Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 1.9e-133 479.2 236 100.0
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 4.9e-126 454.5 236 95.3
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 1.1e-125 453.4 236 94.9
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 2.8e-121 438.7 236 90.7
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 3.5e-116 421.8 236 86.4
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 1.2e-111 406.8 237 84.8
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 3.2e-101 372.1 196 90.3
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 1.8e-99 366.3 239 74.9
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 4.0e-96 355.1 236 72.5
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 6.9e-96 354.4 237 73.0
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 9.0e-96 354.0 239 73.6
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 4.5e-95 351.7 236 73.7
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 5.8e-95 351.3 237 73.4
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 2.9e-94 349.0 238 73.5
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 4.9e-94 348.2 240 71.7
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 6.5e-94 347.8 241 72.6
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 8.4e-94 347.4 232 72.8
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 3.2e-93 345.5 236 70.8
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 9.3e-93 344.0 236 70.3
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 9.3e-93 344.0 237 71.7
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 9.3e-93 344.0 236 72.5
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 2.1e-92 342.8 237 70.9
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 2.1e-92 342.8 242 71.1
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 3.5e-92 342.0 237 70.9
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 3.5e-92 342.0 235 71.5
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 4.6e-92 341.7 238 71.4
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 4.6e-92 341.7 237 71.7
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 7.9e-92 340.9 237 70.9
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 1.0e-91 340.5 239 69.9
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 1.3e-91 340.1 238 71.8
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 1.3e-91 340.1 237 70.5
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.3e-91 339.3 237 71.3
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 3.0e-91 339.0 236 70.8
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 3.9e-91 338.6 237 71.7
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 6.7e-91 337.8 237 70.9
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 1.1e-90 337.0 237 70.5
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 1.1e-90 337.0 217 74.7
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 1.1e-90 337.0 237 70.5
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 1.5e-90 336.7 237 69.6
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 1.5e-90 336.7 238 69.3
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 1.9e-90 336.3 216 75.9
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 1.9e-90 336.3 226 71.7
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 3.3e-90 335.5 226 71.7
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 5.7e-90 334.7 237 70.5
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 5.7e-90 334.7 241 70.1
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 5.7e-90 334.7 240 69.6
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 7.4e-90 334.3 240 69.2
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 7.4e-90 334.3 238 71.0
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 1.3e-89 333.6 216 73.6
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.3e-89 333.6 237 70.0
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 1.3e-89 333.6 222 71.6
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 1.6e-89 333.2 239 71.1
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.8e-89 332.4 241 69.7
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 2.8e-89 332.4 239 69.0
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 3.7e-89 332.0 239 69.0
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 4.8e-89 331.6 240 69.2
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 4.8e-89 331.6 237 69.2
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 1.1e-88 330.5 240 67.5
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 2.4e-88 329.3 216 74.5
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 3.1e-88 328.9 237 67.9
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 3.1e-88 328.9 226 70.4
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 5.3e-88 328.2 210 75.7
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 5.3e-88 328.2 221 69.2
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 6.9e-88 327.8 225 71.1
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 1.5e-87 326.6 240 68.3
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 2.6e-87 325.9 237 69.2
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 4.5e-87 325.1 236 67.8
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 7.6e-87 324.3 245 67.3
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 7.6e-87 324.3 196 80.6
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 1.0e-86 323.9 306 57.8
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 8.4e-86 320.9 228 66.7
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 1.4e-85 320.1 238 67.2
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 1.9e-85 319.7 219 70.3
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 2.5e-85 319.3 206 75.7
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 3.2e-85 318.9 220 70.9
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 1.6e-84 316.6 238 66.4
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 6.1e-84 314.7 220 70.0
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 1.0e-83 313.9 219 69.4
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 1.0e-83 313.9 238 66.0
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 3.9e-83 312.0 247 64.8
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 3.9e-83 312.0 221 68.3
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 3.9e-83 312.0 221 68.3
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 3.9e-83 312.0 221 68.3
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 5.1e-83 311.6 235 68.1
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 1.1e-82 310.5 219 69.4
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 3.3e-82 308.9 221 67.4
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 4.3e-82 308.5 233 64.8
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 5.7e-82 308.1 223 67.3
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 5.7e-82 308.1 223 67.3
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 5.7e-82 308.1 219 69.4
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 5.7e-82 308.1 235 66.8
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 9.7e-82 307.4 194 76.3
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 1.3e-81 307.0 224 63.4
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 4.8e-81 305.1 236 64.0
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 8.2e-81 304.3 196 75.5
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 9.0e-80 300.8 223 66.4
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 1.2e-76 290.4 225 65.8
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 2.1e-76 289.7 238 61.3
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 6.7e-75 284.6 205 68.3
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 1.5e-74 283.5 216 63.9
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 4.3e-74 282.0 200 69.0
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 4.1e-72 275.4 240 58.3
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 5.3e-72 275.0 213 60.6
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 8.5e-70 267.7 187 69.5
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 1.8e-67 260.0 217 59.4
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 9.7e-66 254.2 198 64.1
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 2.6e-63 246.1 219 54.3
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 3.5e-63 245.7 201 61.7
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 3.5e-63 245.7 276 52.9
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 5.5e-61 238.4 196 64.3
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 7.5e-58 228.0 176 61.9
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.3e-57 227.3 142 75.4
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 6.3e-57 224.9 202 56.9
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 3.5e-55 219.2 233 49.4
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 2.5e-53 213.0 141 73.0
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 1.7e-49 200.3 191 51.8
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.0e-46 191.0 125 73.6
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 7.8e-31 138.3 185 40.5
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 1.3e-30 137.5 207 41.1
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.3e-22 110.2 92 62.0
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 1.9e-21 107.1 217 35.0
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 1.9e-21 107.1 202 36.6
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 7.3e-21 105.1 250 30.4
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 3.6e-12 76.3 61 60.7
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 1.8e-11 73.9 49 67.3
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 5.2e-11 72.4 49 65.3
SEGI_15131 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 3.2e-08 63.2 34 76.5
MCO03G036 Micromonas commoda HOM05D037152 ORTHO05D034124 6.0e-07 58.9 153 31.4


User provided reference genes

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