Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400026192 Solanum tuberosum HOM05D005781 ORTHO05D006835 1.3e-48 196.1 96 100.0
Sopen07g026470 Solanum pennellii HOM05D005781 ORTHO05D006835 6.1e-43 177.2 96 90.6
Solyc07g052913.1 Solanum lycopersicum HOM05D005781 ORTHO05D006835 2.5e-36 155.2 82 93.9
Nitab4.5_0008807g0010 Nicotiana tabacum HOM05D005781 ORTHO05D006835 2.3e-34 148.7 84 84.5
Nitab4.5_0001134g0180 Nicotiana tabacum HOM05D005781 ORTHO05D006835 8.9e-34 146.7 92 78.3
Nitab4.5_0003429g0070 Nicotiana tabacum HOM05D005781 ORTHO05D006835 5.8e-33 144.1 84 82.1
Peaxi162Scf00007g01414 Petunia axillaris HOM05D005781 ORTHO05D006835 4.9e-32 141.0 84 81.0
CiPaw.06G025900 Carya illinoinensis HOM05D005781 ORTHO05D006835 1.1e-31 139.8 96 64.6
Dinv12261 Davidia involucrata HOM05D005781 ORTHO05D006835 9.2e-31 136.7 96 66.7
Ciclev10023034m.g Citrus clementina HOM05D005781 ORTHO05D006835 1.2e-30 136.3 98 67.3
Cc05_g05310 Coffea canephora HOM05D005781 ORTHO05D006835 1.2e-30 136.3 96 66.7
MBI09_g43998_MAGBIO Magnolia biondii HOM05D005781 ORTHO05D006835 3.5e-30 134.8 95 67.4
Manes.01G244300 Manihot esculenta HOM05D005781 ORTHO05D006835 3.5e-30 134.8 98 64.3
Hund27185 Selenicereus undatus HOM05D005781 ORTHO05D006835 4.6e-30 134.4 100 65.0
Oeu052918.1 Olea europaea HOM05D005781 ORTHO05D006835 6.0e-30 134.0 96 64.6
Prupe.6G320800 Prunus persica HOM05D005781 ORTHO05D006835 6.0e-30 134.0 96 62.5
Ah.04g154640 Amaranthus hybridus HOM05D005781 ORTHO05D006835 7.8e-30 133.7 100 67.0
CDE02G0151 Ceratophyllum demersum HOM05D005781 ORTHO05D006835 1.0e-29 133.3 96 65.6
Manes.02G161400 Manihot esculenta HOM05D005781 ORTHO05D006835 1.0e-29 133.3 98 63.3
Nn8g40131 Nelumbo nucifera HOM05D005781 ORTHO05D006835 1.0e-29 133.3 96 63.5
Atru.chr1.3778 Acer truncatum HOM05D005781 ORTHO05D006835 1.3e-29 132.9 98 66.3
Nn6g33491 Nelumbo nucifera HOM05D005781 ORTHO05D006835 1.3e-29 132.9 96 64.6
Zm00001eb109340 Zea mays HOM05D005781 ORTHO05D006835 2.3e-29 132.1 96 66.7
Os01g0258600 Oryza sativa ssp. japonica HOM05D005781 ORTHO05D006835 5.0e-29 131.0 96 66.7
TWI63G1301 Tripterygium wilfordii HOM05D005781 ORTHO05D006835 6.6e-29 130.6 98 60.2
PGR031G1812 Punica granatum HOM05D005781 ORTHO05D006835 8.6e-29 130.2 96 63.5
Cfa015971 Carpinus fangiana HOM05D005781 ORTHO05D006835 1.1e-28 129.8 94 62.8
Rhsim06G0009100 Rhododendron simsii HOM05D005781 ORTHO05D006835 1.5e-28 129.4 97 60.8
MD04G1200700 Malus domestica HOM05D005781 ORTHO05D006835 1.9e-28 129.0 95 58.9
Thecc.01G232600 Theobroma cacao HOM05D005781 ORTHO05D006835 1.9e-28 129.0 98 63.3
Duzib138G0305 Durio zibethinus HOM05D005781 ORTHO05D006835 4.3e-28 127.9 98 62.2
MD12G1213200 Malus domestica HOM05D005781 ORTHO05D006835 4.3e-28 127.9 95 57.9
Sc01g0002510 Simmondsia chinensis HOM05D005781 ORTHO05D006835 4.3e-28 127.9 97 63.9
