Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400025657 Solanum tuberosum HOM05D004848 ORTHO05D006859 2.0e-25 118.2 56 100.0
Solyc04g014960.4 Solanum lycopersicum HOM05D004848 ORTHO05D006859 4.4e-25 117.1 56 98.2
Sopen02g017950 Solanum pennellii HOM05D004848 ORTHO05D006859 2.8e-24 114.4 56 96.4
Solyc02g068790.4 Solanum lycopersicum HOM05D004848 ORTHO05D006859 8.3e-24 112.8 56 94.6
CAN.G149.35 Capsicum annuum HOM05D004848 ORTHO05D006859 7.0e-23 109.8 56 91.1
Nitab4.5_0001288g0250 Nicotiana tabacum HOM05D004848 ORTHO05D006859 2.5e-20 101.3 55 85.5
Nitab4.5_0004246g0030 Nicotiana tabacum HOM05D004848 ORTHO05D006859 9.5e-20 99.4 55 83.6
Nitab4.5_0000818g0090 Nicotiana tabacum HOM05D004848 ORTHO05D006859 2.8e-19 97.8 55 81.8
Peaxi162Scf00149g00052 Petunia axillaris HOM05D004848 ORTHO05D006859 4.7e-19 97.1 55 81.8
RcHm_v2.0_Chr5g0020101 Rosa chinensis HOM05D004848 ORTHO05D006859 7.0e-15 83.2 55 65.5
Dinv25911 Davidia involucrata HOM05D004848 ORTHO05D006859 1.2e-14 82.4 55 67.3
COL.COLO4_30993 Corchorus olitorius HOM05D004848 ORTHO05D006859 1.6e-14 82.0 55 65.5
Prupe.4G112000 Prunus persica HOM05D004848 ORTHO05D006859 2.0e-14 81.6 55 65.5
Actinidia22396 Actinidia chinensis HOM05D004848 ORTHO05D006859 2.7e-14 81.3 55 65.5
FvH4_3g12290 Fragaria vesca HOM05D004848 ORTHO05D006859 2.7e-14 81.3 55 63.6
MD10G1232500 Malus domestica HOM05D004848 ORTHO05D006859 2.7e-14 81.3 55 65.5
FAN25G0040 Fragaria x ananassa HOM05D004848 ORTHO05D006859 3.5e-14 80.9 55 63.6
GSVIVG01012068001 Vitis vinifera HOM05D004848 ORTHO05D006859 7.8e-14 79.7 52 65.4
CiPaw.10G064700 Carya illinoinensis HOM05D004848 ORTHO05D006859 1.0e-13 79.3 55 65.5
FAN21G0923 Fragaria x ananassa HOM05D004848 ORTHO05D006859 1.0e-13 79.3 55 63.6
HanXRQChr14g0447411 Helianthus annuus HOM05D004848 ORTHO05D006859 1.0e-13 79.3 55 63.6
Thecc.06G143000 Theobroma cacao HOM05D004848 ORTHO05D006859 1.0e-13 79.3 55 63.6
Psat7g130520 Pisum sativum HOM05D004848 ORTHO05D006859 1.3e-13 79.0 55 61.8
FAN16G1950 Fragaria x ananassa HOM05D004848 ORTHO05D006859 1.7e-13 78.6 55 61.8
Lj4g0026898 Lotus japonicus HOM05D004848 ORTHO05D006859 2.3e-13 78.2 55 60.0
TAR371G0760 Trochodendron aralioides HOM05D004848 ORTHO05D006859 2.3e-13 78.2 55 63.6
DCAR_007788 Daucus carota HOM05D004848 ORTHO05D006859 3.0e-13 77.8 54 63.0
Lj1A1145G19 Lonicera japonica HOM05D004848 ORTHO05D006859 3.0e-13 77.8 55 65.5
PSO675G2729 Papaver somniferum HOM05D004848 ORTHO05D006859 3.0e-13 77.8 55 60.0
Sabra15G0138300 Salix brachista HOM05D004848 ORTHO05D006859 3.0e-13 77.8 55 61.8
ATR0763G002 Amborella trichopoda HOM05D004848 ORTHO05D006859 3.9e-13 77.4 55 60.0
Oeu056030.1 Olea europaea HOM05D004848 ORTHO05D006859 3.9e-13 77.4 55 60.0
Duzib160G0177 Durio zibethinus HOM05D004848 ORTHO05D006859 5.0e-13 77.0 55 61.8
MD05G1251700 Malus domestica HOM05D004848 ORTHO05D006859 6.6e-13 76.6 55 58.2
