Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400025075 Solanum tuberosum HOM05D007964 ORTHO05D010090 2.7e-73 278.5 132 100.0
Peaxi162Scf00360g00092 Petunia axillaris HOM05D007964 ORTHO05D010090 9.6e-55 216.9 135 79.3
Sopen04g028110 Solanum pennellii HOM05D007964 ORTHO05D010090 2.3e-48 195.7 98 90.8
Nitab4.5_0003178g0050 Nicotiana tabacum HOM05D007964 ORTHO05D010090 9.6e-47 190.3 133 71.4
Nitab4.5_0003443g0080 Nicotiana tabacum HOM05D007964 ORTHO05D010090 2.1e-46 189.1 133 70.7
CAN.G1183.20 Capsicum annuum HOM05D007964 ORTHO05D010090 1.5e-44 183.0 95 84.2
Oeu046067.1 Olea europaea HOM05D007964 ORTHO05D010090 1.9e-39 166.0 131 67.2
Hma1.2p1_0678F.1_g202130 Hydrangea macrophylla HOM05D007964 ORTHO05D010090 1.9e-34 149.4 123 60.2
Migut.O00757 Erythranthe guttata HOM05D007964 ORTHO05D010090 4.2e-34 148.3 131 55.7
Migut.N02947 Erythranthe guttata HOM05D007964 ORTHO05D010090 2.1e-33 146.0 131 55.7
CSS0037867 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 6.1e-33 144.4 135 56.3
CSS0006430 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 1.0e-32 143.7 135 56.3
SalBow6G4546 Salvia bowleyana HOM05D007964 ORTHO05D010090 5.1e-32 141.4 134 58.2
SGA_v2.0_scaffold54G19690 Striga asiatica HOM05D007964 ORTHO05D010090 8.7e-32 140.6 131 54.2
QL02p037092 Quercus lobata HOM05D007964 ORTHO05D010090 3.7e-30 135.2 135 56.3
QL02p036563 Quercus lobata HOM05D007964 ORTHO05D010090 3.1e-29 132.1 135 55.6
Cfa018267 Carpinus fangiana HOM05D007964 ORTHO05D010090 1.2e-28 130.2 138 52.2
Potri.005G198200 Populus trichocarpa HOM05D007964 ORTHO05D010090 1.5e-28 129.8 138 56.5
Atru.chr13.1988 Acer truncatum HOM05D007964 ORTHO05D010090 2.0e-28 129.4 144 51.4
Thecc.08G162400 Theobroma cacao HOM05D007964 ORTHO05D010090 2.0e-28 129.4 136 51.5
Lsat_1_v5_gn_6_100061 Lactuca sativa HOM05D007964 ORTHO05D010090 3.4e-28 128.6 124 51.6
MELO3C019968.2 Cucumis melo HOM05D007964 ORTHO05D010090 4.5e-28 128.3 141 50.4
CsaV3_6G004920 Cucumis sativus L. HOM05D007964 ORTHO05D010090 5.9e-28 127.9 141 51.8
Haze_17821 Corylus avellana HOM05D007964 ORTHO05D010090 3.8e-27 125.2 138 52.2
Sabra05G0151100 Salix brachista HOM05D007964 ORTHO05D010090 1.1e-26 123.6 114 59.6
CiPaw.15G011700 Carya illinoinensis HOM05D007964 ORTHO05D010090 1.4e-26 123.2 130 52.3
ClCG08G007250 Citrullus lanatus HOM05D007964 ORTHO05D010090 2.5e-26 122.5 151 43.7
FvH4_2g12880 Fragaria vesca HOM05D007964 ORTHO05D010090 3.2e-26 122.1 131 54.2
FAN24G2710 Fragaria x ananassa HOM05D007964 ORTHO05D010090 3.2e-26 122.1 131 54.2
Manes.02G184300 Manihot esculenta HOM05D007964 ORTHO05D010090 3.2e-26 122.1 125 55.2
Rhsim06G0092800 Rhododendron simsii HOM05D007964 ORTHO05D010090 3.2e-26 122.1 117 52.1
Phvul.004G087600 Phaseolus vulgaris HOM05D007964 ORTHO05D010090 5.5e-26 121.3 133 51.1
Ciclev10003908m.g Citrus clementina HOM05D007964 ORTHO05D010090 2.1e-25 119.4 124 52.4
Ah.05g167820 Amaranthus hybridus HOM05D007964 ORTHO05D010090 4.7e-25 118.2 134 49.3
FAN20G1166 Fragaria x ananassa HOM05D007964 ORTHO05D010090 4.7e-25 118.2 131 52.7
