Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400024310 Solanum tuberosum HOM05D007229 ORTHO05D009131 9.0e-96 353.6 180 100.0
Sopen06g015630 Solanum pennellii HOM05D007229 ORTHO05D009131 8.4e-86 320.5 182 92.3
Solyc06g050170.4 Solanum lycopersicum HOM05D000154 ORTHO05D000092 1.4e-80 303.1 183 87.4
Peaxi162Scf00739g00125 Petunia axillaris HOM05D000154 ORTHO05D000092 5.5e-69 264.6 183 78.1
Cc02_g05510 Coffea canephora HOM05D007229 ORTHO05D009131 2.8e-65 252.3 178 71.9
CAN.G55.3 Capsicum annuum HOM05D007229 ORTHO05D009131 1.1e-64 250.4 186 73.1
Gohir.A05G403900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 1.9e-61 239.6 180 71.7
Gohir.D04G011900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 1.9e-61 239.6 180 71.7
Gorai.012G014100 Gossypium raimondii HOM05D007229 ORTHO05D009131 2.5e-61 239.2 180 71.7
COL.COLO4_19452 Corchorus olitorius HOM05D007229 ORTHO05D009131 3.2e-61 238.8 181 72.9
Thecc.10G183800 Theobroma cacao HOM05D007229 ORTHO05D009131 9.4e-61 237.3 183 71.0
GSVIVG01032702001 Vitis vinifera HOM05D007229 ORTHO05D009131 9.4e-61 237.3 183 72.1
Dinv26059 Davidia involucrata HOM05D007229 ORTHO05D009131 1.2e-60 236.9 180 71.7
Hma1.2p1_2086F.1_g313730 Hydrangea macrophylla HOM05D007229 ORTHO05D009131 1.6e-60 236.5 178 69.1
Manes.10G004800 Manihot esculenta HOM05D007229 ORTHO05D009131 2.7e-60 235.7 180 70.0
Oeu020108.1 Olea europaea HOM05D007229 ORTHO05D009131 3.6e-60 235.3 184 73.4
Lj1g0022940 Lotus japonicus HOM05D007229 ORTHO05D009131 4.6e-60 235.0 180 70.0
TAR369G0442 Trochodendron aralioides HOM05D007229 ORTHO05D009131 7.9e-60 234.2 180 69.4
PGR044G2361 Punica granatum HOM05D007229 ORTHO05D009131 1.0e-59 233.8 181 71.3
Glyma.06G143700 Glycine max HOM05D007229 ORTHO05D009131 1.4e-59 233.4 180 68.9
Potri.019G056400 Populus trichocarpa HOM05D007229 ORTHO05D009131 2.3e-59 232.6 178 69.7
Glyma.04G221700 Glycine max HOM05D007229 ORTHO05D009131 8.8e-59 230.7 180 67.8
arahy.Tifrunner.gnm1.ann1.I1HNZH Arachis hypogaea HOM05D007229 ORTHO05D009131 1.1e-58 230.3 181 67.4
Manes.07G139500 Manihot esculenta HOM05D007229 ORTHO05D009131 1.1e-58 230.3 182 68.7
Sabra19G0072100 Salix brachista HOM05D007229 ORTHO05D009131 1.5e-58 229.9 179 70.4
MSTRG.27273 Avicennia marina HOM05D007229 ORTHO05D009131 2.0e-58 229.6 184 71.2
Haze_17350 Corylus avellana HOM05D000154 ORTHO05D000092 2.0e-58 229.6 178 69.7
arahy.Tifrunner.gnm1.ann1.B9ILCP Arachis hypogaea HOM05D007229 ORTHO05D009131 2.6e-58 229.2 178 67.4
QL08p064765 Quercus lobata HOM05D007229 ORTHO05D009131 4.4e-58 228.4 179 65.4
SalBow3G2298 Salvia bowleyana HOM05D007229 ORTHO05D009131 4.4e-58 228.4 185 68.6
Rhsim09G0184500 Rhododendron simsii HOM05D007229 ORTHO05D009131 5.7e-58 228.0 184 67.4
VMungo1309G1820 Vigna mungo HOM05D007229 ORTHO05D009131 7.4e-58 227.6 178 66.9
FvH4_7g25840 Fragaria vesca HOM05D007229 ORTHO05D009131 1.3e-57 226.9 178 69.1
FAN06G3440 Fragaria x ananassa HOM05D007229 ORTHO05D009131 1.3e-57 226.9 178 69.1
Lj1A965T45 Lonicera japonica HOM05D007229 ORTHO05D009131 1.3e-57 226.9 183 66.1
Phvul.009G142501 Phaseolus vulgaris HOM05D007229 ORTHO05D009131 1.7e-57 226.5 178 66.3
TWI53G0143 Tripterygium wilfordii HOM05D007229 ORTHO05D009131 2.2e-57 226.1 181 67.4