PSO541G1718 Papaver somniferum HOM05D004848 ORTHO05D006859 6.6e-13 76.6 55 60.0
BcaC01g00643 Brassica carinata HOM05D004848 ORTHO05D006859 8.6e-13 76.3 55 58.2
A08p14580 Brassica napus HOM05D004848 ORTHO05D006859 8.6e-13 76.3 55 58.2
C03p82150 Brassica napus HOM05D004848 ORTHO05D006859 8.6e-13 76.3 55 58.2
BolC3t20538H Brassica oleracea HOM05D004848 ORTHO05D006859 8.6e-13 76.3 55 58.2
BraA08t33444Z Brassica rapa HOM05D004848 ORTHO05D006859 8.6e-13 76.3 55 58.2
MBI18_g11477_MAGBIO Magnolia biondii HOM05D004848 ORTHO05D006859 8.6e-13 76.3 55 60.0
PGR042G2559 Punica granatum HOM05D004848 ORTHO05D006859 8.6e-13 76.3 55 63.6
Gohir.A05G145600 Gossypium hirsutum HOM05D004848 ORTHO05D006859 1.1e-12 75.9 55 61.8
Gohir.D05G148000 Gossypium hirsutum HOM05D004848 ORTHO05D006859 1.1e-12 75.9 55 61.8
Gorai.009G152200 Gossypium raimondii HOM05D004848 ORTHO05D006859 1.1e-12 75.9 55 61.8
QL11p016422 Quercus lobata HOM05D004848 ORTHO05D006859 1.1e-12 75.9 54 59.3
TPR.G20986 Trifolium pratense HOM05D004848 ORTHO05D006859 1.5e-12 75.5 55 61.8
ECA238G4765 Erigeron canadensis HOM05D004848 ORTHO05D006859 2.5e-12 74.7 55 60.0
Hund22216 Selenicereus undatus HOM05D004848 ORTHO05D006859 2.5e-12 74.7 54 59.3
BcaB03g11645 Brassica carinata HOM05D004848 ORTHO05D006859 3.3e-12 74.3 55 54.5
Nn7g38150 Nelumbo nucifera HOM05D004848 ORTHO05D006859 3.3e-12 74.3 55 60.0
Cfa000710 Carpinus fangiana HOM05D004848 ORTHO05D006859 4.3e-12 73.9 55 58.2
Thhalv10024627m.g Eutrema salsugineum HOM05D004848 ORTHO05D006859 4.3e-12 73.9 55 54.5
Lalb_Chr16g0385221 Lupinus albus HOM05D004848 ORTHO05D006859 4.3e-12 73.9 55 56.4
CSS0017265 Camellia sinensis var. sinensis HOM05D004848 ORTHO05D006859 5.6e-12 73.6 55 56.4
CANSAT35G1894 Cannabis sativa HOM05D004848 ORTHO05D006859 5.6e-12 73.6 55 60.0
Migut.M01981 Erythranthe guttata HOM05D004848 ORTHO05D006859 5.6e-12 73.6 55 60.0
Medtr4g084060 Medicago truncatula HOM05D004848 ORTHO05D006859 5.6e-12 73.6 55 58.2
ClCG01G025720 Citrullus lanatus HOM05D004848 ORTHO05D006859 7.3e-12 73.2 53 56.6
CARHR226680 Cardamine hirsuta HOM05D004848 ORTHO05D006859 9.5e-12 72.8 55 52.7
SGA_v2.0_scaffold175G39362 Striga asiatica HOM05D004848 ORTHO05D006859 9.5e-12 72.8 55 58.2
TWI38G1208 Tripterygium wilfordii HOM05D004848 ORTHO05D006859 1.2e-11 72.4 55 56.4
Glyma.20G020100 Glycine max HOM05D004848 ORTHO05D006859 1.6e-11 72.0 52 53.8
Cc09_g06070 Coffea canephora HOM05D004848 ORTHO05D006859 2.1e-11 71.6 55 56.4
MELO3C007013.2 Cucumis melo HOM05D004848 ORTHO05D006859 2.1e-11 71.6 54 55.6
CsaV3_6G052960 Cucumis sativus L. HOM05D004848 ORTHO05D006859 2.1e-11 71.6 54 55.6
arahy.Tifrunner.gnm1.ann1.4Z5NYX Arachis hypogaea HOM05D004848 ORTHO05D006859 2.8e-11 71.2 55 58.2
Ca_18763_v3 Cicer arietinum L. HOM05D004848 ORTHO05D006859 2.8e-11 71.2 54 55.6
Manes.16G057700 Manihot esculenta HOM05D004848 ORTHO05D006859 2.8e-11 71.2 55 54.5
vmacro03521 Vaccinium macrocarpon HOM05D004848 ORTHO05D006859 2.8e-11 71.2 55 54.5
