Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400024811 Solanum tuberosum HOM05D003899 ORTHO05D003655 9.3e-72 273.9 186 100.0
PGSC0003DMG400024810 Solanum tuberosum HOM05D003899 ORTHO05D003655 3.0e-46 189.1 113 85.0
Solyc07g045590.1 Solanum lycopersicum HOM05D003899 ORTHO05D003655 9.7e-45 184.1 113 83.2
Solyc03g033280.1 Solanum lycopersicum HOM05D003899 ORTHO05D003655 4.1e-43 178.7 113 81.4
CAN.G1012.7 Capsicum annuum HOM05D003899 ORTHO05D003655 1.7e-36 156.8 113 74.3
Solyc03g033290.1 Solanum lycopersicum HOM05D003899 ORTHO05D003655 2.0e-34 149.8 146 67.1
Nitab4.5_0004770g0030 Nicotiana tabacum HOM05D003899 ORTHO05D003655 4.2e-32 142.1 185 64.3
Nitab4.5_0000299g0020 Nicotiana tabacum HOM05D003899 ORTHO05D003655 4.0e-30 135.6 185 61.6
Peaxi162Scf00263g00033 Petunia axillaris HOM05D003899 ORTHO05D003655 8.3e-28 127.9 184 65.2
Nitab4.5_0002974g0030 Nicotiana tabacum HOM05D003899 ORTHO05D003655 4.4e-21 105.5 109 60.6
Nitab4.5_0015327g0010 Nicotiana tabacum HOM05D003899 ORTHO05D003655 1.8e-19 100.1 97 60.8
CAN.G833.2 Capsicum annuum HOM05D003899 ORTHO05D003655 5.2e-14 82.0 64 57.8
PGSC0003DMG400030777 Solanum tuberosum HOM05D003899 ORTHO05D003655 2.0e-13 80.1 115 46.1
ClCG08G006450 Citrullus lanatus HOM05D000058 ORTHO05D000077 4.4e-13 79.0 103 43.7
Sopen06g019720 Solanum pennellii HOM05D003899 ORTHO05D003655 2.9e-12 76.3 115 44.3
CsaV3_6G030980 Cucumis sativus L. HOM05D003899 ORTHO05D003655 4.9e-12 75.5 108 44.4
PGSC0003DMG400030778 Solanum tuberosum HOM05D003899 ORTHO05D003655 6.4e-12 75.1 87 48.3
MELO3C027328.2 Cucumis melo HOM05D003899 ORTHO05D003655 1.4e-11 73.9 101 44.6
FAN15G3500 Fragaria x ananassa HOM05D003899 ORTHO05D003655 7.0e-11 71.6 82 54.9
Sed0026893 Sechium edule HOM05D003899 ORTHO05D003655 9.2e-11 71.2 82 50.0
FAN20G0153 Fragaria x ananassa HOM05D003899 ORTHO05D003655 2.7e-10 69.7 85 51.8
FvH4_2g14670 Fragaria vesca HOM05D003899 ORTHO05D003655 7.8e-10 68.2 89 49.4
FAN24G0119 Fragaria x ananassa HOM05D003899 ORTHO05D003655 7.8e-10 68.2 89 49.4
BcaB07g33974 Brassica carinata HOM05D003899 ORTHO05D003655 1.0e-09 67.8 79 49.4
CAN.G833.1 Capsicum annuum HOM05D003899 ORTHO05D003655 1.0e-09 67.8 67 52.2
COL.COLO4_08943 Corchorus olitorius HOM05D003899 ORTHO05D003655 2.3e-09 66.6 90 43.3
Peaxi162Scf00033g00086 Petunia axillaris HOM05D003899 ORTHO05D003655 6.6e-09 65.1 50 60.0
Solyc06g054660.1 Solanum lycopersicum HOM05D003899 ORTHO05D003655 1.5e-08 63.9 113 42.5
CANSAT25G0207 Cannabis sativa HOM05D003899 ORTHO05D003655 3.3e-08 62.8 108 38.0
Gohir.A02G066500 Gossypium hirsutum HOM05D003899 ORTHO05D003655 4.3e-08 62.4 113 39.8
RcHm_v2.0_Chr6g0277141 Rosa chinensis HOM05D003899 ORTHO05D003655 4.3e-08 62.4 81 50.6
TWI32G0122 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 4.3e-08 62.4 184 40.2
MSTRG.1375 Avicennia marina HOM05D003899 ORTHO05D003655 5.6e-08 62.0 113 41.6
