Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400024835 Solanum tuberosum HOM05D000007 ORTHO05D000039 4.4e-67 257.7 119 100.0
Sopen04g026320 Solanum pennellii HOM05D000007 ORTHO05D000039 4.4e-59 231.1 114 91.2
PGSC0003DMG400024836 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.3e-58 229.6 116 88.8
PGSC0003DMG400024834 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.9e-58 228.4 113 91.2
Solyc04g063400.3 Solanum lycopersicum HOM05D000007 ORTHO05D000039 6.4e-58 227.3 114 89.5
Sopen04g026360 Solanum pennellii HOM05D000007 ORTHO05D000039 4.6e-56 221.1 113 87.6
Solyc04g063440.3 Solanum lycopersicum HOM05D000007 ORTHO05D000039 6.6e-55 217.2 113 86.7
Sopen00g010140 Solanum pennellii HOM05D000007 ORTHO05D000039 4.3e-54 214.5 113 85.0
Sopen04g026380 Solanum pennellii HOM05D000007 ORTHO05D000039 4.3e-54 214.5 113 85.0
Sopen04g026370 Solanum pennellii HOM05D000007 ORTHO05D000039 1.1e-52 209.9 113 83.2
Solyc04g063415.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 3.1e-52 208.4 113 82.3
Solyc04g064440.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 3.1e-52 208.4 113 82.3
Solyc04g064450.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 4.4e-51 204.5 113 80.5
CAN.G46.3 Capsicum annuum HOM05D000007 ORTHO05D000039 9.9e-51 203.4 112 79.5
PGSC0003DMG400024833 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.3e-47 193.0 102 86.3
Nitab4.5_0000174g0080 Nicotiana tabacum HOM05D000007 ORTHO05D000039 3.6e-45 184.9 114 72.8
Nitab4.5_0008120g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000039 6.2e-45 184.1 114 71.9
PGSC0003DMG400024829 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.3e-39 165.6 103 73.8
PGSC0003DMG400024825 Solanum tuberosum HOM05D000007 ORTHO05D000039 5.6e-38 161.0 99 71.7
Solyc04g064460.2 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.2e-35 153.3 109 63.3
PGSC0003DMG400038531 Solanum tuberosum HOM05D000007 ORTHO05D000039 6.5e-34 147.5 110 66.4
Sopen04g026420 Solanum pennellii HOM05D000007 ORTHO05D000039 3.2e-33 145.2 94 67.0
CAN.G46.1 Capsicum annuum HOM05D000007 ORTHO05D000039 7.1e-33 144.1 79 78.5
PGSC0003DMG400039355 Solanum tuberosum HOM05D000007 ORTHO05D000039 5.7e-30 134.4 98 68.4
PGSC0003DMG400037627 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.1e-29 132.5 98 68.4
Peaxi162Scf00066g01632 Petunia axillaris HOM05D000007 ORTHO05D000039 2.6e-27 125.6 106 55.7
Sopen04g026400 Solanum pennellii HOM05D000007 ORTHO05D000039 2.1e-24 115.9 91 65.9
Sopen04g026410 Solanum pennellii HOM05D000007 ORTHO05D000039 2.1e-24 115.9 105 58.1
PGSC0003DMG400045617 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.9e-22 109.4 92 51.1
Peaxi162Scf01439g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 5.7e-22 107.8 108 47.2
Solyc06g059810.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.6e-21 106.3 88 50.0
Nitab4.5_0006722g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.8e-21 105.5 110 45.5
Peaxi162Scf00033g00214 Petunia axillaris HOM05D000007 ORTHO05D000039 2.8e-21 105.5 107 48.6
Peaxi162Scf00033g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 2.4e-20 102.4 108 43.5
