Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 1.3e-85 319.7 163 100.0
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 2.3e-82 308.9 163 96.9
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 7.4e-81 303.9 163 95.7
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 1.0e-77 293.5 163 90.8
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 1.3e-74 283.1 163 89.0
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 1.1e-60 236.9 159 75.5
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 3.0e-58 228.8 156 72.4
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 2.8e-56 222.2 164 70.7
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 3.7e-56 221.9 151 72.8
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 3.1e-55 218.8 157 69.4
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 1.5e-54 216.5 149 71.1
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 7.7e-54 214.2 150 70.7
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 1.3e-53 213.4 154 68.8
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 2.2e-53 212.6 151 70.2
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 2.9e-53 212.2 164 67.7
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 8.5e-53 210.7 163 67.5
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 8.5e-53 210.7 149 71.1
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 1.1e-52 210.3 153 69.9
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 1.9e-52 209.5 155 65.8
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 1.9e-52 209.5 143 72.0
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 1.6e-51 206.5 114 91.2
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 2.1e-51 206.1 156 67.3
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 4.7e-51 204.9 152 64.5
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 4.7e-51 204.9 155 67.1
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 4.7e-51 204.9 151 66.9
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 6.1e-51 204.5 153 65.4
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 8.0e-51 204.1 164 65.2
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 8.0e-51 204.1 158 63.3
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 8.0e-51 204.1 152 66.4
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 1.0e-50 203.8 147 68.0
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 3.0e-50 202.2 154 66.9
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 8.8e-50 200.7 152 66.4
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 3.3e-49 198.7 147 66.0
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 4.4e-49 198.4 158 66.5
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 7.4e-49 197.6 164 62.2
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 1.7e-48 196.4 159 59.7
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 2.2e-48 196.1 149 65.1
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 2.2e-48 196.1 159 59.7
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 1.1e-47 193.7 157 61.1
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 1.1e-47 193.7 183 58.5
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 2.4e-47 192.6 152 63.8
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 3.1e-47 192.2 149 63.1
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 3.1e-47 192.2 155 62.6
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 5.3e-47 191.4 133 68.4
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 5.3e-47 191.4 159 61.6
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 7.0e-47 191.0 153 63.4
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 1.2e-46 190.3 131 73.3
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 1.6e-46 189.9 132 67.4
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 3.5e-46 188.7 174 58.6
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 4.5e-46 188.3 151 61.6
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 4.5e-46 188.3 150 65.3
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 7.7e-46 187.6 135 69.6
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 7.7e-46 187.6 149 60.4
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 1.3e-45 186.8 153 58.2
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 1.3e-45 186.8 157 57.3
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 2.2e-45 186.0 127 68.5
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 2.9e-45 185.7 151 59.6
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 3.8e-45 185.3 174 56.3
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 3.8e-45 185.3 151 64.9
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 3.8e-45 185.3 144 62.5
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 8.5e-45 184.1 148 56.8
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 8.5e-45 184.1 151 62.3
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 1.1e-44 183.7 150 60.7
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 1.1e-44 183.7 151 63.6
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 2.5e-44 182.6 155 58.1
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 2.5e-44 182.6 159 59.1
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 7.2e-44 181.0 153 59.5
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 7.2e-44 181.0 126 66.7
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 1.2e-43 180.3 138 66.7
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 2.7e-43 179.1 159 57.2
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 2.7e-43 179.1 159 57.2
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 2.7e-43 179.1 159 57.2
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 2.7e-43 179.1 159 57.9
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 2.7e-43 179.1 151 60.9
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 4.7e-43 178.3 159 58.5
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 1.4e-42 176.8 148 59.5
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 1.4e-42 176.8 178 54.5
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 1.8e-42 176.4 151 60.9
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 3.0e-42 175.6 148 60.8
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 4.0e-42 175.3 169 55.0
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 8.8e-42 174.1 159 57.2
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 2.8e-40 169.1 133 60.9
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 8.3e-40 167.5 147 54.4
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 1.1e-39 167.2 160 55.0
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 1.4e-39 166.8 124 62.1
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 2.4e-39 166.0 115 68.7
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 4.1e-39 165.2 153 54.9
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 3.8e-37 158.7 156 53.8
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 3.8e-37 158.7 156 53.8
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 5.0e-37 158.3 140 60.0
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 2.7e-35 152.5 112 64.3
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 3.6e-35 152.1 115 62.6
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 6.3e-32 141.4 125 58.4
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 1.4e-31 140.2 161 46.6
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 1.2e-30 137.1 110 60.9
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 1.6e-30 136.7 155 47.7
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 5.0e-29 131.7 111 59.5
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 8.6e-29 131.0 146 45.9
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 8.0e-27 124.4 143 44.8
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 1.4e-26 123.6 144 47.9
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 2.2e-24 116.3 127 48.0
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 8.3e-24 114.4 87 62.1
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 4.1e-23 112.1 80 71.2
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 9.2e-23 110.9 117 44.4
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 1.2e-22 110.5 114 55.3
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 4.5e-22 108.6 75 69.3
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 5.9e-22 108.2 75 69.3
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 1.0e-21 107.5 87 60.9
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 3.9e-21 105.5 76 63.2
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 1.5e-20 103.6 144 39.6
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 2.5e-20 102.8 81 64.2
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 4.0e-18 95.5 70 65.7
CAN.G285.15 Capsicum annuum HOM05D006886 ORTHO05D008494 1.9e-12 76.6 44 84.1
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 3.3e-12 75.9 96 39.6
Cre03.g201500 Chlamydomonas reinhardtii HOM05D006886 ORTHO05D008494 2.8e-11 72.8 139 30.9
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 8.0e-11 71.2 68 54.4
Ca_13745_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 3.2e-07 59.3 60 51.7
Actinidia10535 Actinidia chinensis HOM05D040481 ORTHO05D008494 7.8e-06 54.7 32 84.4


User provided reference genes

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