Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400024586 Solanum tuberosum HOM05D006272 ORTHO05D007989 2.0e-121 439.1 219 100.0
Solyc03g113990.3 Solanum lycopersicum HOM05D006272 ORTHO05D007989 1.3e-112 409.8 219 93.6
Sopen03g033040 Solanum pennellii HOM05D006272 ORTHO05D007989 1.3e-109 399.8 217 93.1
CAN.G2099.3 Capsicum annuum HOM05D006272 ORTHO05D007989 1.1e-100 370.2 227 85.5
Nitab4.5_0006432g0010 Nicotiana tabacum HOM05D006272 ORTHO05D007989 1.2e-86 323.6 221 76.9
Peaxi162Scf00017g02427 Petunia axillaris HOM05D006272 ORTHO05D007989 1.5e-84 316.6 223 75.8
Nitab4.5_0001422g0120 Nicotiana tabacum HOM05D006272 ORTHO05D007989 1.9e-79 299.7 192 79.2
MSTRG.4383 Avicennia marina HOM05D006272 ORTHO05D007989 2.5e-76 289.3 224 67.9
Rhsim12G0162200 Rhododendron simsii HOM05D006272 ORTHO05D007989 1.6e-75 286.6 211 69.7
Migut.D01790 Erythranthe guttata HOM05D006272 ORTHO05D007989 2.8e-75 285.8 221 67.0
Oeu041583.1 Olea europaea HOM05D006272 ORTHO05D007989 3.6e-75 285.4 199 73.4
vmacro16592 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 1.5e-73 280.0 233 63.9
QL10p013391 Quercus lobata HOM05D006272 ORTHO05D007989 3.4e-73 278.9 211 67.3
Cc04_g13100 Coffea canephora HOM05D006272 ORTHO05D007989 4.5e-73 278.5 224 63.4
CSS0043549 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 9.9e-73 277.3 227 67.0
Haze_07447 Corylus avellana HOM05D006272 ORTHO05D007989 9.9e-73 277.3 221 66.1
Actinidia19083 Actinidia chinensis HOM05D006272 ORTHO05D007989 2.9e-72 275.8 222 68.0
Glyma.06G185200 Glycine max HOM05D006272 ORTHO05D007989 2.9e-72 275.8 228 63.6
VMungo1309G0353 Vigna mungo HOM05D006272 ORTHO05D007989 2.9e-72 275.8 225 64.0
Eucgr.B00343 Eucalyptus grandis HOM05D006272 ORTHO05D007989 4.9e-72 275.0 223 66.4
Prupe.5G178100 Prunus persica HOM05D006272 ORTHO05D007989 4.9e-72 275.0 223 62.8
Lalb_Chr23g0273081 Lupinus albus HOM05D006272 ORTHO05D007989 8.4e-72 274.2 220 63.6
Ca_16206_v3 Cicer arietinum L. HOM05D006272 ORTHO05D007989 1.9e-71 273.1 228 63.6
CiPaw.12G023800 Carya illinoinensis HOM05D006272 ORTHO05D007989 4.2e-71 271.9 214 66.8
Duzib205G0574 Durio zibethinus HOM05D006272 ORTHO05D007989 5.5e-71 271.6 225 64.9
Glyma.04G179400 Glycine max HOM05D006272 ORTHO05D007989 5.5e-71 271.6 226 65.0
Manes.14G069600 Manihot esculenta HOM05D006272 ORTHO05D007989 7.1e-71 271.2 210 65.7
MD06G1180000 Malus domestica HOM05D006272 ORTHO05D007989 9.3e-71 270.8 226 63.7
Lj5A121G99 Lonicera japonica HOM05D006272 ORTHO05D007989 2.7e-70 269.2 192 71.4
MD14G1185400 Malus domestica HOM05D006272 ORTHO05D007989 3.5e-70 268.9 213 65.3
GSVIVG01007814001 Vitis vinifera HOM05D006272 ORTHO05D007989 4.6e-70 268.5 174 78.2