MD07G1232800 Malus domestica HOM05D007229 ORTHO05D009131 3.7e-57 225.3 179 65.9
Hund13463 Selenicereus undatus HOM05D007229 ORTHO05D009131 3.7e-57 225.3 180 67.2
Actinidia00993 Actinidia chinensis HOM05D007229 ORTHO05D009131 8.2e-57 224.2 183 64.5
Duzib114G0482 Durio zibethinus HOM05D007229 ORTHO05D009131 1.8e-56 223.0 180 68.9
Lalb_Chr11g0067841 Lupinus albus HOM05D007229 ORTHO05D009131 4.1e-56 221.9 178 65.7
Prupe.2G263300 Prunus persica HOM05D007229 ORTHO05D009131 5.3e-56 221.5 176 65.3
SGA_v2.0_scaffold60G20901 Striga asiatica HOM05D007229 ORTHO05D009131 5.3e-56 221.5 179 69.3
AT3G56290 Arabidopsis thaliana HOM05D007229 ORTHO05D009131 9.1e-56 220.7 182 67.0
Ciclev10033477m.g Citrus clementina HOM05D007229 ORTHO05D009131 2.0e-55 219.5 180 65.0
Medtr3g094080 Medicago truncatula HOM05D007229 ORTHO05D009131 3.4e-55 218.8 178 65.2
Lsat_1_v5_gn_8_13541 Lactuca sativa HOM05D007229 ORTHO05D009131 1.0e-54 217.2 185 63.2
MBI15_g35108_MAGBIO Magnolia biondii HOM05D007229 ORTHO05D009131 1.0e-54 217.2 179 65.9
Nitab4.5_0000109g0540 Nicotiana tabacum HOM05D000154 ORTHO05D009131 1.0e-54 217.2 184 68.5
ECA233G6234 Erigeron canadensis HOM05D007229 ORTHO05D009131 1.3e-54 216.9 178 60.7
Cpa.g.sc19.82 Carica papaya HOM05D007229 ORTHO05D009131 2.9e-54 215.7 155 74.8
HanXRQChr08g0222581 Helianthus annuus HOM05D007229 ORTHO05D009131 3.8e-54 215.3 182 63.2
CDE12G0285 Ceratophyllum demersum HOM05D007229 ORTHO05D009131 5.0e-54 214.9 184 63.0
RcHm_v2.0_Chr1g0372111 Rosa chinensis HOM05D007229 ORTHO05D009131 5.0e-54 214.9 176 64.2
Sc14g0005610 Simmondsia chinensis HOM05D007229 ORTHO05D009131 1.1e-53 213.8 182 65.4
Carub.0005s2307 Capsella rubella HOM05D007229 ORTHO05D009131 1.9e-53 213.0 187 64.2
Migut.F00594 Erythranthe guttata HOM05D007229 ORTHO05D009131 2.5e-53 212.6 199 59.3
Nitab4.5_0003695g0030 Nicotiana tabacum HOM05D007229 ORTHO05D009131 2.5e-53 212.6 186 67.7
PSO339G1638 Papaver somniferum HOM05D007229 ORTHO05D009131 4.2e-53 211.8 136 76.5
ClCG07G004950 Citrullus lanatus HOM05D007229 ORTHO05D009131 5.5e-53 211.5 155 71.6
EL10Ac2g04250 Beta vulgaris HOM05D007229 ORTHO05D009131 9.4e-53 210.7 204 60.8
BcaC08g44777 Brassica carinata HOM05D007229 ORTHO05D009131 9.4e-53 210.7 184 64.1
A07p22880 Brassica napus HOM05D007229 ORTHO05D009131 9.4e-53 210.7 184 64.1
C06p23470 Brassica napus HOM05D007229 ORTHO05D009131 9.4e-53 210.7 184 64.1
BraA07t29954Z Brassica rapa HOM05D007229 ORTHO05D009131 9.4e-53 210.7 184 64.1
PSO384G2154 Papaver somniferum HOM05D007229 ORTHO05D009131 1.2e-52 210.3 136 76.5
Sed0026302 Sechium edule HOM05D007229 ORTHO05D009131 1.2e-52 210.3 121 86.0
BcaB01g00004 Brassica carinata HOM05D007229 ORTHO05D009131 1.6e-52 209.9 181 64.1
BcaB01g00005 Brassica carinata HOM05D007229 ORTHO05D009131 1.6e-52 209.9 181 64.1
AUR62012362 Chenopodium quinoa HOM05D007229 ORTHO05D009131 1.6e-52 209.9 180 65.0
MELO3C020131.2 Cucumis melo HOM05D007229 ORTHO05D009131 1.6e-52 209.9 148 74.3
CiPaw.01G306000 Carya illinoinensis HOM05D007229 ORTHO05D009131 2.1e-52 209.5 182 62.6
BolC6t37520H Brassica oleracea HOM05D007229 ORTHO05D009131 2.7e-52 209.1 184 63.6
Duzib106G0259 Durio zibethinus HOM05D007229 ORTHO05D009131 3.6e-52 208.8 136 78.7
Aa31LG10G11190 Aethionema arabicum HOM05D007229 ORTHO05D009131 4.7e-52 208.4 187 62.6
