 1.4e-28 131.3 98 70.4
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 2.7e-24 117.1 287 29.3
arahy.Tifrunner.gnm1.ann1.G72GGE Arachis hypogaea HOM05D000916 ORTHO05D007921 5.5e-09 66.2 155 34.8
Eucgr.F04110 Eucalyptus grandis HOM05D000916 ORTHO05D007921 1.6e-08 64.7 114 39.5
ClCG08G002000 Citrullus lanatus HOM05D000916 ORTHO05D007921 6.1e-08 62.8 112 37.5
MBI03_g28954_MAGBIO Magnolia biondii HOM05D000916 ORTHO05D007921 1.0e-07 62.0 144 33.3
AUR62017447 Chenopodium quinoa HOM05D000916 ORTHO05D007921 1.4e-07 61.6 205 30.2
Lalb_Chr02g0149821 Lupinus albus HOM05D000916 ORTHO05D007921 1.4e-07 61.6 108 38.9
HanXRQChr09g0266951 Helianthus annuus HOM05D000916 ORTHO05D007921 1.8e-07 61.2 105 37.1
VMungo0720G0569 Vigna mungo HOM05D000916 ORTHO05D007921 1.8e-07 61.2 111 36.9
MSTRG.25473 Avicennia marina HOM05D000916 ORTHO05D007921 2.3e-07 60.8 173 28.9
Oeu051786.1 Olea europaea HOM05D000916 ORTHO05D007921 3.0e-07 60.5 101 35.6
Sed0003753 Sechium edule HOM05D000916 ORTHO05D007921 6.8e-07 59.3 112 38.4
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 8.8e-07 58.9 30 76.7
TPR.G16625 Trifolium pratense HOM05D000916 ORTHO05D007921 8.8e-07 58.9 102 42.2
Zm00001eb349130 Zea mays HOM05D000916 ORTHO05D007921 8.8e-07 58.9 102 37.3
Glyma.20G214000 Glycine max HOM05D000916 ORTHO05D007921 1.2e-06 58.5 111 36.0
Os05g0419000 Oryza sativa ssp. japonica HOM05D000916 ORTHO05D007921 1.2e-06 58.5 100 36.0
CiPaw.03G193200 Carya illinoinensis HOM05D000916 ORTHO05D007921 1.5e-06 58.2 105 39.0
MELO3C025041.2 Cucumis melo HOM05D000916 ORTHO05D007921 1.5e-06 58.2 110 37.3
arahy.Tifrunner.gnm1.ann1.Y677VA Arachis hypogaea HOM05D000916 ORTHO05D007921 2.0e-06 57.8 155 33.5
Cfa022925 Carpinus fangiana HOM05D000916 ORTHO05D007921 2.0e-06 57.8 180 31.1
Haze_13434 Corylus avellana HOM05D000916 ORTHO05D007921 2.0e-06 57.8 106 36.8
Psat6g112920 Pisum sativum HOM05D000916 ORTHO05D007921 2.0e-06 57.8 102 42.2
AUR62032516 Chenopodium quinoa HOM05D000916 ORTHO05D007921 2.6e-06 57.4 86 41.9
Medtr1g076920 Medicago truncatula HOM05D000916 ORTHO05D007921 3.4e-06 57.0 88 42.0
TWI12G0975 Tripterygium wilfordii HOM05D000916 ORTHO05D007921 3.4e-06 57.0 279 27.2
Hma1.2p1_0278F.1_g111780 Hydrangea macrophylla HOM05D000916 ORTHO05D007921 5.7e-06 56.2 102 35.3
Potri.017G115350 Populus trichocarpa HOM05D006950 ORTHO05D008798 5.7e-06 56.2 39 64.1
Sed0022819 Sechium edule HOM05D000363 ORTHO05D000236 9.8e-06 55.5 109 34.9


User provided reference genes

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