Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400025546 Solanum tuberosum HOM05D000011 ORTHO05D397444 5.8e-115 417.5 208 100.0
PGSC0003DMG400025545 Solanum tuberosum HOM05D000011 ORTHO05D000018 6.3e-61 238.0 159 74.2
Nitab4.5_0006086g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 3.1e-31 139.4 158 51.9
Nitab4.5_0006086g0040 Nicotiana tabacum HOM05D000011 ORTHO05D000018 6.4e-29 131.7 155 50.3
Nitab4.5_0012424g0010 Nicotiana tabacum HOM05D000011 ORTHO05D010520 1.9e-28 130.2 157 47.8
Nitab4.5_0007378g0030 Nicotiana tabacum HOM05D000011 ORTHO05D000018 5.4e-28 128.6 161 46.6
PGSC0003DMG400018441 Solanum tuberosum HOM05D000011 ORTHO05D000018 1.2e-27 127.5 156 50.0
Nitab4.5_0007378g0050 Nicotiana tabacum HOM05D000011 ORTHO05D000018 1.6e-27 127.1 155 49.0
Nitab4.5_0006086g0020 Nicotiana tabacum HOM05D000011 ORTHO05D000018 2.1e-27 126.7 157 46.5
Nitab4.5_0007378g0020 Nicotiana tabacum HOM05D000011 ORTHO05D000018 2.7e-27 126.3 157 47.1
CAN.G767.30 Capsicum annuum HOM05D000011 ORTHO05D000018 4.6e-27 125.6 159 47.2
CAN.G975.15 Capsicum annuum HOM05D000011 ORTHO05D000018 6.0e-27 125.2 163 46.0
Peaxi162Scf00541g00329 Petunia axillaris HOM05D000011 ORTHO05D010520 5.1e-26 122.1 129 55.0
Nitab4.5_0009999g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 4.3e-25 119.0 156 48.1
PGSC0003DMG402004578 Solanum tuberosum HOM05D000011 ORTHO05D000018 9.6e-25 117.9 150 46.0
Nitab4.5_0007378g0070 Nicotiana tabacum HOM05D000011 ORTHO05D000018 1.6e-24 117.1 163 46.6
CAN.G1335.5 Capsicum annuum HOM05D000011 ORTHO05D000018 2.8e-24 116.3 156 46.8
Nitab4.5_0013571g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 2.4e-23 113.2 154 46.1
Nitab4.5_0000703g0130 Nicotiana tabacum HOM05D000011 ORTHO05D000018 9.9e-22 107.8 161 44.1
Sopen05g003530 Solanum pennellii HOM05D000011 ORTHO05D000018 9.9e-22 107.8 149 47.7
CAN.G767.23 Capsicum annuum HOM05D000011 ORTHO05D000018 1.3e-21 107.5 150 43.3
Nitab4.5_0012885g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 1.3e-21 107.5 165 40.6
CAN.G767.27 Capsicum annuum HOM05D000011 ORTHO05D000018 1.7e-21 107.1 199 40.7
Solyc05g007640.3 Solanum lycopersicum HOM05D000011 ORTHO05D000018 2.2e-21 106.7 172 43.6
Nitab4.5_0015686g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 2.9e-21 106.3 158 44.9
Peaxi162Scf00541g00212 Petunia axillaris HOM05D000011 ORTHO05D010520 2.9e-21 106.3 150 46.7
CAN.G767.29 Capsicum annuum HOM05D000011 ORTHO05D000018 3.2e-20 102.8 159 43.4
Nitab4.5_0000703g0150 Nicotiana tabacum HOM05D000011 ORTHO05D000018 4.2e-20 102.4 161 42.2
Peaxi162Scf01501g00002 Petunia axillaris HOM05D000011 ORTHO05D036939 7.1e-20 101.7 158 44.9
CAN.G411.39 Capsicum annuum HOM05D000011 ORTHO05D000018 1.2e-19 100.9 172 44.8
CAN.G767.32 Capsicum annuum HOM05D000011 ORTHO05D000018 2.1e-19 100.1 158 42.4