Gorai.010G134000 Gossypium raimondii HOM05D007964 ORTHO05D010090 4.7e-25 118.2 138 51.4
EL10Ac1g01623 Beta vulgaris HOM05D007964 ORTHO05D010090 6.1e-25 117.9 124 51.6
Glyma.02G078400 Glycine max HOM05D007964 ORTHO05D010090 6.1e-25 117.9 130 45.4
Prupe.8G043200 Prunus persica HOM05D007964 ORTHO05D010090 6.1e-25 117.9 133 52.6
Gohir.D06G116200 Gossypium hirsutum HOM05D007964 ORTHO05D010090 7.9e-25 117.5 138 51.4
COL.COLO4_29112 Corchorus olitorius HOM05D007964 ORTHO05D010090 1.0e-24 117.1 136 45.6
FAN27G1192 Fragaria x ananassa HOM05D007964 ORTHO05D010090 1.0e-24 117.1 131 53.4
Gohir.A06G112000 Gossypium hirsutum HOM05D007964 ORTHO05D010090 1.0e-24 117.1 120 51.7
DCAR_001195 Daucus carota HOM05D007964 ORTHO05D010090 1.4e-24 116.7 94 59.6
Sed0009872 Sechium edule HOM05D007964 ORTHO05D010090 1.8e-24 116.3 146 46.6
Psat0s1172g0240 Pisum sativum HOM05D007964 ORTHO05D010090 2.3e-24 115.9 131 49.6
Medtr6g039830 Medicago truncatula HOM05D007964 ORTHO05D010090 3.0e-24 115.5 131 49.6
Sed0027049 Sechium edule HOM05D007964 ORTHO05D010090 3.0e-24 115.5 145 45.5
PGR042G2516 Punica granatum HOM05D007964 ORTHO05D010090 3.9e-24 115.2 132 50.0
Ca_04662_v3 Cicer arietinum L. HOM05D007964 ORTHO05D010090 2.0e-23 112.8 131 49.6
CANSAT25G1394 Cannabis sativa HOM05D007964 ORTHO05D010090 3.3e-23 112.1 117 51.3
Glyma.16G161400 Glycine max HOM05D007964 ORTHO05D010090 3.3e-23 112.1 134 43.3
Lalb_Chr19g0130001 Lupinus albus HOM05D007964 ORTHO05D010090 3.3e-23 112.1 130 49.2
RcHm_v2.0_Chr6g0273981 Rosa chinensis HOM05D007964 ORTHO05D010090 3.3e-23 112.1 131 51.9
Nn5g28859 Nelumbo nucifera HOM05D007964 ORTHO05D010090 1.3e-22 110.2 121 52.1
THA.LOC104810508 Tarenaya hassleriana HOM05D007964 ORTHO05D010090 1.8e-21 106.3 105 51.4
Aa31LG4G8900 Aethionema arabicum HOM05D007964 ORTHO05D010090 4.1e-21 105.1 143 46.2
AUR62026621 Chenopodium quinoa HOM05D007964 ORTHO05D010090 5.3e-21 104.8 127 48.0
AUR62034908 Chenopodium quinoa HOM05D007964 ORTHO05D010090 5.3e-21 104.8 127 47.2
Potri.002G062950 Populus trichocarpa HOM05D007964 ORTHO05D010090 1.5e-20 103.2 123 52.0
Aqoxy6G00437 Aquilegia oxysepala HOM05D007964 ORTHO05D010090 9.4e-18 94.0 126 44.4
BolC6t39631H Brassica oleracea HOM05D007964 ORTHO05D010090 2.3e-16 89.4 124 44.4
BcaC08g46600 Brassica carinata HOM05D007964 ORTHO05D010090 6.7e-16 87.8 130 42.3
C06p45790 Brassica napus HOM05D007964 ORTHO05D010090 6.7e-16 87.8 130 42.3
A07p37890 Brassica napus HOM05D007964 ORTHO05D010090 1.5e-15 86.7 121 43.8
BraA07t31354Z Brassica rapa HOM05D007964 ORTHO05D010090 2.0e-15 86.3 121 43.8
AT1G71740 Arabidopsis thaliana HOM05D007964 ORTHO05D010090 4.4e-15 85.1 130 39.2
Sp5g26770 Schrenkiella parvula HOM05D007964 ORTHO05D010090 2.8e-14 82.4 129 43.4
Carub.0002s1850 Capsella rubella HOM05D007964 ORTHO05D010090 4.8e-14 81.6 121 39.7
Os02g0210900 Oryza sativa ssp. japonica HOM05D007964 ORTHO05D010090 8.2e-14 80.9 116 41.4
CARHR291050 Cardamine hirsuta HOM05D007964 ORTHO05D010090 1.1e-13 80.5 113 43.4
