Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400024562 Solanum tuberosum HOM05D012087 ORTHO05D005932 4.5e-130 468.0 248 100.0
Solyc03g115730.3 Solanum lycopersicum HOM05D012087 ORTHO05D005932 4.5e-114 414.8 248 91.1
Sopen03g034710 Solanum pennellii HOM05D012087 ORTHO05D005932 2.2e-113 412.5 248 89.1
Nitab4.5_0001211g0150 Nicotiana tabacum HOM05D012087 ORTHO05D005932 4.4e-85 318.5 242 71.5
Nitab4.5_0005900g0030 Nicotiana tabacum HOM05D012087 ORTHO05D005932 9.5e-80 300.8 246 69.1
CAN.G479.59 Capsicum annuum HOM05D012087 ORTHO05D005932 2.1e-79 299.7 254 68.1
Peaxi162Scf00274g00335 Petunia axillaris HOM05D012087 ORTHO05D005932 8.1e-63 244.6 218 61.9
Cc00_g25850 Coffea canephora HOM05D012087 ORTHO05D005932 1.8e-14 84.0 210 36.2
Migut.D01759 Erythranthe guttata HOM05D012087 ORTHO05D005932 5.0e-12 75.9 218 32.1
Duzib084G1416 Durio zibethinus HOM05D008369 ORTHO05D005932 1.4e-11 74.3 213 31.5
SalBow5G3698 Salvia bowleyana HOM05D012087 ORTHO05D005932 2.5e-11 73.6 225 32.4
CSS0001536 Camellia sinensis var. sinensis HOM05D008369 ORTHO05D005932 5.5e-11 72.4 232 29.3
Thecc.03G094300 Theobroma cacao HOM05D008369 ORTHO05D005932 5.5e-11 72.4 208 30.3
Manes.06G089401 Manihot esculenta HOM05D000041 ORTHO05D006140 9.4e-11 71.6 204 30.9
Sed0006867 Sechium edule HOM05D008369 ORTHO05D005932 4.7e-10 69.3 218 33.0
Dinv10658 Davidia involucrata HOM05D008369 ORTHO05D005932 1.0e-09 68.2 210 31.9
MSTRG.11371 Avicennia marina HOM05D012087 ORTHO05D005932 2.3e-09 67.0 212 29.7
Dinv38746 Davidia involucrata HOM05D008369 ORTHO05D005932 3.9e-09 66.2 247 31.6
COL.COLO4_36949 Corchorus olitorius HOM05D008369 ORTHO05D005932 5.1e-09 65.9 213 29.6
Cfa019277 Carpinus fangiana HOM05D008369 ORTHO05D005932 6.7e-09 65.5 204 30.9
SGA_v2.0_scaffold313G48329 Striga asiatica HOM05D012087 ORTHO05D005932 8.8e-09 65.1 224 29.9
CSS0024821 Camellia sinensis var. sinensis HOM05D008369 ORTHO05D005932 3.3e-08 63.2 232 27.6
MD14G1205100 Malus domestica HOM05D008369 ORTHO05D005932 9.7e-08 61.6 221 33.9
Oeu052457.1 Olea europaea HOM05D012087 ORTHO05D005932 9.7e-08 61.6 184 30.4
THA.LOC104818323 Tarenaya hassleriana HOM05D010063 ORTHO05D011941 9.7e-08 61.6 220 28.6
FAN18G3211 Fragaria x ananassa HOM05D008369 ORTHO05D005932 1.7e-07 60.8 227 29.5
Medtr4g108990 Medicago truncatula HOM05D008369 ORTHO05D005932 2.2e-07 60.5 198 30.3
BcaB01g06057 Brassica carinata HOM05D010063 ORTHO05D011941 4.8e-07 59.3 249 27.7
BolC3t12923H Brassica oleracea HOM05D010063 ORTHO05D011941 4.8e-07 59.3 249 27.7
Ciclev10022335m.g Citrus clementina HOM05D008369 ORTHO05D005932 4.8e-07 59.3 211 30.3
MD06G1197700 Malus domestica HOM05D008369 ORTHO05D005932 6.3e-07 58.9 214 30.8
Rhsim08G0152100 Rhododendron simsii HOM05D008369 ORTHO05D005932 6.3e-07 58.9 223 29.1
Oeu047275.1 Olea europaea HOM05D012087 ORTHO05D005932 1.8e-06 57.4 230 27.0
FAN13G2099 Fragaria x ananassa HOM05D008369 ORTHO05D005932 3.1e-06 56.6 226 30.1
Gohir.D11G035400 Gossypium hirsutum HOM05D008369 ORTHO05D005932 7.0e-06 55.5 201 28.4
FAN08G2699 Fragaria x ananassa HOM05D008369 ORTHO05D005932 9.1e-06 55.1 204 32.4


User provided reference genes

Program Settings