Nitab4.5_0008680g0020 Nicotiana tabacum HOM05D000011 ORTHO05D000018 2.7e-19 99.8 160 41.2
Nitab4.5_0000703g0140 Nicotiana tabacum HOM05D000011 ORTHO05D000018 3.5e-19 99.4 161 42.2
Nitab4.5_0000703g0170 Nicotiana tabacum HOM05D000011 ORTHO05D000018 3.5e-19 99.4 177 39.0
Nitab4.5_0009597g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 4.6e-19 99.0 169 41.4
Nitab4.5_0004661g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 7.8e-19 98.2 96 56.2
Nitab4.5_0001503g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 2.3e-18 96.7 158 44.3
Nitab4.5_0026414g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 2.3e-18 96.7 158 43.0
CAN.G58.59 Capsicum annuum HOM05D000011 ORTHO05D000018 1.1e-17 94.4 155 43.2
Nitab4.5_0003106g0020 Nicotiana tabacum HOM05D000011 ORTHO05D000018 4.8e-16 89.0 172 39.5
Nitab4.5_0002323g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 6.9e-15 85.1 156 41.0
Nitab4.5_0000703g0180 Nicotiana tabacum HOM05D000011 ORTHO05D036939 2.0e-14 83.6 158 39.9
Nitab4.5_0016579g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 5.8e-14 82.0 94 46.8
Solyc05g007610.2 Solanum lycopersicum HOM05D000011 ORTHO05D000018 5.8e-14 82.0 147 38.1
Nitab4.5_0005071g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 1.3e-13 80.9 161 37.9
Sopen05g003490 Solanum pennellii HOM05D000011 ORTHO05D000018 1.7e-13 80.5 147 37.4
PGSC0003DMG400028339 Solanum tuberosum HOM05D000011 ORTHO05D000018 2.2e-13 80.1 156 38.5
Solyc05g012910.4 Solanum lycopersicum HOM05D000011 ORTHO05D000018 4.9e-13 79.0 147 38.8
CAN.G488.11 Capsicum annuum HOM05D000011 ORTHO05D000018 6.4e-13 78.6 194 33.0
Nitab4.5_0003823g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 6.4e-13 78.6 172 37.8
CAN.G964.19 Capsicum annuum HOM05D000011 ORTHO05D000018 1.9e-12 77.0 115 40.9
Peaxi162Scf00222g01021 Petunia axillaris HOM05D000011 ORTHO05D010520 4.2e-12 75.9 155 38.7
Nitab4.5_0004324g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 5.4e-12 75.5 191 34.0
Nitab4.5_0000391g0020 Nicotiana tabacum HOM05D000011 ORTHO05D000018 1.6e-11 73.9 147 36.7
CAN.G1335.4 Capsicum annuum HOM05D000011 ORTHO05D002202 2.1e-11 73.6 155 36.1
Nitab4.5_0014919g0010 Nicotiana tabacum HOM05D000011 ORTHO05D011641 2.1e-11 73.6 57 64.9
Sopen05g007710 Solanum pennellii HOM05D000011 ORTHO05D000018 2.7e-11 73.2 105 40.0
Nitab4.5_0008638g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 4.6e-11 72.4 145 35.9
Peaxi162Scf00364g00243 Petunia axillaris HOM05D000011 ORTHO05D020908 7.9e-11 71.6 147 35.4
Sopen05g003260 Solanum pennellii HOM05D000011 ORTHO05D000018 1.0e-10 71.2 163 41.1
PGSC0003DMG400023062 Solanum tuberosum HOM05D000011 ORTHO05D000018 1.3e-10 70.9 163 41.1
Cc11_g02470 Coffea canephora HOM05D000011 ORTHO05D000018 1.8e-10 70.5 192 32.3
