Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400026019 Solanum tuberosum HOM05D006954 ORTHO05D008729 0.0e+00 1085.5 629 100.0
Sopen01g036590 Solanum pennellii HOM05D006954 ORTHO05D008729 5.6e-286 987.3 640 91.1
Solyc01g090850.3 Solanum lycopersicum HOM05D006954 ORTHO05D008729 2.3e-279 965.3 645 86.8
CAN.G1872.2 Capsicum annuum HOM05D006954 ORTHO05D008729 8.2e-213 744.2 677 71.2
Nitab4.5_0011151g0020 Nicotiana tabacum HOM05D006954 ORTHO05D008729 1.2e-182 644.0 710 60.1
Peaxi162Scf00803g00025 Petunia axillaris HOM05D006954 ORTHO05D008729 1.0e-170 604.4 489 72.0
Nitab4.5_0000859g0170 Nicotiana tabacum HOM05D006954 ORTHO05D008729 7.8e-155 551.6 620 59.0
Dinv43668 Davidia involucrata HOM05D006954 ORTHO05D008729 6.0e-70 269.6 626 36.4
Oeu031219.1 Olea europaea HOM05D006954 ORTHO05D008729 4.0e-66 256.9 367 48.2
Oeu009770.1 Olea europaea HOM05D006954 ORTHO05D008729 8.9e-66 255.8 532 41.7
Cfa011147 Carpinus fangiana HOM05D001088 ORTHO05D002099 2.7e-62 244.2 582 35.7
TWI59G0609 Tripterygium wilfordii HOM05D006954 ORTHO05D008729 3.3e-60 237.3 499 36.7
CiPaw.14G025200 Carya illinoinensis HOM05D006954 ORTHO05D008729 4.7e-59 233.4 316 45.6
Prupe.2G137000 Prunus persica HOM05D006954 ORTHO05D008729 4.7e-59 233.4 426 38.3
Haze_02712 Corylus avellana HOM05D006954 ORTHO05D008729 8.1e-59 232.6 473 37.4
FAN01G1544 Fragaria x ananassa HOM05D006954 ORTHO05D008729 4.0e-58 230.3 408 40.2
Atru.chr5.233 Acer truncatum HOM05D006954 ORTHO05D008729 2.0e-57 228.0 419 37.5
QL04p036098 Quercus lobata HOM05D006954 ORTHO05D008729 7.5e-57 226.1 473 38.1
FAN03G1627 Fragaria x ananassa HOM05D006954 ORTHO05D008729 4.9e-56 223.4 434 39.2
FAN06G0609 Fragaria x ananassa HOM05D006954 ORTHO05D008729 3.2e-55 220.7 404 39.9
MD07G1114400 Malus domestica HOM05D006954 ORTHO05D008729 3.2e-55 220.7 464 37.3
QL04p036448 Quercus lobata HOM05D006954 ORTHO05D008729 5.4e-55 219.9 466 38.4
MD02G1210900 Malus domestica HOM05D006954 ORTHO05D008729 1.2e-54 218.8 499 36.5
FAN10G2562 Fragaria x ananassa HOM05D006954 ORTHO05D008729 2.1e-54 218.0 407 38.8
FAN10G3525 Fragaria x ananassa HOM05D006954 ORTHO05D008729 6.0e-54 216.5 407 38.6
FAN06G1022 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.3e-53 215.3 404 39.4
QL04p036667 Quercus lobata HOM05D006954 ORTHO05D008729 3.0e-53 214.2 464 38.1
Gohir.A07G147000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 5.1e-53 213.4 439 37.4
Rhsim07G0031700 Rhododendron simsii HOM05D001088 ORTHO05D002099 1.9e-52 211.5 461 38.8
RcHm_v2.0_Chr1g0349021 Rosa chinensis HOM05D006954 ORTHO05D008729 1.6e-51 208.4 430 37.0
Thecc.01G384400 Theobroma cacao HOM05D006954 ORTHO05D008729 1.6e-51 208.4 657 31.1