Phvul.009G181400 Phaseolus vulgaris HOM05D006272 ORTHO05D007989 6.0e-70 268.1 225 63.1
Potri.015G072000 Populus trichocarpa HOM05D006272 ORTHO05D007989 1.0e-69 267.3 200 66.5
TPR.G15079 Trifolium pratense HOM05D006272 ORTHO05D007989 1.0e-69 267.3 231 60.2
Gohir.A03G017300 Gossypium hirsutum HOM05D006272 ORTHO05D007989 3.0e-69 265.8 211 65.9
Lj1g0014498 Lotus japonicus HOM05D006272 ORTHO05D007989 3.9e-69 265.4 220 63.2
Gohir.D03G150700 Gossypium hirsutum HOM05D006272 ORTHO05D007989 5.1e-69 265.0 190 70.0
Medtr3g078320 Medicago truncatula HOM05D006272 ORTHO05D007989 5.1e-69 265.0 202 65.8
SGA_v2.0_scaffold114G31850 Striga asiatica HOM05D006272 ORTHO05D007989 6.7e-69 264.6 225 65.8
CSS0019620 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 1.1e-68 263.8 214 67.8
MD06G1180300 Malus domestica HOM05D006272 ORTHO05D007989 1.5e-68 263.5 234 61.5
Psat5g113800 Pisum sativum HOM05D006272 ORTHO05D007989 1.5e-68 263.5 227 63.0
Sabra15G0096800 Salix brachista HOM05D006272 ORTHO05D007989 1.5e-68 263.5 202 65.8
Atru.chr9.2416 Acer truncatum HOM05D006272 ORTHO05D007989 4.3e-68 261.9 202 68.3
Ciclev10022132m.g Citrus clementina HOM05D006272 ORTHO05D007989 4.3e-68 261.9 191 69.1
RcHm_v2.0_Chr7g0179601 Rosa chinensis HOM05D006272 ORTHO05D007989 4.3e-68 261.9 226 62.4
Ah.11g046120 Amaranthus hybridus HOM05D006272 ORTHO05D007989 7.4e-68 261.2 228 61.4
Gorai.003G157900 Gossypium raimondii HOM05D006272 ORTHO05D007989 7.4e-68 261.2 208 65.9
CANSAT80G1784 Cannabis sativa HOM05D006272 ORTHO05D007989 9.6e-68 260.8 209 64.6
ClCG06G016760 Citrullus lanatus HOM05D006272 ORTHO05D007989 2.1e-67 259.6 184 68.5
FvH4_5g16490 Fragaria vesca HOM05D006272 ORTHO05D007989 8.1e-67 257.7 223 60.5
HanXRQChr16g0503601 Helianthus annuus HOM05D006272 ORTHO05D007989 8.1e-67 257.7 176 68.2
COL.COLO4_04328 Corchorus olitorius HOM05D006272 ORTHO05D007989 1.1e-66 257.3 190 66.8
Thecc.03G005700 Theobroma cacao HOM05D006272 ORTHO05D007989 1.8e-66 256.5 228 60.1
ECA232G4277 Erigeron canadensis HOM05D006272 ORTHO05D007989 4.0e-66 255.4 176 68.8
EL10Ac5g10820 Beta vulgaris HOM05D006272 ORTHO05D007989 5.3e-66 255.0 224 61.2
Sc12g0005560 Simmondsia chinensis HOM05D006272 ORTHO05D007989 9.0e-66 254.2 224 62.1
PGR083G1342 Punica granatum HOM05D006272 ORTHO05D007989 3.4e-65 252.3 187 65.8
arahy.Tifrunner.gnm1.ann1.I0QXBL Arachis hypogaea HOM05D006272 ORTHO05D007989 1.0e-64 250.8 218 63.3
Cfa019077 Carpinus fangiana HOM05D006272 ORTHO05D007989 1.7e-64 250.0 199 64.3
CDE04G2481 Ceratophyllum demersum HOM05D006272 ORTHO05D006222 1.7e-64 250.0 201 64.2
AUR62031036 Chenopodium quinoa HOM05D006272 ORTHO05D007989 1.7e-64 250.0 212 63.2
