Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 2.0e-121 439.1 225 100.0
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 2.4e-114 415.6 225 96.0
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 3.1e-114 415.2 225 96.4
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 1.5e-103 379.8 225 86.7
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 3.7e-99 365.2 225 84.9
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 1.6e-97 359.8 207 88.9
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 2.8e-86 322.4 224 77.2
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 4.4e-76 288.5 187 75.4
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 1.7e-75 286.6 193 72.5
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.4e-74 282.7 221 67.4
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 3.2e-74 282.3 196 73.5
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.6e-73 280.0 196 73.0
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.6e-73 280.0 193 72.0
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.1e-73 279.6 196 73.0
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 2.1e-73 279.6 196 72.4
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.7e-73 279.3 196 72.4
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 2.7e-73 279.3 219 63.5
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 7.8e-73 277.7 191 71.7
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 1.3e-72 276.9 189 73.0
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 5.1e-72 275.0 219 63.9
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 6.6e-72 274.6 196 73.5
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 8.6e-72 274.2 191 70.2
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 1.5e-71 273.5 191 70.2
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 1.9e-71 273.1 191 70.2
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 2.5e-71 272.7 184 73.4
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 2.5e-71 272.7 191 70.2
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 2.5e-71 272.7 226 61.1
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 3.3e-71 272.3 184 73.4
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 3.3e-71 272.3 200 68.0
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 3.3e-71 272.3 200 68.0
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 4.3e-71 271.9 212 66.5
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 7.3e-71 271.2 176 76.7
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 7.3e-71 271.2 191 69.6
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 7.3e-71 271.2 189 71.4
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 9.6e-71 270.8 188 70.7
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 9.6e-71 270.8 187 69.5
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 1.2e-70 270.4 193 69.9
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 1.6e-70 270.0 182 72.0
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 1.6e-70 270.0 186 71.0
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 4.7e-70 268.5 208 65.4
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 6.2e-70 268.1 193 67.4
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 6.2e-70 268.1 207 65.2
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 2.4e-69 266.2 191 70.7
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 2.4e-69 266.2 200 68.0
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 4.0e-69 265.4 198 68.2
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 4.0e-69 265.4 183 70.5
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 5.2e-69 265.0 179 73.2
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 6.8e-69 264.6 193 70.5
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 1.2e-68 263.8 184 71.2
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 1.2e-68 263.8 182 73.1
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 1.5e-68 263.5 195 67.2
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 1.5e-68 263.5 205 63.4
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 2.6e-68 262.7 191 71.2
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 5.8e-68 261.5 184 70.7
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 1.7e-67 260.0 221 61.1
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 3.8e-67 258.8 191 66.0
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 3.8e-67 258.8 183 69.9
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 8.4e-67 257.7 194 66.0
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 1.4e-66 256.9 185 67.0
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 1.4e-66 256.9 184 68.5
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 1.4e-66 256.9 189 67.2
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 1.9e-66 256.5 213 60.6
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 2.4e-66 256.1 185 67.0
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 2.4e-66 256.1 193 64.2
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 3.2e-66 255.8 187 67.9
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 5.4e-66 255.0 185 66.5
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 7.1e-66 254.6 185 65.9
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 1.2e-65 253.8 226 58.4
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 2.1e-65 253.1 180 70.0
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 2.7e-65 252.7 176 69.3
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 6.0e-65 251.5 199 64.8
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 1.0e-64 250.8 188 63.3
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 1.0e-64 250.8 185 65.9
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 1.3e-64 250.4 193 65.8
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 1.7e-64 250.0 189 63.5
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 2.3e-64 249.6 183 64.5
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 3.9e-64 248.8 185 65.4
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 6.6e-64 248.1 186 62.9
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 8.1e-62 241.1 225 56.9
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 1.8e-61 240.0 174 68.4
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 2.0e-60 236.5 174 67.2
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 7.6e-60 234.6 191 63.4
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 3.2e-58 229.2 195 66.7
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 4.6e-57 225.3 194 60.8
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 5.6e-55 218.4 220 55.9
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 4.8e-54 215.3 290 44.1
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 1.8e-53 213.4 196 57.7
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 6.9e-53 211.5 131 77.1
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 9.9e-52 207.6 206 57.8
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 6.4e-51 204.9 204 57.4
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 2.1e-49 199.9 132 75.8
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 3.9e-48 195.7 138 71.0
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 8.7e-48 194.5 128 72.7
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 3.3e-47 192.6 129 71.3
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 6.2e-46 188.3 145 67.6
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.4e-45 187.2 127 71.7
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 3.1e-45 186.0 204 52.0
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 9.0e-45 184.5 142 60.6
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 1.2e-41 174.1 116 75.0
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 1.6e-41 173.7 116 74.1
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 6.0e-41 171.8 112 77.7
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 2.3e-40 169.9 109 79.8
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 1.5e-39 167.2 175 52.0
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 1.1e-37 161.0 176 50.6
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.4e-37 160.6 112 75.0
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 9.3e-34 147.9 170 47.1
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.6e-33 147.1 106 67.0
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 7.9e-33 144.8 129 58.9
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 3.3e-31 139.4 97 71.1
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 3.8e-27 125.9 176 43.8
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 2.0e-23 113.6 91 59.3
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 3.7e-22 109.4 133 45.9
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 5.1e-16 89.0 160 36.2
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 6.7e-16 88.6 71 62.0
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 8.8e-16 88.2 49 79.6
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 1.5e-15 87.4 63 65.1
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 1.3e-11 74.3 73 52.1
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 3.8e-11 72.8 48 72.9
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 1.1e-10 71.2 67 56.7
MELO3C033920.2 Cucumis melo HOM05D006638 ORTHO05D008246 2.3e-08 63.5 101 38.6
RcHm_v2.0_Chr1g0349061 Rosa chinensis HOM05D006638 ORTHO05D008246 6.3e-06 55.5 44 59.1


User provided reference genes

Program Settings