Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 3.5e-39 164.5 81 100.0
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 4.7e-28 127.5 75 82.7
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 2.0e-26 122.1 76 78.9
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.3e-25 119.4 77 74.0
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 6.4e-25 117.1 76 73.7
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 6.4e-25 117.1 76 73.7
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.1e-24 116.3 77 72.7
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 5.4e-24 114.0 76 72.4
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 1.2e-23 112.8 76 71.1
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 1.6e-23 112.5 76 69.7
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 1.6e-23 112.5 76 69.7
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 2.0e-23 112.1 76 71.1
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 3.5e-23 111.3 76 71.1
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 5.9e-23 110.5 76 68.4
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 1.0e-22 109.8 77 66.2
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 1.7e-22 109.0 77 68.8
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 1.7e-22 109.0 76 68.4
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 1.7e-22 109.0 76 67.1
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 3.9e-22 107.8 86 65.1
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 8.6e-22 106.7 76 65.8
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.5e-21 105.9 77 64.9
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 2.5e-21 105.1 75 65.3
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 3.3e-21 104.8 75 68.0
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 4.3e-21 104.4 76 65.8
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 4.3e-21 104.4 77 68.8
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 4.3e-21 104.4 76 64.5
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 4.3e-21 104.4 76 64.5
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 5.6e-21 104.0 76 64.5
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 7.3e-21 103.6 78 65.4
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 7.3e-21 103.6 76 69.7
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 7.3e-21 103.6 76 64.5
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 7.3e-21 103.6 76 64.5
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 7.3e-21 103.6 75 64.0
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 9.5e-21 103.2 75 64.0
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 1.2e-20 102.8 76 63.2
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 1.2e-20 102.8 76 63.2
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 1.6e-20 102.4 75 61.3
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 1.6e-20 102.4 76 63.2
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 1.6e-20 102.4 75 64.0
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 1.6e-20 102.4 76 63.2
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 2.1e-20 102.1 76 64.5
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 2.1e-20 102.1 76 64.5
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 2.8e-20 101.7 76 63.2
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 2.8e-20 101.7 76 63.2
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 2.8e-20 101.7 75 65.3
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 2.8e-20 101.7 76 61.8
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 3.6e-20 101.3 78 65.4
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 3.6e-20 101.3 75 60.0
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 3.6e-20 101.3 75 62.7
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 3.6e-20 101.3 76 64.5
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 3.6e-20 101.3 76 63.2
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.6e-20 101.3 76 63.2
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 3.6e-20 101.3 75 61.3
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 3.6e-20 101.3 76 63.2
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 4.7e-20 100.9 76 65.8
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 4.7e-20 100.9 76 63.2
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 6.2e-20 100.5 76 61.8
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 6.2e-20 100.5 76 61.8
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 6.2e-20 100.5 77 63.6
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 8.0e-20 100.1 75 64.0
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 8.0e-20 100.1 76 63.2
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 1.1e-19 99.8 75 68.0
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 1.1e-19 99.8 76 64.5
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 1.1e-19 99.8 76 65.8
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 1.4e-19 99.4 75 62.7
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 1.8e-19 99.0 76 64.5
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 1.8e-19 99.0 75 61.3
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 1.8e-19 99.0 76 59.2
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 3.1e-19 98.2 75 61.3
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 3.1e-19 98.2 76 63.2
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 4.0e-19 97.8 76 61.8
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 4.0e-19 97.8 76 60.5
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 1.2e-18 96.3 75 61.3
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 1.5e-18 95.9 76 57.9
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 1.5e-18 95.9 75 60.0
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 2.0e-18 95.5 76 60.5
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 2.0e-18 95.5 75 57.3
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 2.6e-18 95.1 76 57.9
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 4.4e-18 94.4 75 58.7
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 7.5e-18 93.6 76 56.6
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 1.3e-17 92.8 75 61.3
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 1.7e-17 92.4 75 60.0
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 1.7e-17 92.4 75 58.7
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 2.2e-17 92.0 76 59.2
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 3.7e-17 91.3 76 52.6
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 6.4e-17 90.5 64 68.8
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 5.4e-16 87.4 72 58.3
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 9.2e-16 86.7 69 63.8
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 2.0e-15 85.5 76 55.3
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 2.7e-15 85.1 73 56.2
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 7.8e-15 83.6 78 59.0
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.9e-14 81.3 61 65.6
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 6.6e-14 80.5 48 85.4
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.3e-11 72.0 48 72.9
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.3e-11 72.0 48 72.9
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 4.0e-11 71.2 72 52.8
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.5e-10 69.3 48 70.8
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 9.9e-10 66.6 63 50.8
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 1.9e-08 62.4 35 80.0
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 6.0e-07 57.4 34 76.5


User provided reference genes

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