EL10Ac7g17336 Beta vulgaris HOM05D005781 ORTHO05D006835 5.6e-28 127.5 99 61.6
COL.COLO4_33816 Corchorus olitorius HOM05D005781 ORTHO05D006835 9.5e-28 126.7 98 64.3
Eucgr.D02385 Eucalyptus grandis HOM05D005781 ORTHO05D006835 1.2e-27 126.3 97 61.9
TWI38G0894 Tripterygium wilfordii HOM05D005781 ORTHO05D006835 1.6e-27 125.9 98 60.2
COL.COLO4_20773 Corchorus olitorius HOM05D005781 ORTHO05D006835 2.1e-27 125.6 98 63.3
Potri.001G082000 Populus trichocarpa HOM05D005781 ORTHO05D006835 2.8e-27 125.2 98 61.2
Oeu034339.1 Olea europaea HOM05D005781 ORTHO05D006835 3.6e-27 124.8 96 62.5
Rhsim13G0061400 Rhododendron simsii HOM05D005781 ORTHO05D006835 3.6e-27 124.8 97 58.8
Aqoxy5G00270 Aquilegia oxysepala HOM05D005781 ORTHO05D006835 8.0e-27 123.6 95 60.0
THA.LOC104825391 Tarenaya hassleriana HOM05D005781 ORTHO05D006835 8.0e-27 123.6 98 61.2
CANSAT54G0055 Cannabis sativa HOM05D005781 ORTHO05D006835 1.4e-26 122.9 96 59.4
Gohir.D07G208300 Gossypium hirsutum HOM05D005781 ORTHO05D006835 1.4e-26 122.9 98 60.2
Gohir.A07G202100 Gossypium hirsutum HOM05D005781 ORTHO05D006835 1.8e-26 122.5 98 60.2
ClCG05G000700 Citrullus lanatus HOM05D005781 ORTHO05D006835 2.3e-26 122.1 93 60.2
Gorai.001G235000 Gossypium raimondii HOM05D005781 ORTHO05D006835 5.2e-26 120.9 98 60.2
Lj4g0019743 Lotus japonicus HOM05D005781 ORTHO05D006835 8.9e-26 120.2 96 55.2
Lj3g0001466 Lotus japonicus HOM05D005781 ORTHO05D006835 1.2e-25 119.8 96 55.2
Sed0023332 Sechium edule HOM05D005781 ORTHO05D006835 1.2e-25 119.8 93 59.1
Sed0027756 Sechium edule HOM05D005781 ORTHO05D006835 1.2e-25 119.8 93 59.1
Lj4g0026259 Lotus japonicus HOM05D005781 ORTHO05D006835 2.0e-25 119.0 96 55.2
Gohir.A08G193000 Gossypium hirsutum HOM05D005781 ORTHO05D006835 4.4e-25 117.9 98 58.2
Gohir.D08G211000 Gossypium hirsutum HOM05D005781 ORTHO05D006835 4.4e-25 117.9 98 59.2
Gorai.004G223700 Gossypium raimondii HOM05D005781 ORTHO05D006835 4.4e-25 117.9 98 59.2
Migut.H01206 Erythranthe guttata HOM05D005781 ORTHO05D006835 5.8e-25 117.5 93 60.2
Ca_21653_v3 Cicer arietinum L. HOM05D005781 ORTHO05D006835 7.5e-25 117.1 96 55.2
arahy.Tifrunner.gnm1.ann1.EVJW84 Arachis hypogaea HOM05D005781 ORTHO05D006835 9.8e-25 116.7 96 57.3
Psat4g033600 Pisum sativum HOM05D005781 ORTHO05D006835 9.8e-25 116.7 96 57.3
RcHm_v2.0_Chr3g0455721 Rosa chinensis HOM05D005781 ORTHO05D006835 9.8e-25 116.7 96 55.2
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.3e-24 116.3 96 54.2
Glyma.08G084500 Glycine max HOM05D005781 ORTHO05D006835 1.3e-24 116.3 96 56.2
Dinv36923 Davidia involucrata HOM05D005781 ORTHO05D006835 1.7e-24 115.9 84 63.1
Glyma.05G129800 Glycine max HOM05D005781 ORTHO05D006835 2.2e-24 115.5 96 55.2
Atru.chr5.698 Acer truncatum HOM05D005781 ORTHO05D006835 2.9e-24 115.2 95 58.9
Lsat_1_v5_gn_9_14361 Lactuca sativa HOM05D005781 ORTHO05D006835 2.9e-24 115.2 98 59.2