A10p07750 Brassica napus HOM05D003899 ORTHO05D003655 7.3e-08 61.6 77 46.8
BolC6t35162H Brassica oleracea HOM05D003899 ORTHO05D003655 7.3e-08 61.6 88 43.2
BraSC36t46027Z Brassica rapa HOM05D003899 ORTHO05D003655 7.3e-08 61.6 77 46.8
Thhalv10012331m.g Eutrema salsugineum HOM05D003899 ORTHO05D003655 7.3e-08 61.6 86 45.3
Migut.N03236 Erythranthe guttata HOM05D003899 ORTHO05D003655 9.5e-08 61.2 112 36.6
Lsat_1_v5_gn_5_108760 Lactuca sativa HOM05D003899 ORTHO05D003655 9.5e-08 61.2 92 35.9
Sp1g32910 Schrenkiella parvula HOM05D003899 ORTHO05D003655 9.5e-08 61.2 82 46.3
Actinidia06640 Actinidia chinensis HOM05D003899 ORTHO05D003655 1.2e-07 60.8 108 35.2
Cfa018365 Carpinus fangiana HOM05D003899 ORTHO05D003655 2.1e-07 60.1 114 41.2
Prupe.8G018800 Prunus persica HOM05D003899 ORTHO05D003655 2.1e-07 60.1 105 42.9
AT1G43790 Arabidopsis thaliana HOM05D003899 ORTHO05D003655 2.8e-07 59.7 88 44.3
Rhsim10G0136200 Rhododendron simsii HOM05D003899 ORTHO05D003655 3.6e-07 59.3 79 44.3
RhsimUnG0132700 Rhododendron simsii HOM05D003899 ORTHO05D003655 3.6e-07 59.3 79 44.3
AL1G51910 Arabidopsis lyrata HOM05D003899 ORTHO05D003655 4.7e-07 58.9 88 43.2
Thecc.01G128000 Theobroma cacao HOM05D003899 ORTHO05D003655 4.7e-07 58.9 107 37.4
Dinv24330 Davidia involucrata HOM05D003899 ORTHO05D003655 8.0e-07 58.2 113 32.7
Atru.chr4.839 Acer truncatum HOM05D003899 ORTHO05D003655 1.1e-06 57.8 113 38.9
Lsat_1_v5_gn_9_107661 Lactuca sativa HOM05D003899 ORTHO05D003655 1.1e-06 57.8 92 35.9
COL.COLO4_14024 Corchorus olitorius HOM05D003899 ORTHO05D003655 1.4e-06 57.4 95 38.9
Haze_17704 Corylus avellana HOM05D003899 ORTHO05D003655 1.4e-06 57.4 113 35.4
Thecc.08G144600 Theobroma cacao HOM05D003899 ORTHO05D003655 1.4e-06 57.4 139 49.6
BcaC08g42822 Brassica carinata HOM05D003899 ORTHO05D003655 2.3e-06 56.6 79 44.3
Duzib041G0166 Durio zibethinus HOM05D003899 ORTHO05D003655 2.3e-06 56.6 189 39.2
MD05G1014900 Malus domestica HOM05D003899 ORTHO05D003655 2.3e-06 56.6 105 39.0
Oeu030532.1 Olea europaea HOM05D003899 ORTHO05D003655 2.3e-06 56.6 86 37.2
QL06p029227 Quercus lobata HOM05D003899 ORTHO05D003655 2.3e-06 56.6 73 47.9
CARHR035480 Cardamine hirsuta HOM05D003899 ORTHO05D003655 3.1e-06 56.2 77 45.5
Gohir.A11G224804 Gossypium hirsutum HOM05D003899 ORTHO05D003655 3.1e-06 56.2 105 41.0
Lsat_1_v5_gn_5_108780 Lactuca sativa HOM05D003899 ORTHO05D003655 3.1e-06 56.2 92 34.8
PGR044G0858 Punica granatum HOM05D003899 ORTHO05D003655 4.0e-06 55.8 73 50.7
C06p00330 Brassica napus HOM05D003899 ORTHO05D003655 5.2e-06 55.5 88 42.0
HanXRQChr04g0125201 Helianthus annuus HOM05D003899 ORTHO05D003655 5.2e-06 55.5 74 43.2
Dinv25809 Davidia involucrata HOM05D003899 ORTHO05D003655 6.8e-06 55.1 74 43.2
Manes.12G153900 Manihot esculenta HOM05D003899 ORTHO05D003655 8.9e-06 54.7 108 35.2
QL02p025320 Quercus lobata HOM05D003899 ORTHO05D003655 8.9e-06 54.7 95 36.8


User provided reference genes

Program Settings