Nitab4.5_0010109g0010 Nicotiana tabacum HOM05D000011 ORTHO05D020908 2.3e-10 70.1 147 36.7
CAN.G1099.15 Capsicum annuum HOM05D000011 ORTHO05D000018 3.0e-10 69.7 147 36.7
Cc11_g04150 Coffea canephora HOM05D000011 ORTHO05D000018 3.9e-10 69.3 194 30.9
Nitab4.5_0000391g0040 Nicotiana tabacum HOM05D000011 ORTHO05D000018 3.9e-10 69.3 147 36.7
Nitab4.5_0005071g0030 Nicotiana tabacum HOM05D000011 ORTHO05D000018 3.9e-10 69.3 101 41.6
Nitab4.5_0006086g0030 Nicotiana tabacum HOM05D000011 ORTHO05D000018 3.9e-10 69.3 157 36.9
Peaxi162Scf00541g00328 Petunia axillaris HOM05D000011 ORTHO05D010520 3.9e-10 69.3 105 42.9
Nitab4.5_0004661g0100 Nicotiana tabacum HOM05D000011 ORTHO05D010520 6.7e-10 68.6 66 57.6
Nitab4.5_0010766g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 6.7e-10 68.6 147 34.7
Solyc04g007490.3 Solanum lycopersicum HOM05D000011 ORTHO05D000018 6.7e-10 68.6 160 36.9
PGSC0003DMG400018442 Solanum tuberosum HOM05D000011 ORTHO05D000018 6.7e-10 68.6 156 35.9
Nitab4.5_0002323g0040 Nicotiana tabacum HOM05D000011 ORTHO05D000018 8.7e-10 68.2 161 35.4
Solyc05g007630.3 Solanum lycopersicum HOM05D000011 ORTHO05D000018 8.7e-10 68.2 156 37.2
Sopen05g001340 Solanum pennellii HOM05D000011 ORTHO05D000018 1.1e-09 67.8 171 33.9
Oeu033306.2 Olea europaea HOM05D000011 ORTHO05D000018 1.9e-09 67.0 195 32.8
Cc05_g05230 Coffea canephora HOM05D000011 ORTHO05D000018 4.3e-09 65.9 157 35.7
Nitab4.5_0000198g0140 Nicotiana tabacum HOM05D000011 ORTHO05D000018 4.3e-09 65.9 169 33.1
Solyc05g007170.3 Solanum lycopersicum HOM05D000011 ORTHO05D051222 5.6e-09 65.5 193 33.2
CAN.G1069.15 Capsicum annuum HOM05D000011 ORTHO05D000018 7.4e-09 65.1 168 35.7
CAN.G58.61 Capsicum annuum HOM05D000426 ORTHO05D000328 7.4e-09 65.1 156 35.3
Nitab4.5_0006641g0030 Nicotiana tabacum HOM05D000011 ORTHO05D000018 7.4e-09 65.1 169 32.5
Sopen05g007570 Solanum pennellii HOM05D000011 ORTHO05D000018 1.3e-08 64.3 144 36.1
PGSC0003DMG400005970 Solanum tuberosum HOM05D000011 ORTHO05D000018 1.3e-08 64.3 160 35.0
CAN.G1207.1 Capsicum annuum HOM05D000011 ORTHO05D000018 1.6e-08 63.9 175 36.0
Nitab4.5_0011478g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 2.1e-08 63.5 164 35.4
Solyc05g005330.3 Solanum lycopersicum HOM05D000011 ORTHO05D000018 2.1e-08 63.5 171 32.2
Sopen05g003520 Solanum pennellii HOM05D000011 ORTHO05D000018 2.8e-08 63.2 98 41.8
Cc00_g15830 Coffea canephora HOM05D000011 ORTHO05D000018 3.7e-08 62.8 217 32.3
Solyc05g012740.2 Solanum lycopersicum HOM05D000011 ORTHO05D000018 3.7e-08 62.8 144 36.1
Cc11_g02960 Coffea canephora HOM05D000011 ORTHO05D000018 4.8e-08 62.4 192 32.8
Peaxi162Scf02751g00002 Petunia axillaris HOM05D000011 ORTHO05D036939 4.8e-08 62.4 107 43.0
Solyc05g007350.3 Solanum lycopersicum HOM05D000011 ORTHO05D000018 6.2e-08 62.0 99 49.5
CAN.G1638.5 Capsicum annuum HOM05D000011 ORTHO05D000018 8.1e-08 61.6 144 36.8
