Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400024564 Solanum tuberosum HOM05D007332 ORTHO05D009297 3.6e-103 378.3 188 100.0
Solyc03g113480.1 Solanum lycopersicum HOM05D007332 ORTHO05D009297 1.2e-95 353.2 192 92.2
Sopen03g032530 Solanum pennellii HOM05D007332 ORTHO05D009297 1.0e-94 350.1 195 92.8
CAN.G1486.2 Capsicum annuum HOM05D007332 ORTHO05D009297 9.4e-72 273.9 195 72.8
PGSC0003DMG400006046 Solanum tuberosum HOM05D007332 ORTHO05D009297 3.4e-69 265.4 189 76.2
Nitab4.5_0006720g0020 Nicotiana tabacum HOM05D007332 ORTHO05D009297 8.8e-62 240.7 197 68.0
Nitab4.5_0000111g0100 Nicotiana tabacum HOM05D007332 ORTHO05D009297 1.7e-60 236.5 195 67.2
Peaxi162Scf00310g00043 Petunia axillaris HOM05D007332 ORTHO05D009297 3.3e-56 222.2 197 64.0
Manes.02G166600 Manihot esculenta HOM05D007332 ORTHO05D009297 5.8e-37 158.3 194 51.5
COL.COLO4_03954 Corchorus olitorius HOM05D007332 ORTHO05D009297 2.2e-36 156.4 214 44.4
TWI34G0633 Tripterygium wilfordii HOM05D007332 ORTHO05D009297 2.9e-36 156.0 193 51.8
CiPaw.15G033700 Carya illinoinensis HOM05D007332 ORTHO05D009297 4.9e-36 155.2 197 50.3
Cfa018560 Carpinus fangiana HOM05D007332 ORTHO05D009297 1.1e-35 154.1 186 48.4
Ciclev10002610m.g Citrus clementina HOM05D007332 ORTHO05D009297 1.1e-35 154.1 191 50.3
Atru.chr13.1537 Acer truncatum HOM05D007332 ORTHO05D009297 1.4e-35 153.7 194 51.0
Hma1.2p1_0542F.1_g174970 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 7.1e-35 151.4 193 50.3
QL09p033201 Quercus lobata HOM05D007332 ORTHO05D009297 9.2e-35 151.0 196 48.5
FAN27G1631 Fragaria x ananassa HOM05D007332 ORTHO05D009297 6.0e-34 148.3 197 51.8
Cc10_g12430 Coffea canephora HOM05D007332 ORTHO05D009297 7.8e-34 147.9 213 47.9
FAN20G0761 Fragaria x ananassa HOM05D007332 ORTHO05D009297 1.0e-33 147.5 197 51.8
Dinv27272 Davidia involucrata HOM05D001470 ORTHO05D006430 1.7e-33 146.7 201 47.3
PGR044G1395 Punica granatum HOM05D007332 ORTHO05D009297 1.7e-33 146.7 206 45.6
CSS0048102 Camellia sinensis var. sinensis HOM05D007332 ORTHO05D009297 3.0e-33 146.0 201 47.3
Potri.002G080200 Populus trichocarpa HOM05D007332 ORTHO05D009297 5.1e-33 145.2 221 44.3
MSTRG.1422 Avicennia marina HOM05D007332 ORTHO05D009297 3.3e-32 142.5 197 48.2
FvH4_2g27560 Fragaria vesca HOM05D007332 ORTHO05D009297 7.3e-32 141.4 199 50.8
FAN24G1344 Fragaria x ananassa HOM05D007332 ORTHO05D009297 9.5e-32 141.0 199 50.8
Gohir.A05G237300 Gossypium hirsutum HOM05D007332 ORTHO05D009297 9.5e-32 141.0 204 44.1
Gorai.009G248200 Gossypium raimondii HOM05D007332 ORTHO05D009297 1.2e-31 140.6 204 44.1
Duzib116G0046 Durio zibethinus HOM05D007332 ORTHO05D009297 3.6e-31 139.0 203 44.8
Potri.005G181200 Populus trichocarpa HOM05D007332 ORTHO05D009297 3.6e-31 139.0 200 46.0
Duzib093G1986 Durio zibethinus HOM05D007332 ORTHO05D009297 8.1e-31 137.9 208 43.8
Gohir.D05G239400 Gossypium hirsutum HOM05D007332 ORTHO05D009297 8.1e-31 137.9 204 43.6
Lj1g0005314 Lotus japonicus HOM05D007332 ORTHO05D009297 1.1e-30 137.5 187 48.1