Duzib133G0753 Durio zibethinus HOM05D006954 ORTHO05D008729 3.1e-50 204.1 599 32.6
Gohir.D07G153000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 5.2e-50 203.4 391 37.6
TAR375G0455 Trochodendron aralioides HOM05D006954 ORTHO05D008729 2.6e-49 201.1 404 34.4
Gorai.001G175100 Gossypium raimondii HOM05D006954 ORTHO05D008729 7.6e-49 199.5 429 36.6
COL.COLO4_12483 Corchorus olitorius HOM05D006954 ORTHO05D008729 1.3e-48 198.7 309 40.8
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 1.4e-47 195.3 462 34.4
Hma1.2p1_0041F.1_g025380 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 3.2e-47 194.1 443 35.7
TAR375G1092 Trochodendron aralioides HOM05D006954 ORTHO05D008729 9.2e-47 192.6 492 31.5
Ah.05g173790 Amaranthus hybridus HOM05D006954 ORTHO05D008729 2.1e-46 191.4 446 35.9
Dinv21639 Davidia involucrata HOM05D006954 ORTHO05D008729 5.6e-44 183.3 356 35.4
Glyma.11G167382 Glycine max HOM05D006954 ORTHO05D008729 1.8e-42 178.3 412 35.7
Hund17048 Selenicereus undatus HOM05D006954 ORTHO05D008729 1.8e-42 178.3 419 35.3
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 1.8e-42 178.3 471 34.2
AUR62013686 Chenopodium quinoa HOM05D006954 ORTHO05D008729 2.6e-41 174.5 270 41.9
QL12p012133 Quercus lobata HOM05D006954 ORTHO05D008729 4.4e-41 173.7 368 34.8
Rhsim07G0108500 Rhododendron simsii HOM05D001088 ORTHO05D002099 5.8e-41 173.3 373 34.0
EL10Ac1g00835 Beta vulgaris HOM05D006954 ORTHO05D008729 1.3e-40 172.2 424 35.8
Lalb_Chr07g0190311 Lupinus albus HOM05D006954 ORTHO05D008729 1.3e-40 172.2 446 36.1
SalBow5G1520 Salvia bowleyana HOM05D006954 ORTHO05D008729 1.7e-40 171.8 335 38.8
Lalb_Chr01g0021361 Lupinus albus HOM05D006954 ORTHO05D008729 5.4e-39 166.8 362 34.5
AUR62004161 Chenopodium quinoa HOM05D006954 ORTHO05D008729 2.7e-38 164.5 230 44.8
arahy.Tifrunner.gnm1.ann1.LN378K Arachis hypogaea HOM05D006954 ORTHO05D008729 4.6e-38 163.7 416 35.8
Phvul.010G071500 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 3.9e-37 160.6 464 33.4
Manes.01G080700 Manihot esculenta HOM05D006954 ORTHO05D008729 2.5e-36 157.9 408 32.6
PSO017G4363 Papaver somniferum HOM05D006954 ORTHO05D008729 2.5e-36 157.9 367 31.6
vmacro14083 Vaccinium macrocarpon HOM05D006954 ORTHO05D008729 3.3e-36 157.5 312 35.6
Ca_19859_v3 Cicer arietinum L. HOM05D006954 ORTHO05D008729 5.6e-36 156.8 407 33.9
arahy.Tifrunner.gnm1.ann1.UR8A7Q Arachis hypogaea HOM05D006954 ORTHO05D008729 1.3e-35 155.6 293 39.2
Aqoxy7G00762 Aquilegia oxysepala HOM05D006954 ORTHO05D008729 3.1e-34 151.0 323 34.1
Hma1.2p1_0316F.1_g123150 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 4.0e-34 150.6 314 35.0