Nitab4.5_0013238g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.0e-19 99.4 99 47.5
Nitab4.5_0001530g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 4.5e-19 98.2 99 45.5
Nitab4.5_0001821g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.0e-18 97.1 106 44.3
Nitab4.5_0010416g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.3e-18 96.7 106 43.4
PGSC0003DMG400013031 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.8e-18 95.1 106 42.5
Nitab4.5_0000174g0110 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.4e-17 93.2 61 65.6
Lj7C597G11 Lonicera japonica HOM05D000007 ORTHO05D000039 3.2e-17 92.0 100 40.0
CAN.G319.8 Capsicum annuum HOM05D000007 ORTHO05D000039 4.2e-17 91.7 110 41.8
Peaxi162Scf00033g00031 Petunia axillaris HOM05D000007 ORTHO05D000039 2.7e-16 89.0 106 38.7
PGSC0003DMG400030753 Solanum tuberosum HOM05D000007 ORTHO05D000039 4.6e-16 88.2 108 39.8
Sopen06g019900 Solanum pennellii HOM05D000007 ORTHO05D000039 5.1e-15 84.7 102 39.2
PGSC0003DMG400030752 Solanum tuberosum HOM05D000007 ORTHO05D000039 5.1e-15 84.7 102 39.2
Peaxi162Scf00037g00084 Petunia axillaris HOM05D000007 ORTHO05D000039 1.1e-14 83.6 106 36.8
MSTRG.3214 Avicennia marina HOM05D000007 ORTHO05D000039 2.5e-14 82.4 103 42.7
SalBow1G6928 Salvia bowleyana HOM05D000007 ORTHO05D000039 2.2e-13 79.3 103 38.8
Sopen06g019890 Solanum pennellii HOM05D000007 ORTHO05D000039 1.4e-12 76.6 108 37.0
Dinv34988 Davidia involucrata HOM05D000007 ORTHO05D000039 1.8e-12 76.3 93 40.9
Dinv34982 Davidia involucrata HOM05D000007 ORTHO05D000039 2.4e-12 75.9 94 39.4
Nitab4.5_0020718g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 3.1e-12 75.5 48 66.7
Solyc06g059820.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 4.1e-12 75.1 108 36.1
Dinv06511 Davidia involucrata HOM05D000007 ORTHO05D000039 2.6e-11 72.4 97 41.2
Rhsim12G0135700 Rhododendron simsii HOM05D000298 ORTHO05D000039 3.4e-11 72.0 86 41.9
Cfa000498 Carpinus fangiana HOM05D000007 ORTHO05D000039 4.5e-11 71.6 97 36.1
Dinv34983 Davidia involucrata HOM05D000007 ORTHO05D000039 4.5e-11 71.6 94 38.3
Lj2A996T28 Lonicera japonica HOM05D000007 ORTHO05D000039 5.9e-11 71.2 87 41.4
Cfa000455 Carpinus fangiana HOM05D000007 ORTHO05D000039 7.7e-11 70.9 97 35.1
Lj2P997T15 Lonicera japonica HOM05D000007 ORTHO05D000039 1.7e-10 69.7 112 32.1
Nitab4.5_0006627g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.7e-10 69.7 102 37.3
Cfa000444 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.8e-10 68.6 103 33.0
Lj3C660T6 Lonicera japonica HOM05D000007 ORTHO05D000039 5.0e-10 68.2 117 34.2
Lj5C836T3 Lonicera japonica HOM05D000007 ORTHO05D000039 8.5e-10 67.4 116 32.8
Lj5C836T5 Lonicera japonica HOM05D000007 ORTHO05D000039 1.1e-09 67.0 107 34.6
Cfa000440 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.5e-09 65.9 93 34.4
Cfa000449 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.2e-09 65.5 93 35.5
Cfa000501 Carpinus fangiana HOM05D000007 ORTHO05D000039 4.2e-09 65.1 91 38.5
Nitab4.5_0000195g0070 Nicotiana tabacum HOM05D000007 ORTHO05D000039 4.2e-09 65.1 87 37.9