AL2G31310 Arabidopsis lyrata HOM05D007964 ORTHO05D010090 1.4e-13 80.1 131 39.7
CSS0037942 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 2.4e-13 79.3 57 63.2
ATR1120G014 Amborella trichopoda HOM05D007964 ORTHO05D010090 7.0e-13 77.8 115 39.1
Thhalv10019796m.g Eutrema salsugineum HOM05D007964 ORTHO05D010090 2.6e-12 75.9 125 40.0
HPP92_000633 Vanilla planifolia HOM05D007964 ORTHO05D010090 3.2e-10 68.9 96 38.5
MSTRG.2266 Avicennia marina HOM05D002803 ORTHO05D003089 4.7e-09 65.1 117 34.2
Zm00001eb205370 Zea mays HOM05D007964 ORTHO05D010090 1.0e-08 63.9 67 44.8
MSTRG.813 Avicennia marina HOM05D002803 ORTHO05D003089 4.0e-08 62.0 136 33.1
Peaxi162Scf00367g00712 Petunia axillaris HOM05D002803 ORTHO05D003089 3.3e-07 58.9 132 31.1
unitig_52.g17150 Utricularia gibba HOM05D002803 ORTHO05D003089 4.4e-07 58.5 110 31.8
Cc11_g10690 Coffea canephora HOM05D002803 ORTHO05D003089 5.7e-07 58.2 50 48.0
Nn3g18213 Nelumbo nucifera HOM05D008294 ORTHO05D010468 5.7e-07 58.2 49 55.1
Ah.03g137920 Amaranthus hybridus HOM05D002803 ORTHO05D003089 7.5e-07 57.8 67 41.8
PGR102G2995 Punica granatum HOM05D002803 ORTHO05D003089 7.5e-07 57.8 64 46.9
Ah.02g127220 Amaranthus hybridus HOM05D002803 ORTHO05D003089 1.3e-06 57.0 122 34.4
ATR0053G026 Amborella trichopoda HOM05D002803 ORTHO05D003089 1.3e-06 57.0 62 41.9
EL10Ac6g14513 Beta vulgaris HOM05D002803 ORTHO05D003089 1.3e-06 57.0 56 48.2
Prupe.1G304400 Prunus persica HOM05D002803 ORTHO05D003089 1.7e-06 56.6 50 50.0
Actinidia38399 Actinidia chinensis HOM05D002803 ORTHO05D003089 2.2e-06 56.2 40 57.5
Oeu044623.1 Olea europaea HOM05D002803 ORTHO05D003089 2.2e-06 56.2 119 31.1
unitig_8.g3972 Utricularia gibba HOM05D002803 ORTHO05D003089 2.2e-06 56.2 107 34.6
SGA_v2.0_scaffold16G07882 Striga asiatica HOM05D002803 ORTHO05D003089 2.8e-06 55.8 46 52.2
Haze_17431 Corylus avellana HOM05D002803 ORTHO05D003089 3.7e-06 55.5 130 25.4
Dinv16513 Davidia involucrata HOM05D002803 ORTHO05D003089 3.7e-06 55.5 40 55.0
PSO135G0167 Papaver somniferum HOM05D002803 ORTHO05D003089 3.7e-06 55.5 42 52.4
Atru.chr13.2285 Acer truncatum HOM05D008294 ORTHO05D010468 4.8e-06 55.1 138 30.4
Nitab4.5_0000221g0090 Nicotiana tabacum HOM05D002803 ORTHO05D003089 4.8e-06 55.1 64 45.3
SGA_v2.0_scaffold59G20630 Striga asiatica HOM05D002803 ORTHO05D003089 4.8e-06 55.1 132 30.3
Cfa018638 Carpinus fangiana HOM05D002803 ORTHO05D003089 6.3e-06 54.7 40 55.0
Sabra10G0099500 Salix brachista HOM05D002803 ORTHO05D003089 6.3e-06 54.7 46 52.2
TAR374G0994 Trochodendron aralioides HOM05D002803 ORTHO05D003089 6.3e-06 54.7 40 52.5
TAR629G1495 Trochodendron aralioides HOM05D002803 ORTHO05D003089 6.3e-06 54.7 49 44.9
Cpa.g.sc682.2 Carica papaya HOM05D007501 ORTHO05D009528 8.2e-06 54.3 72 33.3
AUR62007738 Chenopodium quinoa HOM05D002803 ORTHO05D003089 8.2e-06 54.3 50 50.0
Migut.E00292 Erythranthe guttata HOM05D002803 ORTHO05D003089 8.2e-06 54.3 120 31.7
Nitab4.5_0007199g0010 Nicotiana tabacum HOM05D002803 ORTHO05D003089 8.2e-06 54.3 42 57.1


User provided reference genes

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