Actinidia27466 Actinidia chinensis HOM05D001088 ORTHO05D002099 5.3e-34 150.2 440 32.0
PSO170G0413 Papaver somniferum HOM05D006954 ORTHO05D008729 9.0e-34 149.4 398 29.4
Sc02g0002800 Simmondsia chinensis HOM05D006954 ORTHO05D008729 1.5e-33 148.7 387 34.9
Glyma.01G134400 Glycine max HOM05D006954 ORTHO05D008729 2.6e-33 147.9 373 32.2
VMungo1383G2724 Vigna mungo HOM05D006954 ORTHO05D008729 1.3e-32 145.6 308 36.7
Oeu026406.1 Olea europaea HOM05D006954 ORTHO05D008729 2.9e-32 144.4 302 33.4
Ciclev10019520m.g Citrus clementina HOM05D006954 ORTHO05D008729 6.4e-32 143.3 519 30.4
PGR042G3906 Punica granatum HOM05D006954 ORTHO05D008729 4.2e-31 140.6 231 39.4
Glyma.03G033300 Glycine max HOM05D006954 ORTHO05D008729 2.1e-30 138.3 366 33.6
Lj3g0019070 Lotus japonicus HOM05D006954 ORTHO05D008729 1.3e-29 135.6 325 32.6
Phvul.008G143700 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 1.3e-29 135.6 472 31.4
Lj2A217G32 Lonicera japonica HOM05D006954 ORTHO05D008729 2.5e-28 131.3 264 34.1
Lj8P262T33 Lonicera japonica HOM05D006954 ORTHO05D008729 3.7e-27 127.5 301 34.9
DCAR_006832 Daucus carota HOM05D001088 ORTHO05D002099 4.8e-27 127.1 314 33.8
ECA233G0962 Erigeron canadensis HOM05D006954 ORTHO05D008729 1.8e-26 125.2 300 33.3
ECA236G3196 Erigeron canadensis HOM05D006954 ORTHO05D008729 5.3e-26 123.6 393 30.5
Lj6C70T9 Lonicera japonica HOM05D006954 ORTHO05D008729 6.9e-26 123.2 317 32.5
Psat0s3685g0160 Pisum sativum HOM05D006954 ORTHO05D008729 3.4e-25 120.9 500 28.2
HPP92_008568 Vanilla planifolia HOM05D006954 ORTHO05D008729 3.4e-25 120.9 307 29.3
Duzib136G0004 Durio zibethinus HOM05D006954 ORTHO05D008729 4.5e-25 120.6 343 29.7
Duzib205G0178 Durio zibethinus HOM05D006954 ORTHO05D008729 5.8e-25 120.2 334 30.2
SHI20280 Sapria himalayana HOM05D006954 ORTHO05D008729 9.9e-25 119.4 240 31.2
HanXRQChr06g0168891 Helianthus annuus HOM05D006954 ORTHO05D008729 1.7e-24 118.6 217 38.2
HanXRQChr06g0169051 Helianthus annuus HOM05D006954 ORTHO05D008729 1.7e-24 118.6 217 38.2
Lsat_1_v5_gn_7_8881 Lactuca sativa HOM05D006954 ORTHO05D008729 2.2e-24 118.2 445 31.0
TAR636G1544 Trochodendron aralioides HOM05D006954 ORTHO05D008729 4.9e-24 117.1 196 37.8
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 8.4e-24 116.3 376 30.1
SGA_v2.0_scaffold11G05525 Striga asiatica HOM05D006954 ORTHO05D008729 5.5e-23 113.6 270 32.2
HanXRQChr16g0511611 Helianthus annuus HOM05D006954 ORTHO05D008729 1.0e-21 109.4 291 30.2
Eucgr.E00424 Eucalyptus grandis HOM05D006954 ORTHO05D008729 6.7e-21 106.7 296 28.0
Lj9P565T15 Lonicera japonica HOM05D006954 ORTHO05D008729 9.6e-20 102.8 101 63.4
Prupe.5G069800 Prunus persica HOM05D006954 ORTHO05D008729 2.8e-19 101.3 368 28.0
