Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400024621 Solanum tuberosum HOM05D007687 ORTHO05D009692 1.1e-125 453.4 237 100.0
Solyc03g114770.3 Solanum lycopersicum HOM05D007687 ORTHO05D009692 4.6e-100 368.2 237 84.4
CAN.G982.38 Capsicum annuum HOM05D007687 ORTHO05D009692 1.3e-99 366.7 238 79.0
Sopen03g033850 Solanum pennellii HOM05D007687 ORTHO05D009692 1.1e-96 357.1 238 82.8
Peaxi162Scf00017g03282 Petunia axillaris HOM05D007687 ORTHO05D009692 2.8e-73 279.3 242 59.9
Nitab4.5_0002467g0050 Nicotiana tabacum HOM05D007687 ORTHO05D009692 8.5e-70 267.7 239 61.5
Nitab4.5_0005994g0030 Nicotiana tabacum HOM05D007687 ORTHO05D009692 1.3e-49 200.7 238 50.8
Oeu044771.1 Olea europaea HOM05D007687 ORTHO05D009692 1.1e-24 117.9 207 41.1
QL10p020735 Quercus lobata HOM05D007687 ORTHO05D009692 7.1e-24 115.2 246 34.6
Thecc.03G108300 Theobroma cacao HOM05D007687 ORTHO05D009692 2.5e-21 106.7 233 36.1
Manes.14G089000 Manihot esculenta HOM05D007687 ORTHO05D009692 5.6e-21 105.5 243 33.3
TAR629G0229 Trochodendron aralioides HOM05D007687 ORTHO05D009692 2.4e-19 100.1 241 33.6
Duzib084G0111 Durio zibethinus HOM05D007687 ORTHO05D009692 1.5e-18 97.4 243 35.0
Duzib068G1012 Durio zibethinus HOM05D007687 ORTHO05D009692 4.4e-18 95.9 213 34.7
Actinidia10442 Actinidia chinensis HOM05D007687 ORTHO05D009692 2.9e-17 93.2 223 31.4
Potri.015G048600 Populus trichocarpa HOM05D007687 ORTHO05D009692 4.9e-17 92.4 237 34.6
Cc04_g08290 Coffea canephora HOM05D007687 ORTHO05D009692 6.4e-17 92.0 248 35.9
COL.COLO4_27494 Corchorus olitorius HOM05D000180 ORTHO05D009692 5.4e-16 89.0 255 36.1
Nn4g23535 Nelumbo nucifera HOM05D007687 ORTHO05D009692 9.3e-16 88.2 206 35.4
Duzib205G1319 Durio zibethinus HOM05D007687 ORTHO05D009692 1.2e-15 87.8 228 34.2
CiPaw.15G114100 Carya illinoinensis HOM05D007687 ORTHO05D009692 6.0e-15 85.5 234 32.9
Ciclev10024235m.g Citrus clementina HOM05D007687 ORTHO05D009692 7.8e-15 85.1 195 34.9
Sabra15G0078700 Salix brachista HOM05D007687 ORTHO05D009692 3.0e-14 83.2 187 38.5
Lj5A137T61 Lonicera japonica HOM05D007687 ORTHO05D009692 3.6e-12 76.3 179 36.3
Rhsim01G0212900 Rhododendron simsii HOM05D006174 ORTHO05D007987 3.6e-12 76.3 183 32.2
Sed0010577 Sechium edule HOM05D007687 ORTHO05D009692 4.8e-12 75.9 231 32.9
Ca_21756_v3 Cicer arietinum L. HOM05D007687 ORTHO05D009692 2.4e-11 73.6 195 33.8
Manes.06G080900 Manihot esculenta HOM05D007687 ORTHO05D009692 4.0e-11 72.8 195 32.3
Dinv07975 Davidia involucrata HOM05D007687 ORTHO05D009692 5.3e-11 72.4 113 38.9
Cfa016835 Carpinus fangiana HOM05D007687 ORTHO05D009692 1.2e-10 71.2 216 30.6
MD14G1216500 Malus domestica HOM05D007687 ORTHO05D009692 1.5e-10 70.9 299 27.8