Atru.chr10.533 Acer truncatum HOM05D004848 ORTHO05D006859 3.6e-11 70.9 55 60.0
Atru.chr10.537 Acer truncatum HOM05D004848 ORTHO05D006859 3.6e-11 70.9 55 60.0
AT4G19900 Arabidopsis thaliana HOM05D004848 ORTHO05D006859 3.6e-11 70.9 56 50.0
arahy.Tifrunner.gnm1.ann1.84J3B2 Arachis hypogaea HOM05D004848 ORTHO05D006859 3.6e-11 70.9 55 56.4
Carub.0007s2131 Capsella rubella HOM05D004848 ORTHO05D006859 4.7e-11 70.5 55 50.9
AL7G34080 Arabidopsis lyrata HOM05D004848 ORTHO05D006859 6.2e-11 70.1 56 51.8
Phvul.002G098100 Phaseolus vulgaris HOM05D004848 ORTHO05D006859 6.2e-11 70.1 55 52.7
Sed0003868 Sechium edule HOM05D004848 ORTHO05D006859 8.0e-11 69.7 53 56.6
VMungo0251G2797 Vigna mungo HOM05D004848 ORTHO05D006859 8.0e-11 69.7 55 52.7
MSTRG.13293 Avicennia marina HOM05D004848 ORTHO05D006859 1.1e-10 69.3 55 54.5
SalBow6G5406 Salvia bowleyana HOM05D004848 ORTHO05D006859 1.1e-10 69.3 55 52.7
SalBow8G3445 Salvia bowleyana HOM05D004848 ORTHO05D006859 1.1e-10 69.3 55 52.7
THA.LOC104806215 Tarenaya hassleriana HOM05D004848 ORTHO05D006859 1.1e-10 69.3 55 50.9
Zm00001eb324590 Zea mays HOM05D004848 ORTHO05D006859 1.1e-10 69.3 53 52.8
Ciclev10014513m.g Citrus clementina HOM05D004848 ORTHO05D006859 4.0e-10 67.4 55 54.5
Aqoxy1G01449 Aquilegia oxysepala HOM05D004848 ORTHO05D006859 5.2e-10 67.0 55 52.7
Cpa.g.sc135.8 Carica papaya HOM05D004848 ORTHO05D006859 1.2e-09 65.9 55 52.7
Mapoly0045s0054 Marchantia polymorpha HOM05D004848 ORTHO05D006859 1.2e-09 65.9 55 50.9
EL10Ac5g12737 Beta vulgaris HOM05D004848 ORTHO05D006859 1.5e-09 65.5 55 54.5
Lsat_1_v5_gn_2_63860 Lactuca sativa HOM05D004848 ORTHO05D006859 2.6e-09 64.7 55 49.1
Sc12g0008200 Simmondsia chinensis HOM05D004848 ORTHO05D006859 2.6e-09 64.7 55 49.1
Os07g0567300 Oryza sativa ssp. japonica HOM05D004848 ORTHO05D006859 3.4e-09 64.3 53 49.1
HPP92_015950 Vanilla planifolia HOM05D004848 ORTHO05D006859 4.4e-09 63.9 53 54.7
Glyma.07G221700 Glycine max HOM05D004848 ORTHO05D006859 7.5e-09 63.2 52 48.1
AUR62022464 Chenopodium quinoa HOM05D004848 ORTHO05D006859 9.8e-09 62.8 55 50.9
unitig_21.g20196 Utricularia gibba HOM05D004848 ORTHO05D006859 1.7e-08 62.0 42 64.3
CDE02G3340 Ceratophyllum demersum HOM05D004848 ORTHO05D006859 2.9e-08 61.2 42 54.8
Lsat_1_v5_gn_4_63080 Lactuca sativa HOM05D004848 ORTHO05D006859 2.9e-08 61.2 55 45.5
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 1.1e-07 59.3 45 55.6
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 3.2e-07 57.8 47 46.8
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 7.0e-07 56.6 44 54.5
Pp3c24_4230 Physcomitrium patens HOM05D004848 ORTHO05D006859 9.2e-07 56.2 53 47.2
AagrBONN_evm.TU.Sc2ySwM_344.2562 Anthoceros agrestis HOM05D004848 ORTHO05D006859 2.1e-06 55.1 53 43.4
Pp3c16_9070 Physcomitrium patens HOM05D004848 ORTHO05D001608 6.0e-06 53.5 53 45.3


User provided reference genes

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