ECA247G2075 Erigeron canadensis HOM05D005781 ORTHO05D006835 3.7e-24 114.8 97 56.7
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 3.7e-24 114.8 96 53.1
FAN09G0731 Fragaria x ananassa HOM05D005781 ORTHO05D006835 3.7e-24 114.8 96 53.1
Medtr4g115740 Medicago truncatula HOM05D005781 ORTHO05D006835 3.7e-24 114.8 96 54.2
MELO3C006010.2 Cucumis melo HOM05D005781 ORTHO05D006835 4.9e-24 114.4 105 56.2
Os06g0184100 Oryza sativa ssp. japonica HOM05D005781 ORTHO05D006835 6.4e-24 114.0 84 67.9
Hma1.2p1_0841F.1_g227020 Hydrangea macrophylla HOM05D005781 ORTHO05D006835 8.3e-24 113.6 85 64.7
CSS0033648 Camellia sinensis var. sinensis HOM05D005781 ORTHO05D006835 1.1e-23 113.2 84 61.9
CsaV3_3G007920 Cucumis sativus L. HOM05D005781 ORTHO05D006835 1.9e-23 112.5 105 56.2
DCAR_003312 Daucus carota HOM05D005781 ORTHO05D006835 1.9e-23 112.5 97 54.6
DCAR_022248 Daucus carota HOM05D005781 ORTHO05D006835 1.9e-23 112.5 93 58.1
Cpa.g.c32851 Carica papaya HOM05D005781 ORTHO05D006835 3.2e-23 111.7 86 62.8
Haze_00504 Corylus avellana HOM05D005781 ORTHO05D006835 4.1e-23 111.3 84 61.9
QL04p074672 Quercus lobata HOM05D005781 ORTHO05D006835 5.4e-23 110.9 93 55.9
Cfa011814 Carpinus fangiana HOM05D005781 ORTHO05D006835 9.2e-23 110.2 96 56.2
CSS0000543 Camellia sinensis var. sinensis HOM05D005781 ORTHO05D006835 1.2e-22 109.8 84 59.5
vmacro02893 Vaccinium macrocarpon HOM05D005781 ORTHO05D006835 1.2e-22 109.8 95 55.8
Lalb_Chr13g0300501 Lupinus albus HOM05D005781 ORTHO05D006835 2.1e-22 109.0 96 54.2
Phvul.002G194100 Phaseolus vulgaris HOM05D005781 ORTHO05D006835 2.3e-21 105.5 96 50.0
Sabra01G0058900 Salix brachista HOM05D005781 ORTHO05D006835 3.0e-21 105.1 89 57.3
RcHm_v2.0_Chr1g0322091 Rosa chinensis HOM05D005781 ORTHO05D006835 6.6e-21 104.0 86 54.7
Gohir.D05G278050 Gossypium hirsutum HOM05D005781 ORTHO05D006835 8.6e-21 103.6 86 57.0
unitig_0.g2200 Utricularia gibba HOM05D005781 ORTHO05D006835 1.5e-20 102.8 91 54.9
vmacro12515 Vaccinium macrocarpon HOM05D005781 ORTHO05D006835 1.5e-20 102.8 88 56.8
SalBow1G0716 Salvia bowleyana HOM05D005781 ORTHO05D006835 2.5e-20 102.1 96 52.1
Gorai.009G291400 Gossypium raimondii HOM05D005781 ORTHO05D006835 4.3e-20 101.3 86 55.8
THA.LOC104825885 Tarenaya hassleriana HOM05D005781 ORTHO05D006835 4.3e-20 101.3 86 57.0
BcaB07g31735 Brassica carinata HOM05D005781 ORTHO05D006835 1.6e-19 99.4 99 49.5
Zm00001eb374690 Zea mays HOM05D005781 ORTHO05D006835 1.6e-19 99.4 65 69.2
ATR0626G090 Amborella trichopoda HOM05D005781 ORTHO05D006835 2.1e-19 99.0 84 52.4
arahy.Tifrunner.gnm1.ann1.V38LZ0 Arachis hypogaea HOM05D005781 ORTHO05D006835 2.8e-19 98.6 132 41.7
Thhalv10022933m.g Eutrema salsugineum HOM05D005781 ORTHO05D006835 4.7e-19 97.8 99 48.5
Atru.chr1.3777 Acer truncatum HOM05D005781 ORTHO05D006835 6.2e-19 97.4 82 61.0