TWI60G1328 Tripterygium wilfordii HOM05D007687 ORTHO05D009692 1.5e-10 70.9 186 30.6
Prupe.5G209900 Prunus persica HOM05D007687 ORTHO05D009692 2.6e-10 70.1 247 30.4
Gorai.006G268500 Gossypium raimondii HOM05D007687 ORTHO05D009692 5.8e-10 68.9 202 32.2
CsaV3_1G006250 Cucumis sativus L. HOM05D007687 ORTHO05D009692 7.6e-10 68.6 256 27.0
PGR031G0897 Punica granatum HOM05D007687 ORTHO05D009692 9.9e-10 68.2 167 28.7
Glyma.17G081600 Glycine max HOM05D007687 ORTHO05D009692 1.3e-09 67.8 237 29.1
Aa31LG11G2410 Aethionema arabicum HOM05D007687 ORTHO05D009692 2.2e-09 67.0 161 34.8
Medtr2g461550 Medicago truncatula HOM05D007687 ORTHO05D009692 2.9e-09 66.6 213 31.0
CANSAT56G0292 Cannabis sativa HOM05D007687 ORTHO05D009692 8.4e-09 65.1 197 29.9
CANSAT56G1485 Cannabis sativa HOM05D007687 ORTHO05D009692 1.4e-08 64.3 197 29.9
Medtr4g109950 Medicago truncatula HOM05D007687 ORTHO05D009692 1.9e-08 63.9 163 30.7
Gohir.A09G243800 Gossypium hirsutum HOM05D007687 ORTHO05D009692 2.4e-08 63.5 198 31.3
BolC7t44987H Brassica oleracea HOM05D007687 ORTHO05D009692 7.1e-08 62.0 163 30.7
Thhalv10004801m.g Eutrema salsugineum HOM05D007687 ORTHO05D009692 7.1e-08 62.0 168 29.2
ClCG04G011570 Citrullus lanatus HOM05D007687 ORTHO05D009692 9.3e-08 61.6 194 28.9
BcaNung02611 Brassica carinata HOM05D007687 ORTHO05D009692 1.2e-07 61.2 163 30.7
C07p44640 Brassica napus HOM05D007687 ORTHO05D009692 1.2e-07 61.2 163 30.7
Glyma.05G018400 Glycine max HOM05D007687 ORTHO05D009692 1.2e-07 61.2 206 30.1
Phvul.003G182300 Phaseolus vulgaris HOM05D007687 ORTHO05D009692 1.2e-07 61.2 243 28.8
FvH4_5g13402 Fragaria vesca HOM05D007687 ORTHO05D009692 4.6e-07 59.3 193 31.1
FAN18G0959 Fragaria x ananassa HOM05D007687 ORTHO05D009692 4.6e-07 59.3 193 31.1
Lj4g0013896 Lotus japonicus HOM05D007687 ORTHO05D009692 4.6e-07 59.3 204 30.4
SGA_v2.0_scaffold105G30431 Striga asiatica HOM05D007687 ORTHO05D009692 1.0e-06 58.2 160 33.1
unitig_578.g15936 Utricularia gibba HOM05D007687 ORTHO05D009692 1.7e-06 57.4 155 32.9
Actinidia04796 Actinidia chinensis HOM05D007687 ORTHO05D009692 2.3e-06 57.0 175 24.6
Aqoxy7G00617 Aquilegia oxysepala HOM05D035011 ORTHO05D031291 3.0e-06 56.6 168 30.4
Sp2g24190 Schrenkiella parvula HOM05D007687 ORTHO05D009692 3.0e-06 56.6 200 29.0
unitig_8.g4497 Utricularia gibba HOM05D007687 ORTHO05D009692 3.9e-06 56.2 172 30.8
BcaB04g19894 Brassica carinata HOM05D007687 ORTHO05D009692 5.1e-06 55.8 162 29.0
FAN08G0723 Fragaria x ananassa HOM05D007687 ORTHO05D009692 5.1e-06 55.8 194 33.0
VMungo1215G2041 Vigna mungo HOM05D007687 ORTHO05D009692 6.6e-06 55.5 199 29.1
BcaC04g23476 Brassica carinata HOM05D007687 ORTHO05D009692 8.7e-06 55.1 160 28.1


User provided reference genes

Program Settings