Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400025561 Solanum tuberosum HOM05D005030 ORTHO05D006490 9.7e-147 523.5 266 100.0
Sopen11g001650 Solanum pennellii HOM05D005030 ORTHO05D006490 1.4e-140 503.1 266 95.9
CAN.G802.6 Capsicum annuum HOM05D005030 ORTHO05D006490 4.2e-118 428.3 275 81.5
Peaxi162Scf00012g02419 Petunia axillaris HOM05D005030 ORTHO05D006490 1.2e-109 400.2 275 77.8
Nitab4.5_0003048g0010 Nicotiana tabacum HOM05D005030 ORTHO05D006490 2.1e-109 399.4 270 77.8
Nitab4.5_0002909g0070 Nicotiana tabacum HOM05D005030 ORTHO05D006490 2.0e-104 382.9 260 78.1
Dinv24313 Davidia involucrata HOM05D005030 ORTHO05D006490 2.7e-64 249.6 272 50.7
Dinv05712 Davidia involucrata HOM05D005030 ORTHO05D006490 1.1e-62 244.2 272 51.5
Cc08_g02710 Coffea canephora HOM05D005030 ORTHO05D006490 1.7e-58 230.3 273 49.5
Oeu037792.2 Olea europaea HOM05D005030 ORTHO05D006490 8.4e-58 228.0 273 47.6
Cpa.g.sc42.108 Carica papaya HOM05D005030 ORTHO05D006490 1.1e-57 227.6 259 45.6
Actinidia06653 Actinidia chinensis HOM05D005030 ORTHO05D006490 9.3e-57 224.6 273 46.2
Lj2A602G37 Lonicera japonica HOM05D005030 ORTHO05D006490 3.5e-56 222.6 269 46.5
Atru.chr4.774 Acer truncatum HOM05D005030 ORTHO05D006490 2.3e-55 219.9 269 45.7
GSVIVG01026545001 Vitis vinifera HOM05D005030 ORTHO05D006490 3.9e-55 219.2 274 46.0
Duzib147G1675 Durio zibethinus HOM05D005030 ORTHO05D006490 5.6e-54 215.3 272 46.0
Ciclev10024723m.g Citrus clementina HOM05D005030 ORTHO05D006490 7.4e-54 214.9 269 45.4
Potri.007G110800 Populus trichocarpa HOM05D005030 ORTHO05D006490 9.6e-54 214.5 269 43.9
Cc07_g17780 Coffea canephora HOM05D005030 ORTHO05D006490 2.4e-52 209.9 271 45.4
DCAR_001349 Daucus carota HOM05D005030 ORTHO05D006490 3.1e-52 209.5 274 43.8
Sabra07G0090700 Salix brachista HOM05D005030 ORTHO05D006490 4.0e-52 209.1 265 43.4
Haze_25135 Corylus avellana HOM05D005030 ORTHO05D006490 6.9e-52 208.4 257 43.6
vmacro12845 Vaccinium macrocarpon HOM05D005030 ORTHO05D006490 6.9e-52 208.4 266 44.4
Thecc.01G124600 Theobroma cacao HOM05D005030 ORTHO05D006490 5.8e-51 205.3 271 42.8
COL.COLO4_13999 Corchorus olitorius HOM05D005030 ORTHO05D006490 7.6e-51 204.9 274 44.2
Cfa002838 Carpinus fangiana HOM05D005030 ORTHO05D006490 9.9e-51 204.5 260 42.7
Gohir.A11G230400 Gossypium hirsutum HOM05D005030 ORTHO05D006490 2.9e-50 203.0 269 43.5
Gohir.D11G232200 Gossypium hirsutum HOM05D005030 ORTHO05D006490 4.9e-50 202.2 269 43.5
Gorai.002G151400 Gossypium raimondii HOM05D005030 ORTHO05D006490 8.4e-50 201.4 269 43.5
Eucgr.H04934 Eucalyptus grandis HOM05D005030 ORTHO05D006490 5.5e-49 198.7 267 45.3
MD09G1255500 Malus domestica HOM05D005030 ORTHO05D006490 5.5e-49 198.7 263 43.7
RcHm_v2.0_Chr2g0120111 Rosa chinensis HOM05D005030 ORTHO05D006490 5.5e-49 198.7 271 44.3
CANSAT01G2434 Cannabis sativa HOM05D005030 ORTHO05D006490 6.0e-48 195.3 261 43.7
FAN23G1259 Fragaria x ananassa HOM05D005030 ORTHO05D006490 6.0e-48 195.3 274 44.9
FAN19G2772 Fragaria x ananassa HOM05D005030 ORTHO05D006490 1.0e-47 194.5 267 44.2
FAN28G1848 Fragaria x ananassa HOM05D005030 ORTHO05D006490 2.3e-47 193.4 274 43.8
Rhsim10G0138800 Rhododendron simsii HOM05D005030 ORTHO05D006490 2.3e-47 193.4 267 44.2