CDE11G0492 Ceratophyllum demersum HOM05D006954 ORTHO05D008729 1.1e-18 99.4 318 27.4
arahy.Tifrunner.gnm1.ann1.ADMQ1S Arachis hypogaea HOM05D006954 ORTHO05D008729 1.4e-18 99.0 234 31.6
RcHm_v2.0_Chr7g0203321 Rosa chinensis HOM05D006954 ORTHO05D008729 6.9e-18 96.7 409 27.4
arahy.Tifrunner.gnm1.ann1.7WP6A4 Arachis hypogaea HOM05D006954 ORTHO05D008729 9.0e-18 96.3 229 30.1
FvH4_5g18930 Fragaria vesca HOM05D006954 ORTHO05D008729 5.8e-17 93.6 320 27.5
MBI04_g09501_MAGBIO Magnolia biondii HOM05D006954 ORTHO05D008729 1.0e-16 92.8 322 28.0
FAN13G0002 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.7e-16 92.0 318 26.7
FAN04G0536 Fragaria x ananassa HOM05D006954 ORTHO05D008729 2.9e-16 91.3 320 26.9
FAN18G2950 Fragaria x ananassa HOM05D006954 ORTHO05D008729 8.4e-16 89.7 320 27.5
Nitab4.5_0000618g0050 Nicotiana tabacum HOM05D020458 ORTHO05D022160 1.4e-15 89.0 258 29.5
QL04p036188 Quercus lobata HOM05D006954 ORTHO05D008729 4.6e-14 84.0 308 29.5
COL.COLO4_37173 Corchorus olitorius HOM05D006954 ORTHO05D008729 3.0e-13 81.3 319 26.0
Thecc.03G251300 Theobroma cacao HOM05D006954 ORTHO05D008729 1.1e-12 79.3 144 34.0
Nn6g33957 Nelumbo nucifera HOM05D006954 ORTHO05D008729 1.5e-12 79.0 118 39.8
Nitab4.5_0001076g0060 Nicotiana tabacum HOM05D020458 ORTHO05D022160 1.5e-12 79.0 359 27.6
Zm00001eb391500 Zea mays HOM05D006954 ORTHO05D008729 1.5e-12 79.0 276 26.8
Zm00001eb023500 Zea mays HOM05D006954 ORTHO05D008729 4.3e-12 77.4 250 26.0
ATR0317G083 Amborella trichopoda HOM05D006954 ORTHO05D008729 1.1e-10 72.8 320 27.5
CSS0002601 Camellia sinensis var. sinensis HOM05D005220 ORTHO05D006082 1.2e-09 69.3 213 25.8
Hma1.2p1_0481F.1_g161950 Hydrangea macrophylla HOM05D005220 ORTHO05D006082 2.0e-09 68.6 232 28.9
TAR629G0541 Trochodendron aralioides HOM05D005220 ORTHO05D006082 2.0e-09 68.6 333 25.5
CDE09G0910 Ceratophyllum demersum HOM05D006954 ORTHO05D008729 3.4e-09 67.8 289 26.0
Sc04g0003090 Simmondsia chinensis HOM05D005220 ORTHO05D006082 4.5e-09 67.4 227 29.1
Cc07_g04000 Coffea canephora HOM05D005220 ORTHO05D006082 7.7e-09 66.6 258 27.1
AUR62021593 Chenopodium quinoa HOM05D005220 ORTHO05D006082 1.3e-08 65.9 213 27.2
Sabra17G0080700 Salix brachista HOM05D005220 ORTHO05D006082 1.7e-08 65.5 190 29.5
MSTRG.3015 Avicennia marina HOM05D005220 ORTHO05D006082 2.9e-08 64.7 226 27.0
Actinidia07816 Actinidia chinensis HOM05D005220 ORTHO05D006082 3.8e-08 64.3 190 29.5
PGSC0003DMG400011881 Solanum tuberosum HOM05D020458 ORTHO05D022160 3.8e-08 64.3 75 38.7
Cfa019301 Carpinus fangiana HOM05D005220 ORTHO05D006082 5.0e-08 63.9 194 29.4
Ah.11g047990 Amaranthus hybridus HOM05D005220 ORTHO05D006082 6.5e-08 63.5 213 27.2