TPR.G40143 Trifolium pratense HOM05D005781 ORTHO05D006835 8.1e-19 97.1 84 52.4
Thhalv10015111m.g Eutrema salsugineum HOM05D005781 ORTHO05D006835 1.4e-18 96.3 100 47.0
Rhsim06G0009300 Rhododendron simsii HOM05D005781 ORTHO05D006835 1.8e-18 95.9 73 57.5
Sp6g27160 Schrenkiella parvula HOM05D005781 ORTHO05D006835 1.8e-18 95.9 101 46.5
Medtr5g009535 Medicago truncatula HOM05D005781 ORTHO05D006835 5.2e-18 94.4 84 50.0
BcaB01g04964 Brassica carinata HOM05D005781 ORTHO05D006835 6.8e-18 94.0 102 46.1
A03p08090 Brassica napus HOM05D005781 ORTHO05D006835 1.5e-17 92.8 95 47.4
Aa31LG11G12650 Aethionema arabicum HOM05D005781 ORTHO05D006835 3.4e-17 91.7 101 47.5
AT5G16950 Arabidopsis thaliana HOM05D005781 ORTHO05D006835 4.4e-17 91.3 104 46.2
BolC3t13430H Brassica oleracea HOM05D005781 ORTHO05D006835 4.4e-17 91.3 105 44.8
Actinidia11611 Actinidia chinensis HOM05D005781 ORTHO05D006835 5.8e-17 90.9 72 61.1
BraA03t10134Z Brassica rapa HOM05D005781 ORTHO05D006835 7.6e-17 90.5 104 45.2
Haze_11591 Corylus avellana HOM05D005781 ORTHO05D006835 7.6e-17 90.5 73 57.5
AL6G27950 Arabidopsis lyrata HOM05D005781 ORTHO05D006835 9.9e-17 90.1 102 46.1
C03p09360 Brassica napus HOM05D005781 ORTHO05D006835 1.7e-16 89.4 69 56.5
BcaB01g05237 Brassica carinata HOM05D005781 ORTHO05D006835 2.2e-16 89.0 107 43.0
Carub.0006s1516 Capsella rubella HOM05D005781 ORTHO05D006835 2.2e-16 89.0 74 52.7
Gohir.A05G276166 Gossypium hirsutum HOM05D005781 ORTHO05D006835 3.7e-16 88.2 86 51.2
CARHR196210 Cardamine hirsuta HOM05D005781 ORTHO05D006835 4.9e-16 87.8 103 44.7
HanXRQChr08g0228461 Helianthus annuus HOM05D005781 ORTHO05D006835 1.2e-14 83.2 58 65.5
SGA_v2.0_scaffold57G20299 Striga asiatica HOM05D005781 ORTHO05D006835 3.5e-14 81.6 80 52.5
SalBow1G0213 Salvia bowleyana HOM05D005781 ORTHO05D006835 6.0e-14 80.9 80 47.5
A09p11320 Brassica napus HOM05D005781 ORTHO05D006835 7.3e-12 73.9 87 40.2
BraA09t36770Z Brassica rapa HOM05D005781 ORTHO05D006835 7.3e-12 73.9 87 40.2
VMungo0251G3003 Vigna mungo HOM05D005781 ORTHO05D006835 9.6e-12 73.6 74 47.3
Zm00001eb217150 Zea mays HOM05D000360 ORTHO05D006835 3.6e-11 71.6 57 61.4
Pp3c9_710 Physcomitrium patens HOM05D005781 ORTHO05D006835 2.4e-10 68.9 53 50.9
Zm00001eb352440 Zea mays HOM05D000360 ORTHO05D006835 2.4e-10 68.9 57 59.6
Mapoly0010s0158 Marchantia polymorpha HOM05D005781 ORTHO05D006835 3.4e-09 65.1 60 48.3
BcaC04g22979 Brassica carinata HOM05D005781 ORTHO05D006835 1.3e-08 63.2 52 48.1
BcaB01g05235 Brassica carinata HOM05D005781 ORTHO05D006835 2.4e-07 58.9 43 60.5
C09p13330 Brassica napus HOM05D005781 ORTHO05D006835 2.7e-06 55.5 76 35.5
BolC9t54226H Brassica oleracea HOM05D005781 ORTHO05D006835 2.7e-06 55.5 76 35.5
Lalb_Chr07g0188641 Lupinus albus HOM05D005781 ORTHO05D006835 7.8e-06 53.9 49 46.9


User provided reference genes

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