Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 1.5e-147 526.2 271 100.0
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 2.1e-141 505.8 271 96.3
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 8.9e-140 500.4 271 95.6
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 2.3e-135 485.7 271 90.4
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 4.3e-134 481.5 271 90.8
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 2.1e-133 479.2 271 92.6
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 1.8e-132 476.1 271 89.7
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 2.5e-97 359.4 273 69.2
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 3.2e-97 359.0 272 68.8
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 4.2e-97 358.6 271 69.4
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 1.6e-96 356.7 243 73.7
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 2.1e-96 356.3 271 67.5
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 2.3e-95 352.8 271 67.2
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 8.8e-95 350.9 271 66.8
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 8.8e-95 350.9 271 66.8
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 1.3e-93 347.1 271 66.8
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 4.1e-92 342.0 272 65.4
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 1.5e-91 340.1 271 64.2
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 2.6e-91 339.3 271 64.2
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 4.5e-91 338.6 271 63.1
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 1.3e-90 337.0 271 63.8
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 1.1e-89 334.0 271 64.9
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 4.2e-89 332.0 271 60.5
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 4.2e-89 332.0 271 63.5
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 1.6e-88 330.1 271 64.2
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 2.7e-88 329.3 271 64.2
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 2.7e-88 329.3 271 64.2
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 1.8e-87 326.6 271 61.6
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 2.3e-87 326.2 274 60.9
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 3.0e-87 325.9 271 61.3
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 3.0e-87 325.9 274 62.0
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 5.1e-87 325.1 271 60.5
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 6.7e-87 324.7 272 62.1
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 8.8e-87 324.3 233 69.5
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 2.6e-86 322.8 272 61.4
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 5.7e-86 321.6 252 64.3
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 1.3e-85 320.5 238 66.0
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 1.7e-85 320.1 271 60.5
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 2.8e-85 319.3 238 65.5
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 4.8e-85 318.5 270 62.2
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 6.3e-85 318.2 272 60.3
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 3.1e-84 315.8 233 66.1
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 1.2e-83 313.9 246 66.3
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 2.6e-83 312.8 271 60.1
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 5.9e-83 311.6 273 63.0
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 1.0e-82 310.8 238 65.1
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 1.0e-82 310.8 272 61.0
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 2.9e-82 309.3 272 60.3
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 1.4e-81 307.0 272 58.8
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 1.2e-80 303.9 271 58.3
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 1.6e-80 303.5 238 63.4
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 6.1e-80 301.6 271 56.1
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 1.4e-79 300.4 272 58.8
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 3.9e-79 298.9 276 59.1
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 6.7e-79 298.1 246 60.6
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 1.5e-78 297.0 273 60.1
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 5.7e-78 295.0 273 59.7
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 7.4e-78 294.7 273 60.1
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 7.4e-78 294.7 241 62.2
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 9.7e-78 294.3 273 59.7
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 4.8e-77 292.0 273 57.5
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 6.3e-77 291.6 276 58.3
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 6.3e-77 291.6 276 58.3
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 2.4e-76 289.7 239 62.3
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 4.1e-76 288.9 278 57.6
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 4.1e-76 288.9 278 57.6
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 5.3e-76 288.5 274 56.9
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 7.0e-76 288.1 273 57.9
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 1.2e-75 287.3 273 57.1
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 2.0e-75 286.6 214 69.2
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 2.0e-75 286.6 273 58.6
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 2.6e-75 286.2 280 57.5
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 1.0e-74 284.3 272 56.2
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 1.5e-73 280.4 276 57.6
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 2.5e-73 279.6 218 61.5
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 5.5e-73 278.5 280 55.4
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 1.2e-72 277.3 262 54.6
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 5.2e-71 271.9 236 58.9
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 5.2e-71 271.9 236 58.9
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 8.8e-71 271.2 236 59.7
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 4.4e-70 268.9 190 70.5
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 1.4e-68 263.8 277 54.2
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 2.4e-68 263.1 276 54.3
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 2.0e-67 260.0 241 58.5
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 2.7e-67 259.6 273 54.6
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 1.3e-61 240.7 240 57.1
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 1.8e-60 236.9 261 51.7
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 2.8e-56 223.0 271 48.0
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 2.8e-56 223.0 271 48.0
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 8.9e-55 218.0 276 48.2
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 1.5e-54 217.2 270 47.8
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 4.4e-54 215.7 269 45.0
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 9.8e-54 214.5 235 51.9
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 8.3e-53 211.5 271 46.9
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 1.4e-52 210.7 236 47.0
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 4.1e-52 209.1 271 46.1
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 4.1e-52 209.1 271 46.5
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 7.8e-51 204.9 228 54.4
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 7.8e-51 204.9 262 45.0
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 1.0e-50 204.5 269 43.9
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 3.3e-49 199.5 238 50.0
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 1.2e-48 197.6 234 47.4
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 6.0e-43 178.7 272 43.0
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 1.3e-42 177.6 200 50.5
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 2.3e-42 176.8 200 50.5
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 2.1e-40 170.2 240 44.6
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 7.0e-36 155.2 237 38.8
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 7.8e-35 151.8 242 40.1
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 4.6e-27 125.9 221 38.9
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 2.3e-26 123.6 223 37.2
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 2.5e-25 120.2 88 67.0
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 1.6e-24 117.5 232 35.8
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 4.7e-24 115.9 160 42.5
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 8.9e-23 111.7 219 35.2
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 1.4e-20 104.4 108 45.4
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 3.5e-19 99.8 111 55.9
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 4.6e-19 99.4 122 48.4
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 1.6e-16 90.9 122 47.5
Cre01.g037650 Chlamydomonas reinhardtii HOM05D006853 ORTHO05D008906 2.9e-13 80.1 234 31.2
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 1.3e-10 71.2 70 52.9
BraA09t38070Z Brassica rapa HOM05D006853 ORTHO05D008906 9.9e-06 55.1 37 70.3


User provided reference genes

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