RcHm_v2.0_Chr6g0296401 Rosa chinensis HOM05D007332 ORTHO05D009297 2.4e-30 136.3 195 49.7
Sabra02G0062700 Salix brachista HOM05D007332 ORTHO05D009297 6.8e-30 134.8 186 46.2
arahy.Tifrunner.gnm1.ann1.ILK6IZ Arachis hypogaea HOM05D007332 ORTHO05D009297 7.6e-29 131.3 185 45.9
ClCG11G015900 Citrullus lanatus HOM05D007332 ORTHO05D009297 2.9e-28 129.4 187 45.5
MELO3C010504.2 Cucumis melo HOM05D007332 ORTHO05D009297 6.4e-28 128.3 190 45.8
Dinv14654 Davidia involucrata HOM05D007332 ORTHO05D009297 1.1e-27 127.5 179 42.5
PGSC0003DMG401029181 Solanum tuberosum HOM05D007332 ORTHO05D009297 2.4e-27 126.3 74 86.5
THA.LOC104813672 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 5.4e-27 125.2 226 38.5
Glyma.04G246900 Glycine max HOM05D007332 ORTHO05D009297 9.2e-27 124.4 185 44.3
Gohir.A06G046800 Gossypium hirsutum HOM05D007332 ORTHO05D009297 9.2e-27 124.4 181 45.9
SalBow7G3495 Salvia bowleyana HOM05D007332 ORTHO05D009297 9.2e-27 124.4 187 44.9
Psat5g085840 Pisum sativum HOM05D007332 ORTHO05D009297 2.1e-26 123.2 191 45.0
Gorai.010G052700 Gossypium raimondii HOM05D007332 ORTHO05D009297 7.8e-26 121.3 181 43.1
VMungo1309G0081 Vigna mungo HOM05D007332 ORTHO05D009297 2.3e-25 119.8 188 40.4
CsaV3_4G028070 Cucumis sativus L. HOM05D007332 ORTHO05D009297 3.9e-25 119.0 182 44.0
Eucgr.F04333 Eucalyptus grandis HOM05D007332 ORTHO05D009297 1.1e-24 117.5 215 42.8
BolC6t40174H Brassica oleracea HOM05D007332 ORTHO05D009297 1.5e-24 117.1 234 36.8
SGA_v2.0_scaffold52G18934 Striga asiatica HOM05D007332 ORTHO05D009297 1.5e-24 117.1 189 45.5
FAN15G1303 Fragaria x ananassa HOM05D007332 ORTHO05D009297 1.9e-24 116.7 172 49.4
BcaB03g15951 Brassica carinata HOM05D007332 ORTHO05D009297 3.3e-24 115.9 232 36.6
Phvul.009G128000 Phaseolus vulgaris HOM05D007332 ORTHO05D009297 3.3e-24 115.9 190 42.1
C06p51540 Brassica napus HOM05D007332 ORTHO05D009297 4.3e-24 115.5 234 36.8
BraA07t31813Z Brassica rapa HOM05D007332 ORTHO05D009297 4.3e-24 115.5 234 36.8
Glyma.06G115900 Glycine max HOM05D007332 ORTHO05D009297 5.6e-24 115.2 185 42.7
TAR381G0705 Trochodendron aralioides HOM05D007332 ORTHO05D009297 5.6e-24 115.2 183 40.4
AL2G37600 Arabidopsis lyrata HOM05D007332 ORTHO05D009297 7.3e-24 114.8 238 38.2
TPR.G13457 Trifolium pratense HOM05D007332 ORTHO05D009297 9.6e-24 114.4 191 44.0
Medtr3g088400 Medicago truncatula HOM05D007332 ORTHO05D009297 3.6e-23 112.5 193 42.0
CARHR070880 Cardamine hirsuta HOM05D007332 ORTHO05D009297 4.7e-23 112.1 236 36.9
AT1G77400 Arabidopsis thaliana HOM05D007332 ORTHO05D009297 6.2e-23 111.7 238 37.4
arahy.Tifrunner.gnm1.ann1.396V4Q Arachis hypogaea HOM05D007332 ORTHO05D009297 8.1e-23 111.3 157 45.9
A07p42920 Brassica napus HOM05D007332 ORTHO05D009297 1.4e-22 110.5 238 35.3
Carub.0002s2429 Capsella rubella HOM05D007332 ORTHO05D009297 1.4e-22 110.5 242 36.8
Thhalv10019445m.g Eutrema salsugineum HOM05D007332 ORTHO05D009297 1.8e-22 110.2 238 36.6