FAN26G2615 Fragaria x ananassa HOM05D005030 ORTHO05D006490 8.7e-47 191.4 268 44.4
Nn5g28681 Nelumbo nucifera HOM05D005030 ORTHO05D006490 8.7e-47 191.4 271 42.1
FvH4_1g23980 Fragaria vesca HOM05D005030 ORTHO05D006490 1.1e-46 191.0 268 43.7
MBI18_g25945_MAGBIO Magnolia biondii HOM05D005030 ORTHO05D006490 2.5e-46 189.9 268 42.2
TWI31G0652 Tripterygium wilfordii HOM05D005030 ORTHO05D006490 3.3e-46 189.5 272 39.0
Migut.H01102 Erythranthe guttata HOM05D005030 ORTHO05D006490 9.6e-46 188.0 271 40.2
Prupe.3G147500 Prunus persica HOM05D005030 ORTHO05D006490 6.2e-45 185.3 256 42.2
Aqoxy5G02153 Aquilegia oxysepala HOM05D005030 ORTHO05D006490 6.9e-44 181.8 273 39.9
Lalb_Chr13g0296501 Lupinus albus HOM05D005030 ORTHO05D006490 1.2e-43 181.0 269 41.6
TPR.G37387 Trifolium pratense HOM05D005030 ORTHO05D006490 1.5e-43 180.6 259 42.9
MSTRG.2677 Avicennia marina HOM05D005030 ORTHO05D006490 2.0e-43 180.3 278 41.0
Ca_17653_v3 Cicer arietinum L. HOM05D005030 ORTHO05D006490 4.5e-43 179.1 268 41.4
Sed0011527 Sechium edule HOM05D005030 ORTHO05D006490 4.5e-43 179.1 274 38.0
CSS0019451 Camellia sinensis var. sinensis HOM05D005030 ORTHO05D006490 5.8e-43 178.7 355 37.2
Glyma.08G147000 Glycine max HOM05D005030 ORTHO05D006490 7.6e-43 178.3 272 42.3
ClCG01G015590 Citrullus lanatus HOM05D005030 ORTHO05D006490 1.0e-42 177.9 271 38.0
Lalb_Chr12g0203281 Lupinus albus HOM05D005030 ORTHO05D006490 1.3e-42 177.6 269 39.4
Psat7g048200 Pisum sativum HOM05D005030 ORTHO05D006490 1.7e-42 177.2 271 42.8
Sc03g0005100 Simmondsia chinensis HOM05D005030 ORTHO05D006490 2.2e-42 176.8 267 40.8
unitig_0.g2514 Utricularia gibba HOM05D005030 ORTHO05D006490 2.2e-42 176.8 271 40.6
Medtr8g093100 Medicago truncatula HOM05D005030 ORTHO05D006490 2.9e-42 176.4 258 40.7
Hund04465 Selenicereus undatus HOM05D005030 ORTHO05D006490 6.5e-42 175.3 282 37.2
Aa31LG8G5540 Aethionema arabicum HOM05D005030 ORTHO05D006490 8.4e-42 174.9 258 39.1
Lj4g0022240 Lotus japonicus HOM05D005030 ORTHO05D006490 1.4e-41 174.1 270 40.7
Phvul.002G270100 Phaseolus vulgaris HOM05D005030 ORTHO05D006490 2.5e-41 173.3 271 40.6
Glyma.05G189400 Glycine max HOM05D005030 ORTHO05D006490 3.2e-41 172.9 268 38.8
VMungo0251G0340 Vigna mungo HOM05D005030 ORTHO05D006490 3.2e-41 172.9 271 40.6
AUR62003613 Chenopodium quinoa HOM05D005030 ORTHO05D006490 5.5e-41 172.2 264 39.0
arahy.Tifrunner.gnm1.ann1.HR53B8 Arachis hypogaea HOM05D005030 ORTHO05D006490 7.1e-41 171.8 255 40.4
BcaB06g25924 Brassica carinata HOM05D005030 ORTHO05D006490 7.1e-41 171.8 271 39.9
arahy.Tifrunner.gnm1.ann1.CRY23I Arachis hypogaea HOM05D005030 ORTHO05D006490 1.2e-40 171.0 255 39.6
MELO3C008038.2 Cucumis melo HOM05D005030 ORTHO05D006490 1.6e-40 170.6 268 36.9
CsaV3_6G041830 Cucumis sativus L. HOM05D005030 ORTHO05D006490 2.1e-40 170.2 272 36.4
QL06p030436 Quercus lobata HOM05D005030 ORTHO05D006490 2.1e-40 170.2 221 43.0
PGR102G2159 Punica granatum HOM05D005030 ORTHO05D006490 6.0e-40 168.7 266 38.7
PSO210G3052 Papaver somniferum HOM05D005030 ORTHO05D006490 1.0e-39 167.9 279 39.1
Carub.0003s1851 Capsella rubella HOM05D005030 ORTHO05D006490 1.3e-39 167.5 274 38.7
