Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400024902 Solanum tuberosum HOM05D009853 ORTHO05D009969 7.8e-71 270.4 140 100.0
PGSC0003DMG400033092 Solanum tuberosum HOM05D009853 ORTHO05D009969 1.2e-63 246.5 131 94.7
PGSC0003DMG400026582 Solanum tuberosum HOM05D009853 ORTHO05D009969 1.5e-61 239.6 131 92.4
PGSC0003DMG400016835 Solanum tuberosum HOM05D009853 ORTHO05D009969 5.8e-58 227.6 131 88.5
PGSC0003DMG400016838 Solanum tuberosum HOM05D009853 ORTHO05D009969 7.1e-56 220.7 130 86.9
PGSC0003DMG400026881 Solanum tuberosum HOM05D009853 ORTHO05D009969 5.6e-53 211.1 132 85.6
PGSC0003DMG400036234 Solanum tuberosum HOM05D009853 ORTHO05D009969 3.1e-51 205.3 131 84.0
Solyc01g103870.1 Solanum lycopersicum HOM05D009853 ORTHO05D009969 1.1e-48 196.8 140 78.6
Solyc06g071300.1 Solanum lycopersicum HOM05D009853 ORTHO05D009969 1.7e-46 189.5 137 75.9
Sopen06g027600 Solanum pennellii HOM05D009853 ORTHO05D009969 2.3e-46 189.1 141 73.8
Sopen01g046240 Solanum pennellii HOM05D000600 ORTHO05D000432 1.2e-44 183.3 126 77.8
Sopen01g046270 Solanum pennellii HOM05D000600 ORTHO05D000432 2.1e-44 182.6 135 74.1
PGSC0003DMG400035438 Solanum tuberosum HOM05D009853 ORTHO05D009969 4.7e-44 181.4 104 86.5
CAN.G798.34 Capsicum annuum HOM05D009853 ORTHO05D009969 2.2e-41 172.6 131 70.2
PGSC0003DMG400039282 Solanum tuberosum HOM05D009853 ORTHO05D009969 6.4e-41 171.0 104 81.7
Nitab4.5_0029272g0020 Nicotiana tabacum HOM05D009853 ORTHO05D009969 1.5e-34 149.8 127 61.4
Nitab4.5_0000948g0200 Nicotiana tabacum HOM05D009853 ORTHO05D009969 2.6e-34 149.1 127 59.8
Peaxi162Scf00011g00077 Petunia axillaris HOM05D009853 ORTHO05D009969 4.5e-34 148.3 116 63.8
PGSC0003DMG400043439 Solanum tuberosum HOM05D009853 ORTHO05D009969 1.0e-22 110.5 71 80.3
Nitab4.5_0002698g0090 Nicotiana tabacum HOM05D009853 ORTHO05D009969 2.3e-22 109.4 90 62.2
Nitab4.5_0000075g0290 Nicotiana tabacum HOM05D009853 ORTHO05D009969 5.8e-18 94.7 108 46.3
Oeu029235.1 Olea europaea HOM05D011412 ORTHO05D009969 5.1e-14 81.6 137 38.7
Oeu029234.1 Olea europaea HOM05D011412 ORTHO05D009969 1.1e-13 80.5 137 38.7
Nitab4.5_0003774g0010 Nicotiana tabacum HOM05D038292 ORTHO05D009969 1.3e-12 77.0 101 40.6
Oeu031750.4 Olea europaea HOM05D041624 ORTHO05D009969 4.8e-12 75.1 119 33.6
Peaxi162Scf01312g00064 Petunia axillaris HOM05D000628 ORTHO05D009969 4.8e-12 75.1 77 49.4
Dinv30482 Davidia involucrata HOM05D009853 ORTHO05D009969 8.2e-12 74.3 145 35.9
Rhsim07G0189200 Rhododendron simsii HOM05D009853 ORTHO05D009969 4.1e-11 72.0 91 39.6
Solyc05g013370.1 Solanum lycopersicum HOM05D013339 ORTHO05D009969 6.9e-11 71.2 130 33.8
Actinidia20182 Actinidia chinensis HOM05D011412 ORTHO05D009969 1.5e-10 70.1 57 50.9
Oeu014492.1 Olea europaea HOM05D011412 ORTHO05D009969 4.5e-10 68.6 109 33.9
Oeu034504.1 Olea europaea HOM05D011412 ORTHO05D009969 5.9e-10 68.2 97 37.1
Sopen05g008160 Solanum pennellii HOM05D013339 ORTHO05D009969 1.0e-09 67.4 123 33.3