Aa31LG4G7420 Aethionema arabicum HOM05D007332 ORTHO05D009297 2.4e-22 109.8 243 38.3
BcaC08g47611 Brassica carinata HOM05D007332 ORTHO05D009297 2.4e-22 109.8 230 35.7
C02p17420 Brassica napus HOM05D007332 ORTHO05D009297 4.0e-22 109.0 211 37.9
BolC2t07856H Brassica oleracea HOM05D007332 ORTHO05D009297 4.0e-22 109.0 211 37.9
Sp5g32550 Schrenkiella parvula HOM05D007332 ORTHO05D009297 4.0e-22 109.0 225 37.3
Hma1.2p1_0542F.1_g175020 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 5.2e-22 108.6 158 44.3
Sabra05G0137200 Salix brachista HOM05D007332 ORTHO05D009297 5.2e-22 108.6 196 38.8
arahy.Tifrunner.gnm1.ann1.34D5TH Arachis hypogaea HOM05D007332 ORTHO05D009297 9.0e-22 107.8 157 43.9
Migut.C01053 Erythranthe guttata HOM05D007332 ORTHO05D009297 2.6e-21 106.3 190 44.2
Thecc.08G130400 Theobroma cacao HOM05D007332 ORTHO05D009297 7.6e-21 104.8 211 37.9
MD15G1344600 Malus domestica HOM05D007332 ORTHO05D009297 1.3e-20 104.0 193 39.4
BcaC08g47610 Brassica carinata HOM05D007332 ORTHO05D009297 2.9e-20 102.8 223 35.4
Nn5g28415 Nelumbo nucifera HOM05D007332 ORTHO05D009297 3.8e-20 102.4 169 45.0
BcaB05g25043 Brassica carinata HOM05D007332 ORTHO05D009297 8.4e-20 101.3 229 34.5
DCAR_003566 Daucus carota HOM05D007332 ORTHO05D009297 5.4e-19 98.6 194 38.1
Prupe.1G492300 Prunus persica HOM05D007332 ORTHO05D009297 5.4e-19 98.6 189 40.2
BcaC03g15733 Brassica carinata HOM05D007332 ORTHO05D009297 3.5e-18 95.9 230 37.4
ECA232G0093 Erigeron canadensis HOM05D007332 ORTHO05D009297 6.6e-17 91.7 188 37.2
BolC2t09481H Brassica oleracea HOM05D007332 ORTHO05D009297 5.6e-16 88.6 225 36.4
C02p34520 Brassica napus HOM05D007332 ORTHO05D009297 7.3e-16 88.2 207 37.7
Nn1g08887 Nelumbo nucifera HOM05D007332 ORTHO05D009297 2.1e-15 86.7 212 35.8
Actinidia15225 Actinidia chinensis HOM05D007332 ORTHO05D009297 2.4e-14 83.2 123 43.1
BraA02t07143Z Brassica rapa HOM05D007332 ORTHO05D009297 4.0e-14 82.4 207 36.2
Ca_16594_v3 Cicer arietinum L. HOM05D007332 ORTHO05D009297 6.9e-14 81.6 162 38.3
Lsat_1_v5_gn_4_74261 Lactuca sativa HOM05D007332 ORTHO05D009297 1.2e-13 80.9 194 33.0
A02p21250 Brassica napus HOM05D007332 ORTHO05D009297 1.5e-13 80.5 226 33.6
Lalb_Chr17g0343611 Lupinus albus HOM05D007332 ORTHO05D009297 5.8e-13 78.6 180 37.8
HanXRQChr09g0260291 Helianthus annuus HOM05D007332 ORTHO05D009297 2.2e-12 76.6 192 34.9
MBI06_g33108_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 2.2e-12 76.6 190 32.1
Sed0015452 Sechium edule HOM05D007332 ORTHO05D009297 1.2e-10 70.9 153 33.3
Migut.L00247 Erythranthe guttata HOM05D007332 ORTHO05D009297 6.0e-10 68.6 121 39.7
Migut.L00823 Erythranthe guttata HOM05D007332 ORTHO05D009297 6.0e-10 68.6 121 39.7
THA.LOC104800214 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 8.1e-07 58.2 166 33.1
Aqoxy5G02371 Aquilegia oxysepala HOM05D007332 ORTHO05D009297 6.9e-06 55.1 148 34.5


User provided reference genes

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