PSO832G2315 Papaver somniferum HOM05D005030 ORTHO05D006490 1.3e-39 167.5 276 39.5
THA.LOC104821859 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 1.8e-39 167.2 278 38.1
AT3G18730 Arabidopsis thaliana HOM05D005030 ORTHO05D006490 2.3e-39 166.8 265 37.7
HanXRQChr02g0043651 Helianthus annuus HOM05D005030 ORTHO05D006490 2.3e-39 166.8 265 39.2
Ah.03g146670 Amaranthus hybridus HOM05D005030 ORTHO05D006490 6.7e-39 165.2 267 39.0
Sp3g16780 Schrenkiella parvula HOM05D005030 ORTHO05D006490 1.1e-38 164.5 275 37.5
A05p30890 Brassica napus HOM05D005030 ORTHO05D006490 1.5e-38 164.1 268 38.8
AUR62017924 Chenopodium quinoa HOM05D005030 ORTHO05D006490 1.5e-38 164.1 262 38.9
CARHR094120 Cardamine hirsuta HOM05D005030 ORTHO05D006490 2.5e-38 163.3 261 38.7
CiPaw.03G127200 Carya illinoinensis HOM05D005030 ORTHO05D006490 2.5e-38 163.3 265 41.1
Thhalv10019906m.g Eutrema salsugineum HOM05D005030 ORTHO05D006490 2.5e-38 163.3 274 37.2
CiPaw.03G127500 Carya illinoinensis HOM05D005030 ORTHO05D006490 3.3e-38 162.9 274 40.9
AL3G32080 Arabidopsis lyrata HOM05D005030 ORTHO05D006490 4.3e-38 162.5 269 36.8
BraA05t21931Z Brassica rapa HOM05D005030 ORTHO05D006490 4.3e-38 162.5 274 38.3
BcaC05g28579 Brassica carinata HOM05D005030 ORTHO05D006490 7.4e-38 161.8 272 36.8
C05p46820 Brassica napus HOM05D005030 ORTHO05D006490 7.4e-38 161.8 272 36.8
BolC5t33412H Brassica oleracea HOM05D005030 ORTHO05D006490 7.4e-38 161.8 272 36.8
SGA_v2.0_scaffold137G35137 Striga asiatica HOM05D005030 ORTHO05D006490 1.6e-37 160.6 279 38.4
Lsat_1_v5_gn_1_117161 Lactuca sativa HOM05D005030 ORTHO05D006490 2.2e-37 160.2 286 36.4
Os02g0782800 Oryza sativa ssp. japonica HOM05D005030 ORTHO05D006490 8.2e-37 158.3 271 39.1
THA.LOC104820424 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 6.9e-36 155.2 266 39.1
ATR0772G104 Amborella trichopoda HOM05D005030 ORTHO05D006490 4.5e-35 152.5 285 37.2
CDE06G1651 Ceratophyllum demersum HOM05D005030 ORTHO05D006490 5.9e-35 152.1 265 37.0
TAR381G0325 Trochodendron aralioides HOM05D005030 ORTHO05D006490 3.9e-31 139.4 168 45.8
MD00G1172700 Malus domestica HOM05D005030 ORTHO05D006490 1.1e-30 137.9 272 34.9
ECA240G4559 Erigeron canadensis HOM05D005030 ORTHO05D006490 5.3e-28 129.0 249 37.3
BcaNung06136 Brassica carinata HOM05D005030 ORTHO05D006490 1.7e-26 124.0 209 39.2
Hma1.2p1_0006F.1_g004730 Hydrangea macrophylla HOM05D005030 ORTHO05D006490 1.8e-20 104.0 173 38.7
HPP92_005719 Vanilla planifolia HOM05D005030 ORTHO05D006490 1.5e-19 100.9 214 34.6
SEGI_08752 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 2.6e-19 100.1 345 25.2
SEGI_37730 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 9.7e-14 81.6 75 46.7
Pp3c6_6440 Physcomitrium patens HOM05D005030 ORTHO05D006490 5.0e-10 69.3 309 23.0
Mapoly0047s0105 Marchantia polymorpha HOM05D005030 ORTHO05D006490 3.2e-09 66.6 105 35.2
Actinidia09824 Actinidia chinensis HOM05D005030 ORTHO05D001675 8.0e-08 62.0 78 42.3
TAR376G0051 Trochodendron aralioides HOM05D005030 ORTHO05D006490 1.0e-07 61.6 121 39.7
SMO203G0163 Selaginella moellendorffii HOM05D005030 ORTHO05D006490 2.6e-06 57.0 102 32.4


User provided reference genes

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