CsaV3_5G010830 Cucumis sativus L. HOM05D007229 ORTHO05D009131 6.1e-52 208.0 142 75.4
Sp5g06210 Schrenkiella parvula HOM05D007229 ORTHO05D009131 6.1e-52 208.0 185 62.7
CARHR166450 Cardamine hirsuta HOM05D007229 ORTHO05D009131 7.9e-52 207.6 185 63.2
Psat5g069080 Pisum sativum HOM05D007229 ORTHO05D009131 7.9e-52 207.6 180 61.7
TPR.G16113 Trifolium pratense HOM05D007229 ORTHO05D009131 7.9e-52 207.6 179 63.7
BcaC07g39946 Brassica carinata HOM05D007229 ORTHO05D009131 3.9e-51 205.3 182 62.6
C08p31620 Brassica napus HOM05D007229 ORTHO05D009131 3.9e-51 205.3 182 62.6
BolC8t50783H Brassica oleracea HOM05D007229 ORTHO05D009131 3.9e-51 205.3 182 62.6
Os01g0823600 Oryza sativa ssp. japonica HOM05D007229 ORTHO05D009131 3.9e-51 205.3 180 64.4
CSS0032880 Camellia sinensis var. sinensis HOM05D007229 ORTHO05D009131 5.2e-51 204.9 185 61.6
A09p49260 Brassica napus HOM05D007229 ORTHO05D009131 6.7e-51 204.5 181 62.4
BraA09t40379Z Brassica rapa HOM05D007229 ORTHO05D009131 6.7e-51 204.5 181 62.4
Thhalv10006268m.g Eutrema salsugineum HOM05D007229 ORTHO05D009131 2.6e-50 202.6 182 62.6
THA.LOC104824356 Tarenaya hassleriana HOM05D007229 ORTHO05D009131 2.6e-50 202.6 152 71.7
HPP92_017919 Vanilla planifolia HOM05D007229 ORTHO05D009131 3.3e-50 202.2 177 59.3
AL5G37620 Arabidopsis lyrata HOM05D007229 ORTHO05D009131 1.7e-49 199.9 180 62.8
DCAR_019811 Daucus carota HOM05D007229 ORTHO05D009131 6.3e-49 198.0 128 76.6
AUR62031491 Chenopodium quinoa HOM05D000154 ORTHO05D000092 8.2e-49 197.6 113 82.3
Aqoxy2G00722 Aquilegia oxysepala HOM05D007229 ORTHO05D009131 1.4e-48 196.8 151 70.2
SEGI_31216 Sequoiadendron giganteum HOM05D007229 ORTHO05D009131 1.3e-46 190.3 137 66.4
BcaB02g07659 Brassica carinata HOM05D007229 ORTHO05D009131 1.9e-45 186.4 189 57.7
Mapoly0032s0114 Marchantia polymorpha HOM05D007229 ORTHO05D009131 2.1e-44 183.0 119 70.6
ATR0681G125 Amborella trichopoda HOM05D007229 ORTHO05D009131 2.7e-44 182.6 178 60.1
vmacro09972 Vaccinium macrocarpon HOM05D007229 ORTHO05D009131 3.6e-44 182.2 184 58.7
Pp3c19_14460 Physcomitrium patens HOM05D007229 ORTHO05D009131 3.0e-43 179.1 151 62.9
SMO230G0076 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.1e-40 170.6 128 64.8
SMO230G0102 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.4e-32 143.7 117 63.2
SMO230G0113 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.4e-32 143.7 106 67.0
SabraUnG0004000 Salix brachista HOM05D007229 ORTHO05D009131 6.5e-30 134.8 125 64.8
Ah.10g035980 Amaranthus hybridus HOM05D007229 ORTHO05D009131 1.0e-27 127.5 180 49.4
Sed0009884 Sechium edule HOM05D007229 ORTHO05D009131 3.0e-27 125.9 122 58.2
Nn2g10342 Nelumbo nucifera HOM05D000154 ORTHO05D000092 5.9e-23 111.7 67 79.1
MD01G1165900 Malus domestica HOM05D000154 ORTHO05D000092 2.3e-22 109.8 58 84.5
Zm00001eb149430 Zea mays HOM05D007229 ORTHO05D009131 1.1e-21 107.5 123 54.5
AagrBONN_evm.TU.Sc2ySwM_344.3614 Anthoceros agrestis HOM05D007229 ORTHO05D009131 1.2e-20 104.0 89 67.4
FAN01G1364 Fragaria x ananassa HOM05D007229 ORTHO05D009131 1.0e-19 100.9 114 57.0
Eucgr.J00129 Eucalyptus grandis HOM05D007229 ORTHO05D009131 1.4e-08 63.9 95 46.3


User provided reference genes

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