Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 7.2e-178 627.1 307 100.0
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 2.5e-175 618.6 307 98.4
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 1.7e-174 615.9 307 98.0
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 2.9e-171 605.1 307 95.8
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 1.4e-165 586.3 307 92.2
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 1.4e-149 533.1 307 81.1
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 4.1e-149 531.6 307 81.1
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 1.2e-148 530.0 307 81.4
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 6.5e-147 524.2 307 81.1
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 1.8e-144 516.2 307 78.8
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 2.3e-144 515.8 307 77.9
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 2.3e-144 515.8 307 79.2
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 4.0e-144 515.0 307 79.2
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 5.2e-144 514.6 307 78.5
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 6.8e-144 514.2 307 79.2
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 8.8e-144 513.8 307 78.8
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 1.2e-143 513.5 307 79.2
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 1.2e-143 513.5 307 79.5
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.5e-143 513.1 307 78.8
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 1.5e-143 513.1 307 77.9
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 2.0e-143 512.7 307 78.2
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 3.4e-143 511.9 307 78.5
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 3.4e-143 511.9 307 78.5
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 7.5e-143 510.8 307 77.9
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 9.8e-143 510.4 307 78.2
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 2.2e-142 509.2 307 77.9
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 2.8e-142 508.8 307 78.2
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 3.7e-142 508.4 307 77.9
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 6.3e-142 507.7 307 77.5
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 8.3e-142 507.3 307 77.2
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 1.1e-141 506.9 307 78.5
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 1.1e-141 506.9 307 77.2
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 1.4e-141 506.5 307 77.5
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 3.1e-141 505.4 307 77.9
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 5.4e-141 504.6 307 76.5
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 9.2e-141 503.8 278 88.5
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 2.0e-140 502.7 307 77.2
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 3.5e-140 501.9 358 69.0
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 1.3e-139 500.0 307 75.9
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 1.7e-139 499.6 307 76.9
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 2.3e-139 499.2 304 77.0
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 2.9e-139 498.8 307 77.5
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 3.8e-139 498.4 371 66.8
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 3.8e-139 498.4 307 75.6
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 6.6e-139 497.7 277 87.7
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 8.6e-139 497.3 307 76.9
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 4.3e-138 495.0 307 76.2
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 7.3e-138 494.2 307 76.5
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.2e-137 493.4 307 75.9
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 1.6e-137 493.0 307 76.2
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 2.8e-137 492.3 307 75.2
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 2.8e-137 492.3 307 75.2
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 8.0e-137 490.7 307 73.9
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 1.4e-136 490.0 307 76.2
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 4.0e-136 488.4 307 75.6
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 5.2e-136 488.0 307 76.2
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 8.9e-136 487.3 307 76.2
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 1.2e-135 486.9 307 74.9
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.0e-135 486.1 323 72.8
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 7.5e-135 484.2 307 75.9
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 2.9e-134 482.3 307 74.3
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 6.4e-134 481.1 307 72.3
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 6.4e-134 481.1 306 72.5
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 8.3e-134 480.7 288 78.1
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 8.3e-134 480.7 306 72.5
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.4e-133 479.9 307 73.0
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 1.8e-133 479.6 307 74.3
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 1.8e-133 479.6 307 73.6
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 5.4e-133 478.0 391 62.4
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 1.7e-131 473.0 370 63.8
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 3.9e-131 471.9 307 70.7
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 7.3e-130 467.6 307 70.4
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 1.6e-129 466.5 307 72.6
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 1.0e-128 463.8 277 79.8
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 4.7e-121 438.3 307 70.7
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 3.1e-120 435.6 306 70.6
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 8.9e-120 434.1 277 74.4
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 5.8e-119 431.4 276 74.3
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 1.7e-118 429.9 314 68.8
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 7.1e-117 424.5 293 71.0
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 4.4e-111 405.2 312 61.2
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 1.9e-109 399.8 243 78.6
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 7.1e-109 397.9 235 80.0
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 1.6e-108 396.7 307 61.6
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 3.6e-105 385.6 307 62.2
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 3.1e-104 382.5 306 57.5
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 4.2e-101 372.1 297 59.6
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.7e-99 366.7 236 73.3
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 2.2e-78 296.6 315 48.6
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 5.1e-75 285.4 190 68.4
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 2.5e-74 283.1 245 59.2
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 6.1e-60 235.3 310 42.6
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 2.6e-58 229.9 567 29.5
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 7.4e-58 228.4 148 75.0
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 1.8e-56 223.8 131 77.1
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.3e-54 217.6 170 68.8
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 2.2e-54 216.9 282 41.5
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.6e-23 114.4 223 32.3
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 6.6e-22 109.0 96 49.0
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 1.5e-21 107.8 71 66.2
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 7.3e-21 105.5 88 61.4
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 2.0e-15 87.4 72 58.3
COL.COLO4_34115 Corchorus olitorius HOM05D007381 ORTHO05D159467 7.8e-07 58.9 39 74.4


User provided reference genes

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