AUR62008277 Chenopodium quinoa HOM05D006272 ORTHO05D007989 2.9e-64 249.2 231 59.3
CsaV3_1G001760 Cucumis sativus L. HOM05D006272 ORTHO05D007989 3.8e-64 248.8 175 68.6
FAN04G2131 Fragaria x ananassa HOM05D006272 ORTHO05D007989 1.1e-63 247.3 193 64.8
FAN13G1305 Fragaria x ananassa HOM05D006272 ORTHO05D007989 1.1e-63 247.3 193 64.8
Nn4g22890 Nelumbo nucifera HOM05D006272 ORTHO05D007524 1.4e-63 246.9 210 60.0
TAR622G0996 Trochodendron aralioides HOM05D006272 ORTHO05D007989 1.9e-63 246.5 211 60.2
FAN18G3972 Fragaria x ananassa HOM05D006272 ORTHO05D007989 2.5e-63 246.1 242 55.8
Thhalv10014644m.g Eutrema salsugineum HOM05D006272 ORTHO05D007989 3.2e-63 245.7 211 61.6
Carub.0008s1010 Capsella rubella HOM05D006272 ORTHO05D007989 9.3e-63 244.2 222 59.5
BraSC37t46149Z Brassica rapa HOM05D006272 ORTHO05D007989 1.2e-62 243.8 190 64.7
Zm00001eb433220 Zea mays HOM05D006272 ORTHO05D007989 1.6e-62 243.4 161 69.6
Sed0009129 Sechium edule HOM05D006272 ORTHO05D007989 3.5e-62 242.3 174 67.2
Aqoxy3G03085 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 6.0e-62 241.5 167 70.1
AL8G24090 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 6.0e-62 241.5 221 59.7
MELO3C017116.2 Cucumis melo HOM05D006272 ORTHO05D007989 1.3e-61 240.4 165 69.7
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 1.8e-61 240.0 179 66.5
Aa31LG3G6090 Aethionema arabicum HOM05D006272 ORTHO05D007989 3.0e-61 239.2 184 65.2
BcaC04g20846 Brassica carinata HOM05D006272 ORTHO05D007989 3.0e-61 239.2 190 63.7
BolC9t56708H Brassica oleracea HOM05D006272 ORTHO05D007989 3.0e-61 239.2 190 63.7
AT5G50100 Arabidopsis thaliana HOM05D006272 ORTHO05D007989 3.9e-61 238.8 191 63.4
Lsat_1_v5_gn_4_72700 Lactuca sativa HOM05D006272 ORTHO05D007989 3.9e-61 238.8 209 58.4
THA.LOC104809256 Tarenaya hassleriana HOM05D006272 ORTHO05D007989 6.7e-61 238.0 214 57.9
Sp6g11960 Schrenkiella parvula HOM05D006272 ORTHO05D007989 1.9e-60 236.5 185 64.3
Os04g0668800 Oryza sativa ssp. japonica HOM05D006272 ORTHO05D007989 2.5e-60 236.1 193 59.1
PSO832G1007 Papaver somniferum HOM05D006272 ORTHO05D007989 2.5e-60 236.1 168 67.3
arahy.Tifrunner.gnm1.ann1.LZB4LR Arachis hypogaea HOM05D006272 ORTHO05D007989 1.6e-59 233.4 182 67.0
A10p08550 Brassica napus HOM05D006272 ORTHO05D007989 3.7e-59 232.3 179 64.2
Aqoxy3G03086 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 4.8e-59 231.9 166 69.3
BcaB08g35362 Brassica carinata HOM05D006272 ORTHO05D007989 1.8e-58 229.9 212 59.0
Hund09410 Selenicereus undatus HOM05D006272 ORTHO05D007989 1.8e-58 229.9 199 62.8
C09p38510 Brassica napus HOM05D006272 ORTHO05D007989 5.3e-58 228.4 213 57.7
Cpa.g.c38966 Carica papaya HOM05D006272 ORTHO05D007989 5.9e-57 224.9 125 82.4
