Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400025302 Solanum tuberosum HOM05D007982 ORTHO05D010255 4.3e-300 1033.9 518 100.0
Sopen04g004060 Solanum pennellii HOM05D007982 ORTHO05D010255 8.7e-277 956.4 518 91.1
Solyc04g008880.4 Solanum lycopersicum HOM05D007982 ORTHO05D010255 6.2e-275 950.3 518 91.5
Nitab4.5_0003038g0010 Nicotiana tabacum HOM05D007982 ORTHO05D010255 1.4e-258 896.0 519 85.9
Nitab4.5_0001379g0110 Nicotiana tabacum HOM05D007982 ORTHO05D010255 6.3e-251 870.5 507 85.2
Peaxi162Scf00681g00437 Petunia axillaris HOM05D007982 ORTHO05D010255 2.7e-238 828.6 507 81.3
Migut.E00677 Erythranthe guttata HOM05D007982 ORTHO05D010255 1.2e-180 637.1 460 68.3
Dinv07497 Davidia involucrata HOM05D007982 ORTHO05D010255 1.3e-176 623.6 462 66.9
RhsimUnG0103100 Rhododendron simsii HOM05D007982 ORTHO05D010255 2.4e-170 602.8 460 64.6
CSS0047094 Camellia sinensis var. sinensis HOM05D007982 ORTHO05D010255 2.7e-169 599.4 459 64.1
Hma1.2p1_0044F.1_g026360 Hydrangea macrophylla HOM05D007982 ORTHO05D010255 1.3e-168 597.0 508 58.7
GSVIVG01034385001 Vitis vinifera HOM05D007982 ORTHO05D010255 3.3e-167 592.4 461 62.7
QL01p000856 Quercus lobata HOM05D007982 ORTHO05D010255 5.3e-165 585.1 471 61.4
COL.COLO4_02959 Corchorus olitorius HOM05D007982 ORTHO05D010255 5.8e-164 581.6 471 58.6
Nn4g25166 Nelumbo nucifera HOM05D007982 ORTHO05D010255 2.4e-162 576.2 462 59.5
Thecc.02G154200 Theobroma cacao HOM05D007982 ORTHO05D010255 1.6e-161 573.5 471 59.4
Cfa018656 Carpinus fangiana HOM05D007982 ORTHO05D010255 4.6e-161 572.0 464 60.6
PGR142G3837 Punica granatum HOM05D007982 ORTHO05D010255 8.1e-158 561.2 492 58.1
MBI06_g27478_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 7.6e-156 554.7 475 58.1
Prupe.1G349600 Prunus persica HOM05D007982 ORTHO05D010255 2.9e-155 552.7 471 58.2
MD13G1002800 Malus domestica HOM05D007982 ORTHO05D010255 4.9e-155 552.0 503 56.1
Ciclev10031355m.g Citrus clementina HOM05D007982 ORTHO05D010255 1.2e-153 547.4 473 58.8
Aqoxy3G04317 Aquilegia oxysepala HOM05D007982 ORTHO05D010255 1.6e-153 547.0 466 56.9
CANSAT78G2255 Cannabis sativa HOM05D007982 ORTHO05D010255 8.7e-152 541.2 406 64.5
Gohir.D12G136100 Gossypium hirsutum HOM05D007982 ORTHO05D010255 3.7e-150 535.8 476 55.7
Gorai.008G147300 Gossypium raimondii HOM05D007982 ORTHO05D010255 1.4e-149 533.9 476 55.5
Gohir.A12G132500 Gossypium hirsutum HOM05D007982 ORTHO05D010255 1.8e-149 533.5 476 55.5
Haze_17412 Corylus avellana HOM05D007982 ORTHO05D010255 6.7e-128 461.8 478 50.4
HPP92_015183 Vanilla planifolia HOM05D007982 ORTHO05D010255 5.5e-122 442.2 471 48.8
Actinidia04353 Actinidia chinensis HOM05D007982 ORTHO05D010255 2.4e-117 426.8 313 65.5
Pp3c22_18880 Physcomitrium patens HOM05D007982 ORTHO05D010255 6.1e-113 412.1 492 45.5
SMO259G0034 Selaginella moellendorffii HOM05D007982 ORTHO05D010255 7.0e-109 398.7 507 42.6
Oeu027929.1 Olea europaea HOM05D007982 ORTHO05D010255 6.5e-107 392.1 458 47.8
Mapoly0001s0484 Marchantia polymorpha HOM05D007982 ORTHO05D010255 4.4e-103 379.4 503 41.2
AagrBONN_evm.TU.Sc2ySwM_362.2345 Anthoceros agrestis HOM05D007982 ORTHO05D010255 6.8e-96 355.5 402 48.3
Atru.chr11.1247 Acer truncatum HOM05D007982 ORTHO05D010255 7.3e-90 335.5 262 60.7
Cpa.g.c40876 Carica papaya HOM05D007982 ORTHO05D010255 1.3e-86 324.7 240 63.8
SalBow2G1914 Salvia bowleyana HOM05D007982 ORTHO05D010255 8.1e-73 278.9 206 65.5
SEGI_18232 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 9.9e-63 245.4 236 51.7
SEGI_24738 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 9.9e-63 245.4 236 51.7
MBI14_g28586_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.5e-58 231.5 234 53.4
FAN17G1590 Fragaria x ananassa HOM05D007982 ORTHO05D010255 2.2e-54 217.6 319 43.3
Cpa.g.sc138.6 Carica papaya HOM05D007982 ORTHO05D010255 4.9e-54 216.5 178 60.7
MBI17_g03293_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 6.0e-52 209.5 184 59.2