Cc10_g11650 Coffea canephora HOM05D000011 ORTHO05D000018 8.1e-08 61.6 173 33.5
Peaxi162Scf00364g00023 Petunia axillaris HOM05D000011 ORTHO05D020908 1.4e-07 60.8 170 30.6
PGSC0003DMG400013490 Solanum tuberosum HOM05D000011 ORTHO05D011641 1.4e-07 60.8 170 37.1
Nitab4.5_0002323g0020 Nicotiana tabacum HOM05D000011 ORTHO05D000018 1.8e-07 60.5 163 35.0
Nitab4.5_0004661g0050 Nicotiana tabacum HOM05D000011 ORTHO05D000018 1.8e-07 60.5 79 46.8
Nitab4.5_0010918g0020 Nicotiana tabacum HOM05D000011 ORTHO05D011641 1.8e-07 60.5 169 34.9
Cc01_g07940 Coffea canephora HOM05D000011 ORTHO05D000018 2.4e-07 60.1 172 34.3
CAN.G767.31 Capsicum annuum HOM05D000011 ORTHO05D000018 4.0e-07 59.3 122 36.9
Nitab4.5_0003642g0040 Nicotiana tabacum HOM05D000011 ORTHO05D011641 4.0e-07 59.3 168 33.3
Nitab4.5_0000280g0140 Nicotiana tabacum HOM05D000011 ORTHO05D000018 5.3e-07 58.9 162 34.0
Nitab4.5_0003106g0030 Nicotiana tabacum HOM05D000011 ORTHO05D000018 6.9e-07 58.5 168 33.3
Nitab4.5_0005645g0020 Nicotiana tabacum HOM05D000011 ORTHO05D000018 1.2e-06 57.8 134 37.3
Solyc05g005130.3 Solanum lycopersicum HOM05D000011 ORTHO05D011641 1.5e-06 57.4 167 31.7
Cc02_g33010 Coffea canephora HOM05D000011 ORTHO05D000018 2.0e-06 57.0 132 34.1
Nitab4.5_0010918g0010 Nicotiana tabacum HOM05D000011 ORTHO05D011641 2.0e-06 57.0 169 34.9
PGSC0003DMG400013506 Solanum tuberosum HOM05D000011 ORTHO05D000018 2.0e-06 57.0 156 34.6
Cc11_g04080 Coffea canephora HOM05D000011 ORTHO05D000018 2.6e-06 56.6 188 30.3
Cc11_g06320 Coffea canephora HOM05D000011 ORTHO05D000018 2.6e-06 56.6 192 27.6
Hma1.2p1_1314F.1_g275010 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 4.5e-06 55.8 142 33.8
Nitab4.5_0002536g0020 Nicotiana tabacum HOM05D000011 ORTHO05D011641 4.5e-06 55.8 196 32.1
Nitab4.5_0008184g0010 Nicotiana tabacum HOM05D000011 ORTHO05D016874 4.5e-06 55.8 165 33.3
Peaxi162Scf01176g00132 Petunia axillaris HOM05D000011 ORTHO05D010520 4.5e-06 55.8 122 36.1
Nitab4.5_0007021g0010 Nicotiana tabacum HOM05D000011 ORTHO05D036877 5.8e-06 55.5 166 32.5
Sopen05g001140 Solanum pennellii HOM05D000011 ORTHO05D011641 5.8e-06 55.5 167 31.1
Sopen05g008040 Solanum pennellii HOM05D000011 ORTHO05D011641 5.8e-06 55.5 170 32.4
Cc02_g33000 Coffea canephora HOM05D000011 ORTHO05D000018 7.6e-06 55.1 149 31.5
Nitab4.5_0003292g0050 Nicotiana tabacum HOM05D000011 ORTHO05D011641 7.6e-06 55.1 168 33.3
Nitab4.5_0011749g0020 Nicotiana tabacum HOM05D000011 ORTHO05D020908 7.6e-06 55.1 153 29.4
Peaxi162Scf00364g00024 Petunia axillaris HOM05D000011 ORTHO05D020908 7.6e-06 55.1 97 39.2
PGSC0003DMG400025099 Solanum tuberosum HOM05D000011 ORTHO05D011641 7.6e-06 55.1 169 34.3
Sopen04g002560 Solanum pennellii HOM05D000011 ORTHO05D000018 9.9e-06 54.7 70 44.3


User provided reference genes

Program Settings