Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400024520 Solanum tuberosum HOM05D007643 ORTHO05D007801 3.0e-73 278.5 147 100.0
Sopen03g033740 Solanum pennellii HOM05D007643 ORTHO05D007801 1.9e-64 249.2 147 91.8
Nitab4.5_0000646g0290 Nicotiana tabacum HOM05D007643 ORTHO05D007801 1.4e-46 189.9 144 75.0
CAN.G982.32 Capsicum annuum HOM05D007643 ORTHO05D007801 2.6e-45 185.7 145 73.1
Nitab4.5_0002805g0050 Nicotiana tabacum HOM05D007643 ORTHO05D007801 3.4e-45 185.3 143 71.3
Peaxi162Scf00017g03267 Petunia axillaris HOM05D007643 ORTHO05D007801 3.6e-34 148.7 90 83.3
Nitab4.5_0002449g0120 Nicotiana tabacum HOM05D007643 ORTHO05D007801 6.1e-26 121.3 91 73.6
Nitab4.5_0004190g0030 Nicotiana tabacum HOM05D007643 ORTHO05D007801 1.0e-25 120.6 91 72.5
MSTRG.9860 Avicennia marina HOM05D007643 ORTHO05D007801 3.4e-24 115.5 152 49.3
Migut.G00548 Erythranthe guttata HOM05D007643 ORTHO05D007801 3.7e-23 112.1 158 46.2
Oeu059396.1 Olea europaea HOM05D007643 ORTHO05D007801 5.9e-21 104.8 86 59.3
SGA_v2.0_scaffold67G22694 Striga asiatica HOM05D007643 ORTHO05D007801 3.3e-19 99.0 87 58.6
MSTRG.4170 Avicennia marina HOM05D007643 ORTHO05D007801 9.5e-19 97.4 131 45.8
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 1.2e-16 90.5 96 53.1
Solyc06g069350.3 Solanum lycopersicum HOM05D007643 ORTHO05D007801 2.6e-16 89.4 83 61.4
Cc04_g08010 Coffea canephora HOM05D007643 ORTHO05D007801 3.4e-16 89.0 145 40.0
unitig_746.g26846 Utricularia gibba HOM05D007643 ORTHO05D007801 3.7e-15 85.5 84 47.6
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 9.2e-14 80.9 92 52.2
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.7e-12 76.6 151 39.7
CANSAT11G0293 Cannabis sativa HOM05D007643 ORTHO05D007801 3.8e-12 75.5 85 50.6
Rhsim12G0146900 Rhododendron simsii HOM05D000001 ORTHO05D000003 3.8e-12 75.5 105 44.8
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 5.0e-12 75.1 143 39.2
Actinidia18967 Actinidia chinensis HOM05D007643 ORTHO05D007801 1.5e-11 73.6 146 37.0
PGR044G0452 Punica granatum HOM05D007643 ORTHO05D007801 2.5e-11 72.8 132 37.9
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 3.3e-11 72.4 143 38.5
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 5.6e-11 71.6 87 47.1
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 5.6e-11 71.6 143 39.9
arahy.Tifrunner.gnm1.ann1.Z569TI Arachis hypogaea HOM05D007643 ORTHO05D007801 1.6e-10 70.1 129 38.8
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 1.6e-10 70.1 87 42.5
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.6e-10 70.1 145 38.6
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 2.1e-10 69.7 120 40.0
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 2.8e-10 69.3 88 46.6
Actinidia35057 Actinidia chinensis HOM05D007643 ORTHO05D007801 4.7e-10 68.6 143 35.0
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.0e-09 67.4 87 44.8
RcHm_v2.0_Chr7g0183911 Rosa chinensis HOM05D007643 ORTHO05D007801 1.0e-09 67.4 144 40.3
Aa31LG11G2440 Aethionema arabicum HOM05D007643 ORTHO05D007801 1.4e-09 67.0 134 35.1
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 1.8e-09 66.6 143 36.4
CSS0044770 Camellia sinensis var. sinensis HOM05D007643 ORTHO05D007801 2.3e-09 66.2 108 40.7
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 2.3e-09 66.2 138 35.5
CDE02G0802 Ceratophyllum demersum HOM05D007643 ORTHO05D007801 4.0e-09 65.5 85 40.0
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 4.0e-09 65.5 143 33.6
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 5.2e-09 65.1 87 42.5
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 5.2e-09 65.1 87 43.7
ECA232G2778 Erigeron canadensis HOM05D007643 ORTHO05D007801 6.8e-09 64.7 69 46.4
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 1.2e-08 63.9 136 36.0
Glyma.04G185600 Glycine max HOM05D007643 ORTHO05D007801 1.2e-08 63.9 131 36.6
Lalb_Chr23g0273871 Lupinus albus HOM05D007643 ORTHO05D007801 1.5e-08 63.5 124 33.9
MD14G1217500 Malus domestica HOM05D007643 ORTHO05D007801 1.5e-08 63.5 146 33.6
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 1.5e-08 63.5 129 34.9
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 2.0e-08 63.2 82 41.5
MD06G1206900 Malus domestica HOM05D007643 ORTHO05D007801 2.0e-08 63.2 139 34.5
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 2.6e-08 62.8 75 44.0
CsaV3_1G003240 Cucumis sativus L. HOM05D007643 ORTHO05D007801 3.4e-08 62.4 145 34.5
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 3.4e-08 62.4 135 35.6
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 4.4e-08 62.0 141 35.5
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 4.4e-08 62.0 83 39.8
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 5.8e-08 61.6 75 44.0
Lsat_1_v5_gn_4_112541 Lactuca sativa HOM05D007643 ORTHO05D007801 7.5e-08 61.2 141 36.2
Glyma.06G180500 Glycine max HOM05D007643 ORTHO05D007801 9.8e-08 60.8 111 36.9
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.3e-07 60.5 131 33.6
FvH4_5g13250 Fragaria vesca HOM05D007643 ORTHO05D007801 2.9e-07 59.3 108 41.7
GSVIVG01008172001 Vitis vinifera HOM05D007643 ORTHO05D007801 2.9e-07 59.3 155 33.5
FAN13G0443 Fragaria x ananassa HOM05D007643 ORTHO05D007801 3.7e-07 58.9 48 56.2
Phvul.009G176200 Phaseolus vulgaris HOM05D007643 ORTHO05D007801 3.7e-07 58.9 137 32.1
AUR62032152 Chenopodium quinoa HOM05D007643 ORTHO05D007801 6.4e-07 58.2 83 37.3
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 8.3e-07 57.8 131 32.8
AUR62039686 Chenopodium quinoa HOM05D007643 ORTHO05D007801 1.1e-06 57.4 83 37.3
PSO782G0046 Papaver somniferum HOM05D007643 ORTHO05D007801 1.9e-06 56.6 141 30.5
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 2.4e-06 56.2 127 33.9
Manes.14G090200 Manihot esculenta HOM05D007643 ORTHO05D007801 4.1e-06 55.5 74 40.5
Solyc03g114670.4 Solanum lycopersicum HOM05D007643 ORTHO05D007801 4.1e-06 55.5 41 73.2
Medtr2g059060 Medicago truncatula HOM05D007643 ORTHO05D007801 5.4e-06 55.1 146 33.6
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 7.0e-06 54.7 134 32.1
Lj1g0019261 Lotus japonicus HOM05D007643 ORTHO05D007801 7.0e-06 54.7 131 34.4
PSO063G2669 Papaver somniferum HOM05D007643 ORTHO05D007801 9.2e-06 54.3 141 30.5


User provided reference genes

Program Settings