PSO063G7353 Papaver somniferum HOM05D006272 ORTHO05D007989 2.9e-56 222.6 226 53.1
DCAR_021559 Daucus carota HOM05D006272 ORTHO05D007989 7.2e-55 218.0 149 67.8
HPP92_028587 Vanilla planifolia HOM05D006272 ORTHO05D007989 2.1e-54 216.5 168 61.3
Mapoly0071s0065 Marchantia polymorpha HOM05D006272 ORTHO05D007989 2.7e-54 216.1 161 61.5
FAN08G1485 Fragaria x ananassa HOM05D006272 ORTHO05D007989 3.6e-54 215.7 235 51.9
ATR1149G021 Amborella trichopoda HOM05D006272 ORTHO05D007989 6.1e-54 214.9 130 76.2
CSS0030983 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 6.3e-51 204.9 139 75.5
TWI15G0925 Tripterygium wilfordii HOM05D006272 ORTHO05D007989 4.5e-49 198.7 175 62.9
CBR_g17090 Chara braunii HOM05D006272 ORTHO05D007989 2.7e-46 189.5 143 57.3
Pp3c1_15150 Physcomitrium patens HOM05D006272 ORTHO05D007989 1.8e-45 186.8 222 47.3
MBI15_g12943_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 3.0e-45 186.0 130 67.7
Sed0028033 Sechium edule HOM05D006272 ORTHO05D007989 2.2e-43 179.9 127 68.5
SMO134G0173 Selaginella moellendorffii HOM05D006272 ORTHO05D007989 2.4e-42 176.4 118 66.1
CARHR258530 Cardamine hirsuta HOM05D006272 ORTHO05D007989 4.1e-42 175.6 190 53.2
Hma1.2p1_1643F.1_g295250 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 1.7e-40 170.2 157 59.2
Hma1.2p1_2351F.1_g320495 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 1.7e-40 170.2 157 59.2
SalBow3G0460 Salvia bowleyana HOM05D006272 ORTHO05D007989 2.3e-37 159.8 93 84.9
Cre03.g145587 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 2.6e-33 146.4 134 50.7
AL8G10070 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 3.8e-32 142.5 93 73.1
Dinv09172 Davidia involucrata HOM05D006272 ORTHO05D007989 8.5e-32 141.4 133 60.9
PRCOL_00006774 Prasinoderma coloniale HOM05D006272 ORTHO05D007989 1.9e-31 140.2 136 50.0
MCO16G260 Micromonas commoda HOM05D006272 ORTHO05D007989 2.5e-31 139.8 128 49.2
QL12p034838 Quercus lobata HOM05D006272 ORTHO05D007989 1.2e-30 137.5 81 80.2
SalBow3G4540 Salvia bowleyana HOM05D006272 ORTHO05D007989 7.5e-28 128.3 135 56.3
Gohir.A03G017120 Gossypium hirsutum HOM05D006272 ORTHO05D007989 3.1e-26 122.9 132 53.0
Cpa.g.c35589.1 Carica papaya HOM05D006272 ORTHO05D007989 1.6e-25 120.6 135 49.6
MBI15_g10564_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 3.0e-21 106.3 132 47.7
Cre02.g095077 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 1.0e-16 91.3 114 34.2
PRCOL_00004884 Prasinoderma coloniale HOM05D006272 ORTHO05D030206 6.6e-08 62.0 168 27.4
TPR.G22672 Trifolium pratense HOM05D006272 ORTHO05D007989 1.1e-07 61.2 38 71.1


User provided reference genes

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