Potri.017G091700 Populus trichocarpa HOM05D005220 ORTHO05D006082 6.5e-08 63.5 220 25.9
Sopen06g020850 Solanum pennellii HOM05D020458 ORTHO05D022160 6.5e-08 63.5 91 39.6
Glyma.08G242800 Glycine max HOM05D005220 ORTHO05D006082 8.5e-08 63.2 194 27.3
TAR636G1204 Trochodendron aralioides HOM05D005220 ORTHO05D006082 8.5e-08 63.2 185 28.6
CDE10G0382 Ceratophyllum demersum HOM05D005220 ORTHO05D006082 1.1e-07 62.8 196 27.0
Hund02604 Selenicereus undatus HOM05D005220 ORTHO05D006082 1.1e-07 62.8 223 26.5
Solyc06g060730.3 Solanum lycopersicum HOM05D020458 ORTHO05D022160 1.1e-07 62.8 85 36.5
Lalb_Chr17g0337031 Lupinus albus HOM05D005220 ORTHO05D006082 1.4e-07 62.4 190 28.9
Oeu062150.1 Olea europaea HOM05D005220 ORTHO05D006082 3.2e-07 61.2 192 29.2
vmacro18154 Vaccinium macrocarpon HOM05D005220 ORTHO05D006082 3.2e-07 61.2 189 27.0
Actinidia01983 Actinidia chinensis HOM05D005220 ORTHO05D006082 4.2e-07 60.8 190 28.4
Dinv33817 Davidia involucrata HOM05D005220 ORTHO05D006082 4.2e-07 60.8 331 23.0
Actinidia22764 Actinidia chinensis HOM05D006954 ORTHO05D008729 5.5e-07 60.5 360 28.9
AUR62008499 Chenopodium quinoa HOM05D005220 ORTHO05D006082 5.5e-07 60.5 213 26.8
Haze_14458 Corylus avellana HOM05D005220 ORTHO05D006082 5.5e-07 60.5 198 28.3
Sed0003803 Sechium edule HOM05D005220 ORTHO05D006082 5.5e-07 60.5 200 26.0
Glyma.18G265000 Glycine max HOM05D005220 ORTHO05D006082 7.2e-07 60.1 205 26.8
Cfa007639 Carpinus fangiana HOM05D005220 ORTHO05D006082 1.2e-06 59.3 190 32.1
CiPaw.11G050100 Carya illinoinensis HOM05D005220 ORTHO05D006082 1.2e-06 59.3 190 26.8
Phvul.008G035000 Phaseolus vulgaris HOM05D005220 ORTHO05D006082 1.2e-06 59.3 190 27.9
Hund02603 Selenicereus undatus HOM05D005220 ORTHO05D006082 1.6e-06 58.9 203 29.1
Lsat_1_v5_gn_2_87740 Lactuca sativa HOM05D005220 ORTHO05D006082 2.7e-06 58.2 190 28.4
Lj1g0005307 Lotus japonicus HOM05D005220 ORTHO05D006082 2.7e-06 58.2 207 28.0
Prupe.5G201200 Prunus persica HOM05D005220 ORTHO05D006082 2.7e-06 58.2 202 25.2
TAR374G0076 Trochodendron aralioides HOM05D005220 ORTHO05D006082 2.7e-06 58.2 214 24.3
VMungo1383G2795 Vigna mungo HOM05D005220 ORTHO05D006082 3.6e-06 57.8 234 25.2
Sc10g0003210 Simmondsia chinensis HOM05D005220 ORTHO05D006082 4.6e-06 57.4 192 28.6
Nn3g17397 Nelumbo nucifera HOM05D005220 ORTHO05D006082 6.1e-06 57.0 337 24.9
PSO017G3052 Papaver somniferum HOM05D005220 ORTHO05D006082 6.1e-06 57.0 190 26.3
Thecc.03G097300 Theobroma cacao HOM05D005220 ORTHO05D006082 6.1e-06 57.0 198 27.3
TWI34G1812 Tripterygium wilfordii HOM05D005220 ORTHO05D006082 6.1e-06 57.0 190 26.8


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