Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400024641 Solanum tuberosum HOM05D000289 ORTHO05D397634 2.2e-51 205.3 100 100.0
PGSC0003DMG400019959 Solanum tuberosum HOM05D000289 ORTHO05D000208 7.6e-12 73.9 43 90.7
Solyc03g007740.3 Solanum lycopersicum HOM05D000289 ORTHO05D000208 4.9e-11 71.2 43 86.0
Sopen03g003660 Solanum pennellii HOM05D000289 ORTHO05D000208 4.9e-11 71.2 43 86.0
Nitab4.5_0001748g0080 Nicotiana tabacum HOM05D000289 ORTHO05D000208 5.5e-10 67.8 43 81.4
Nitab4.5_0008026g0010 Nicotiana tabacum HOM05D000289 ORTHO05D000208 5.5e-10 67.8 43 81.4
Peaxi162Scf00057g00024 Petunia axillaris HOM05D000289 ORTHO05D000208 4.6e-09 64.7 43 74.4
PGSC0003DMG402028903 Solanum tuberosum HOM05D000289 ORTHO05D000208 1.3e-08 63.2 43 72.1
Cc02_g02180 Coffea canephora HOM05D000289 ORTHO05D000208 2.3e-08 62.4 43 69.8
DCAR_020288 Daucus carota HOM05D000289 ORTHO05D000208 2.3e-08 62.4 43 69.8
MSTRG.27067 Avicennia marina HOM05D000289 ORTHO05D000208 6.7e-08 60.8 43 67.4
Peaxi162Scf00618g00632 Petunia axillaris HOM05D000289 ORTHO05D000208 6.7e-08 60.8 43 67.4
Solyc06g036430.3 Solanum lycopersicum HOM05D000289 ORTHO05D000208 6.7e-08 60.8 43 69.8
Sopen06g012170 Solanum pennellii HOM05D000289 ORTHO05D000208 6.7e-08 60.8 43 69.8
HanXRQChr10g0296541 Helianthus annuus HOM05D000289 ORTHO05D000208 1.5e-07 59.7 60 51.7
Nitab4.5_0008514g0010 Nicotiana tabacum HOM05D000289 ORTHO05D000208 1.5e-07 59.7 43 67.4
ECA232G3177 Erigeron canadensis HOM05D000289 ORTHO05D000208 1.9e-07 59.3 43 72.1
HanXRQChr14g0448951 Helianthus annuus HOM05D000289 ORTHO05D000208 1.9e-07 59.3 43 69.8
Lsat_1_v5_gn_9_57040 Lactuca sativa HOM05D000289 ORTHO05D000208 2.5e-07 58.9 43 72.1
CAN.G926.3 Capsicum annuum HOM05D000289 ORTHO05D000208 3.3e-07 58.5 43 67.4
Dinv35288 Davidia involucrata HOM05D000289 ORTHO05D000208 4.3e-07 58.2 43 69.8
SGA_v2.0_scaffold10G05274 Striga asiatica HOM05D000289 ORTHO05D000208 4.3e-07 58.2 43 60.5
MSTRG.8483 Avicennia marina HOM05D000289 ORTHO05D000208 5.7e-07 57.8 52 51.9
Oeu009286.1 Olea europaea HOM05D000289 ORTHO05D000208 5.7e-07 57.8 48 58.3
Oeu037134.1 Olea europaea HOM05D000289 ORTHO05D000208 5.7e-07 57.8 43 65.1
HanXRQChr10g0301591 Helianthus annuus HOM05D000289 ORTHO05D000208 7.4e-07 57.4 43 67.4
SGA_v2.0_scaffold192G40610 Striga asiatica HOM05D000289 ORTHO05D000208 7.4e-07 57.4 43 62.8
Dinv28364 Davidia involucrata HOM05D000289 ORTHO05D000208 9.6e-07 57.0 43 69.8
vmacro06600 Vaccinium macrocarpon HOM05D000289 ORTHO05D000208 9.6e-07 57.0 43 65.1
Hma1.2p1_0216F.1_g091220 Hydrangea macrophylla HOM05D000289 ORTHO05D000208 1.6e-06 56.2 52 55.8
Nn7g37312 Nelumbo nucifera HOM05D000289 ORTHO05D000208 2.1e-06 55.8 54 51.9
Oeu036896.1 Olea europaea HOM05D000289 ORTHO05D000208 2.1e-06 55.8 43 62.8
Rhsim03G0195600 Rhododendron simsii HOM05D000289 ORTHO05D000208 2.8e-06 55.5 42 64.3
Rhsim09G0202400 Rhododendron simsii HOM05D000289 ORTHO05D000208 2.8e-06 55.5 42 61.9
Thecc.03G188000 Theobroma cacao HOM05D000289 ORTHO05D000208 3.7e-06 55.1 48 60.4
Duzib205G0145 Durio zibethinus HOM05D000289 ORTHO05D000208 6.2e-06 54.3 48 60.4
HanXRQChr06g0166981 Helianthus annuus HOM05D000289 ORTHO05D000208 6.2e-06 54.3 53 50.9
MSTRG.69 Avicennia marina HOM05D000289 ORTHO05D000208 8.2e-06 53.9 43 60.5


User provided reference genes

Program Settings