PGSC0003DMG400018623 Solanum tuberosum HOM05D013339 ORTHO05D009969 1.0e-09 67.4 130 33.1
Oeu029249.1 Olea europaea HOM05D011412 ORTHO05D009969 1.7e-09 66.6 101 37.6
Dinv38023 Davidia involucrata HOM05D011412 ORTHO05D009969 2.2e-09 66.2 145 33.8
Actinidia01760 Actinidia chinensis HOM05D006819 ORTHO05D008763 3.8e-09 65.5 75 44.0
vmacro23014 Vaccinium macrocarpon HOM05D011412 ORTHO05D009969 3.8e-09 65.5 78 42.3
CSS0019303 Camellia sinensis var. sinensis HOM05D009853 ORTHO05D009969 6.5e-09 64.7 93 35.5
Dinv40186 Davidia involucrata HOM05D009853 ORTHO05D009969 6.5e-09 64.7 83 39.8
Sabra10G0187100 Salix brachista HOM05D015295 ORTHO05D009969 8.5e-09 64.3 147 30.6
CSS0026794 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 1.4e-08 63.5 162 34.0
Rhsim08G0027100 Rhododendron simsii HOM05D011412 ORTHO05D009969 1.9e-08 63.2 136 34.6
PGSC0003DMG400007682 Solanum tuberosum HOM05D013339 ORTHO05D009969 2.5e-08 62.8 130 32.3
Oeu051266.1 Olea europaea HOM05D011412 ORTHO05D009969 4.2e-08 62.0 105 30.5
Potri.010G238900 Populus trichocarpa HOM05D015295 ORTHO05D009969 4.2e-08 62.0 134 34.3
Actinidia23430 Actinidia chinensis HOM05D006887 ORTHO05D009969 7.2e-08 61.2 115 33.9
CAN.G1238.8 Capsicum annuum HOM05D006716 ORTHO05D008396 7.2e-08 61.2 143 29.4
Oeu045757.1 Olea europaea HOM05D011412 ORTHO05D009969 9.3e-08 60.8 96 34.4
DCAR_007526 Daucus carota HOM05D009853 ORTHO05D009969 2.7e-07 59.3 96 39.6
Cfa015195 Carpinus fangiana HOM05D006887 ORTHO05D009969 4.6e-07 58.5 149 28.2
Oeu032519.1 Olea europaea HOM05D011412 ORTHO05D009969 4.6e-07 58.5 53 41.5
CSS0003429 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 6.1e-07 58.2 91 39.6
Oeu048605.1 Olea europaea HOM05D041624 ORTHO05D009969 6.1e-07 58.2 134 26.1
Oeu048608.1 Olea europaea HOM05D041624 ORTHO05D009969 6.1e-07 58.2 134 26.1
Potri.008G020300 Populus trichocarpa HOM05D015295 ORTHO05D009969 6.1e-07 58.2 63 42.9
BcaB06g27670 Brassica carinata HOM05D006887 ORTHO05D004325 7.9e-07 57.8 59 47.5
Rhsim08G0215000 Rhododendron simsii HOM05D011412 ORTHO05D009969 7.9e-07 57.8 107 33.6
CSS0020150 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 1.0e-06 57.4 79 40.5
CSS0039249 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 1.0e-06 57.4 79 40.5
TAR365G0201 Trochodendron aralioides HOM05D000307 ORTHO05D000166 1.0e-06 57.4 63 39.7
Oeu032521.1 Olea europaea HOM05D011412 ORTHO05D009969 1.3e-06 57.0 96 32.3
Thhalv10028184m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 1.8e-06 56.6 124 27.4
Thhalv10028282m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 1.8e-06 56.6 124 27.4
CSS0020566 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 2.3e-06 56.2 64 45.3
Haze_01459 Corylus avellana HOM05D006887 ORTHO05D009969 2.3e-06 56.2 156 29.5
AT5G39810 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 8.7e-06 54.3 109 33.9


User provided reference genes

Program Settings