Lj5C842T1 Lonicera japonica HOM05D000007 ORTHO05D000039 1.6e-08 63.2 89 36.0
Lj6C102T0 Lonicera japonica HOM05D000007 ORTHO05D000039 1.6e-08 63.2 90 36.7
Cfa000500 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.1e-08 62.8 95 35.8
Potri.005G114900 Populus trichocarpa HOM05D000007 ORTHO05D000039 2.7e-08 62.4 90 35.6
Cfa000443 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.6e-08 62.0 93 34.4
Cfa000452 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.6e-08 62.0 93 33.3
Lj2C989T3 Lonicera japonica HOM05D000007 ORTHO05D000039 3.6e-08 62.0 120 34.2
Peaxi162Scf00658g00066 Petunia axillaris HOM05D000007 ORTHO05D000039 3.6e-08 62.0 90 38.9
Cfa000495 Carpinus fangiana HOM05D000007 ORTHO05D000039 4.7e-08 61.6 91 38.5
Cfa000499 Carpinus fangiana HOM05D000007 ORTHO05D000039 4.7e-08 61.6 91 37.4
Ciclev10026927m.g Citrus clementina HOM05D000007 ORTHO05D000039 4.7e-08 61.6 86 37.2
Ciclev10027421m.g Citrus clementina HOM05D000007 ORTHO05D000039 6.1e-08 61.2 109 35.8
PGSC0003DMG400003729 Solanum tuberosum HOM05D000007 ORTHO05D000039 6.1e-08 61.2 93 35.5
Lj5C813T2 Lonicera japonica HOM05D000007 ORTHO05D000039 1.0e-07 60.5 90 35.6
Peaxi162Scf00658g00067 Petunia axillaris HOM05D000007 ORTHO05D000039 1.0e-07 60.5 88 36.4
PGSC0003DMG400005153 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.0e-07 60.5 96 35.4
Lj2C989T8 Lonicera japonica HOM05D000007 ORTHO05D000039 1.4e-07 60.1 121 33.9
Peaxi162Scf00033g00025 Petunia axillaris HOM05D000007 ORTHO05D000039 1.8e-07 59.7 51 47.1
Cfa000454 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.3e-07 59.3 97 30.9
Peaxi162Scf00016g00259 Petunia axillaris HOM05D000007 ORTHO05D000039 3.0e-07 58.9 97 37.1
Peaxi162Scf00700g00039 Petunia axillaris HOM05D000007 ORTHO05D000039 3.0e-07 58.9 101 33.7
Cfa000453 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.9e-07 58.5 92 30.4
COL.COLO4_22623 Corchorus olitorius HOM05D000007 ORTHO05D000039 3.9e-07 58.5 87 35.6
Lj7P401T34 Lonicera japonica HOM05D000007 ORTHO05D000039 3.9e-07 58.5 109 30.3
Peaxi162Scf00803g00055 Petunia axillaris HOM05D000007 ORTHO05D000039 3.9e-07 58.5 92 34.8
Peaxi162Scf01075g00018 Petunia axillaris HOM05D000007 ORTHO05D000039 3.9e-07 58.5 89 37.1
Ciclev10027079m.g Citrus clementina HOM05D000007 ORTHO05D000039 5.1e-07 58.2 86 40.7
Peaxi162Scf00803g00535 Petunia axillaris HOM05D000007 ORTHO05D000039 5.1e-07 58.2 92 34.8
PGSC0003DMG400043031 Solanum tuberosum HOM05D000007 ORTHO05D000039 5.1e-07 58.2 90 37.8
Ah.01g006770 Amaranthus hybridus HOM05D000007 ORTHO05D000039 6.7e-07 57.8 88 37.5
Duzib114G0469 Durio zibethinus HOM05D000007 ORTHO05D000039 6.7e-07 57.8 85 34.1
PGSC0003DMG400017422 Solanum tuberosum HOM05D000007 ORTHO05D000039 8.8e-07 57.4 95 31.6
Peaxi162Scf01571g00011 Petunia axillaris HOM05D000007 ORTHO05D000039 1.1e-06 57.0 92 33.7
PGSC0003DMG400024831 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.1e-06 57.0 43 65.1
PGSC0003DMG400019996 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.5e-06 56.6 95 30.5
Duzib114G0761 Durio zibethinus HOM05D000007 ORTHO05D000039 5.7e-06 54.7 86 32.6


User provided reference genes

Program Settings