PRCOL_00006233 Prasinoderma coloniale HOM05D007982 ORTHO05D010255 8.7e-51 205.7 517 30.8
MBI09_g17621_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.8e-49 200.7 180 57.8
MBI19_g41559_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 3.7e-49 200.3 180 57.2
Atru.chr11.1266 Acer truncatum HOM05D007982 ORTHO05D010255 6.9e-48 196.1 225 45.3
MBI09_g40719_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.0e-47 194.5 180 56.7
MBI14_g39939_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 4.5e-47 193.4 169 59.2
MBI05_g11582_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.4e-45 188.3 172 57.0
MBI04_g26113_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.9e-42 177.9 165 55.8
FvH4_4g37200 Fragaria vesca HOM05D007982 ORTHO05D010255 4.3e-42 176.8 264 40.9
Nitab4.5_0003088g0030 Nicotiana tabacum HOM05D007982 ORTHO05D010293 2.8e-41 174.1 205 50.7
SEGI_11934 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 4.0e-40 170.2 241 40.7
Nitab4.5_0001462g0020 Nicotiana tabacum HOM05D007982 ORTHO05D010255 1.7e-38 164.9 173 54.9
FAN12G3848 Fragaria x ananassa HOM05D007982 ORTHO05D010255 2.9e-38 164.1 181 48.6
MBI09_g45432_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.5e-37 161.0 121 65.3
MBI18_g19089_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 7.4e-34 149.4 178 46.6
MBI18_g45738_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.6e-33 148.3 139 54.0
Gohir.D13G112900 Gossypium hirsutum HOM05D007982 ORTHO05D010255 2.8e-33 147.5 166 47.6
MBI18_g03299_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 3.7e-33 147.1 139 53.2
Nitab4.5_0001297g0080 Nicotiana tabacum HOM05D007982 ORTHO05D010255 5.5e-29 133.3 185 49.2
Nitab4.5_0000082g0440 Nicotiana tabacum HOM05D003015 ORTHO05D003733 1.6e-28 131.7 123 55.3
PGSC0003DMG400013554 Solanum tuberosum HOM05D007982 ORTHO05D010951 8.8e-27 125.9 101 66.3
Gohir.D03G023166 Gossypium hirsutum HOM05D007982 ORTHO05D010255 7.7e-23 112.8 113 53.1
Gorai.003G023800 Gossypium raimondii HOM05D007982 ORTHO05D010255 1.3e-22 112.1 111 53.2
Nitab4.5_0001269g0080 Nicotiana tabacum HOM05D009415 ORTHO05D008933 5.0e-22 110.2 110 52.7
Nitab4.5_0001462g0030 Nicotiana tabacum HOM05D007982 ORTHO05D286115 5.0e-22 110.2 116 55.2
MBI06_g30604_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 5.5e-21 106.7 125 47.2
Cpa.g.sc138.10 Carica papaya HOM05D007982 ORTHO05D010255 8.8e-19 99.4 307 29.0
Gohir.D06G142033 Gossypium hirsutum HOM05D007982 ORTHO05D010255 1.3e-17 95.5 81 59.3
Pp3s92_70 Physcomitrium patens HOM05D007982 ORTHO05D034158 1.3e-17 95.5 352 27.0
Nitab4.5_0014613g0010 Nicotiana tabacum HOM05D003277 ORTHO05D003275 1.4e-16 92.0 80 52.5
Nitab4.5_0005642g0050 Nicotiana tabacum HOM05D007982 ORTHO05D283853 4.5e-15 87.0 102 43.1
Cpa.g.sc138.4 Carica papaya HOM05D007982 ORTHO05D010255 3.2e-13 80.9 69 47.8
Nitab4.5_0001462g0040 Nicotiana tabacum HOM05D007982 ORTHO05D283512 4.4e-10 70.5 78 44.9
AagrBONN_evm.TU.Sc2ySwM_228.1600 Anthoceros agrestis HOM05D005554 ORTHO05D007823 1.7e-09 68.6 357 26.1
SMO147G0132 Selaginella moellendorffii HOM05D005554 ORTHO05D007823 2.2e-09 68.2 362 26.5
Gorai.010G165700 Gossypium raimondii HOM05D000288 ORTHO05D000173 1.1e-08 65.9 56 55.4
Mapoly0091s0082 Marchantia polymorpha HOM05D005554 ORTHO05D007823 7.0e-08 63.2 355 25.1
HPP92_014728 Vanilla planifolia HOM05D005554 ORTHO05D007823 7.0e-08 63.2 361 25.2
Nitab4.5_0010813g0010 Nicotiana tabacum HOM05D005554 ORTHO05D007823 2.0e-07 61.6 426 24.2
FAN12G3608 Fragaria x ananassa HOM05D007982 ORTHO05D010255 2.6e-07 61.2 149 34.9
Nitab4.5_0001615g0110 Nicotiana tabacum HOM05D005554 ORTHO05D007823 7.7e-07 59.7 370 24.6
Peaxi162Scf00119g01015 Petunia axillaris HOM05D005554 ORTHO05D007823 1.7e-06 58.5 408 23.8
Dinv38934 Davidia involucrata HOM05D005554 ORTHO05D007823 2.9e-06 57.8 356 25.0


User provided reference genes

Program Settings